RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 PRXQ9BXM0 1461 aa24.02■■□□□ 1.43
SUPT4H1-201ENST00000225504 EEA1Q15075 1411 aa24.01■■□□□ 1.43
SUPT4H1-201ENST00000225504 JPH4Q96JJ6 628 aa23.98■■□□□ 1.43
SUPT4H1-201ENST00000225504 KIAA0586Q9BVV6 1533 aa23.96■■□□□ 1.43
SUPT4H1-201ENST00000225504 ERCC6L2Q5T890 1561 aa23.93■■□□□ 1.42
SUPT4H1-201ENST00000225504 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
SUPT4H1-201ENST00000225504 CYB5RLQ6IPT4 315 aa23.91■■□□□ 1.42
SUPT4H1-201ENST00000225504 PRG4Q92954 1404 aaPredicted RBP23.88■■□□□ 1.41
SUPT4H1-201ENST00000225504 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
SUPT4H1-201ENST00000225504 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
SUPT4H1-201ENST00000225504 IQGAP2Q13576 1575 aa23.81■■□□□ 1.4
SUPT4H1-201ENST00000225504 KIF21BO75037 1637 aa23.77■■□□□ 1.4
SUPT4H1-201ENST00000225504 CTTNBP2Q8WZ74 1663 aa23.76■■□□□ 1.39
SUPT4H1-201ENST00000225504 UGGT2Q9NYU1 1516 aa23.7■■□□□ 1.39
SUPT4H1-201ENST00000225504 DISP1Q96F81 1524 aa23.7■■□□□ 1.38
SUPT4H1-201ENST00000225504 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
SUPT4H1-201ENST00000225504 TTBK1Q5TCY1 1321 aaPredicted RBP23.68■■□□□ 1.38
SUPT4H1-201ENST00000225504 CARMIL2Q6F5E8 1435 aa23.67■■□□□ 1.38
SUPT4H1-201ENST00000225504 RANGAP1P46060 587 aaPredicted RBP23.66■■□□□ 1.38
SUPT4H1-201ENST00000225504 GOLGA3Q08378 1498 aa23.66■■□□□ 1.38
SUPT4H1-201ENST00000225504 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
SUPT4H1-201ENST00000225504 PTPRGP23470 1445 aa23.61■■□□□ 1.37
SUPT4H1-201ENST00000225504 P3H3Q8IVL6 736 aa23.61■■□□□ 1.37
SUPT4H1-201ENST00000225504 KIAA0556O60303 1618 aa23.59■■□□□ 1.37
SUPT4H1-201ENST00000225504 LOC105371045A0A1W2PR82 267 aa23.49■■□□□ 1.35
SUPT4H1-201ENST00000225504 SAMD9Q5K651 1589 aa23.49■■□□□ 1.35
SUPT4H1-201ENST00000225504 ADCY10Q96PN6 1610 aa23.47■■□□□ 1.35
SUPT4H1-201ENST00000225504 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
SUPT4H1-201ENST00000225504 FHOD3Q2V2M9 1422 aa23.43■■□□□ 1.34
SUPT4H1-201ENST00000225504 PLB1Q6P1J6 1458 aa23.42■■□□□ 1.34
SUPT4H1-201ENST00000225504 NPM1P06748 294 aaKnown RBP eCLIP23.39■■□□□ 1.34
SUPT4H1-201ENST00000225504 UHRF1BP1LA0JNW5 1464 aa23.38■■□□□ 1.33
SUPT4H1-201ENST00000225504 ARHGAP35Q9NRY4 1499 aa23.37■■□□□ 1.33
SUPT4H1-201ENST00000225504 EFCAB5A4FU69 1503 aa23.37■■□□□ 1.33
SUPT4H1-201ENST00000225504 ABCC2Q92887 1545 aa23.36■■□□□ 1.33
SUPT4H1-201ENST00000225504 ABCA8O94911 1581 aa23.35■■□□□ 1.33
SUPT4H1-201ENST00000225504 TRHP20396 242 aaPredicted RBP23.35■■□□□ 1.33
SUPT4H1-201ENST00000225504 ARID3CA6NKF2 412 aa23.3■■□□□ 1.32
SUPT4H1-201ENST00000225504 KDM5BQ9UGL1 1544 aa23.29■■□□□ 1.32
SUPT4H1-201ENST00000225504 CLIP1P30622 1438 aa23.27■■□□□ 1.32
SUPT4H1-201ENST00000225504 ZCCHC11Q5TAX3 1644 aaKnown RBP23.24■■□□□ 1.31
SUPT4H1-201ENST00000225504 RAPGEF6Q8TEU7 1601 aa23.24■■□□□ 1.31
SUPT4H1-201ENST00000225504 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
SUPT4H1-201ENST00000225504 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
SUPT4H1-201ENST00000225504 ASXL2Q76L83 1435 aa23.21■■□□□ 1.31
SUPT4H1-201ENST00000225504 ATP10BO94823 1461 aa23.21■■□□□ 1.31
SUPT4H1-201ENST00000225504 NUP153P49790 1475 aaKnown RBP23.19■■□□□ 1.3
SUPT4H1-201ENST00000225504 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
SUPT4H1-201ENST00000225504 FMN1Q68DA7 1419 aa23.19■■□□□ 1.3
SUPT4H1-201ENST00000225504 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
SUPT4H1-201ENST00000225504 FAM69CQ0P6D2 419 aa23.17■■□□□ 1.3
SUPT4H1-201ENST00000225504 ABCC10Q5T3U5 1492 aa23.16■■□□□ 1.3
SUPT4H1-201ENST00000225504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.14■■□□□ 1.29
SUPT4H1-201ENST00000225504 HNRNPUL2Q1KMD3 747 aaKnown RBP23.14■■□□□ 1.29
SUPT4H1-201ENST00000225504 KIF13AQ9H1H9 1805 aa23.14■■□□□ 1.29
SUPT4H1-201ENST00000225504 DIP2BQ9P265 1576 aa23.11■■□□□ 1.29
SUPT4H1-201ENST00000225504 KCNH8Q96L42 1107 aa23.11■■□□□ 1.29
SUPT4H1-201ENST00000225504 WDR7Q9Y4E6 1490 aa23.07■■□□□ 1.28
SUPT4H1-201ENST00000225504 CDK13Q14004 1512 aaKnown RBP23.07■■□□□ 1.28
SUPT4H1-201ENST00000225504 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
SUPT4H1-201ENST00000225504 CASKIN1Q8WXD9 1431 aa23.06■■□□□ 1.28
SUPT4H1-201ENST00000225504 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
SUPT4H1-201ENST00000225504 HECW1Q76N89 1606 aa23.03■■□□□ 1.28
SUPT4H1-201ENST00000225504 LRRIQ1Q96JM4 1722 aa23.02■■□□□ 1.28
SUPT4H1-201ENST00000225504 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
SUPT4H1-201ENST00000225504 GLI2P10070 1586 aa22.99■■□□□ 1.27
SUPT4H1-201ENST00000225504 FYCO1Q9BQS8 1478 aa22.97■■□□□ 1.27
SUPT4H1-201ENST00000225504 TSPOAP1O95153 1857 aa22.97■■□□□ 1.27
SUPT4H1-201ENST00000225504 MAP3K4Q9Y6R4 1608 aa22.91■■□□□ 1.26
SUPT4H1-201ENST00000225504 CDK11AQ9UQ88 783 aaPredicted RBP22.91■■□□□ 1.26
SUPT4H1-201ENST00000225504 CD109Q6YHK3 1445 aa22.89■■□□□ 1.26
SUPT4H1-201ENST00000225504 VPS8Q8N3P4 1428 aa22.89■■□□□ 1.26
SUPT4H1-201ENST00000225504 CCDC18Q5T9S5 1454 aa22.89■■□□□ 1.25
SUPT4H1-201ENST00000225504 PPRC1Q5VV67 1664 aaKnown RBP22.88■■□□□ 1.25
SUPT4H1-201ENST00000225504 MAGI3Q5TCQ9 1506 aa22.86■■□□□ 1.25
SUPT4H1-201ENST00000225504 ABCA9Q8IUA7 1624 aa22.85■■□□□ 1.25
SUPT4H1-201ENST00000225504 TROQ12816 1431 aaPredicted RBP22.85■■□□□ 1.25
SUPT4H1-201ENST00000225504 CFAP43Q8NDM7 1665 aa22.84■■□□□ 1.25
SUPT4H1-201ENST00000225504 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.82■■□□□ 1.243e-6■■□□□ 14.1
SUPT4H1-201ENST00000225504 KIF14Q15058 1648 aa22.8■■□□□ 1.24
SUPT4H1-201ENST00000225504 TTC37Q6PGP7 1564 aa22.78■■□□□ 1.24
SUPT4H1-201ENST00000225504 TEX14Q8IWB6 1497 aa22.75■■□□□ 1.23
SUPT4H1-201ENST00000225504 COL17A1Q9UMD9 1497 aaPredicted RBP22.74■■□□□ 1.23
SUPT4H1-201ENST00000225504 MTUS2Q5JR59 1369 aa22.73■■□□□ 1.23
SUPT4H1-201ENST00000225504 KANK4Q5T7N3 995 aaPredicted RBP22.72■■□□□ 1.23
SUPT4H1-201ENST00000225504 TIAM1Q13009 1591 aa22.71■■□□□ 1.23
SUPT4H1-201ENST00000225504 PLCH2O75038 1416 aa22.69■■□□□ 1.22
SUPT4H1-201ENST00000225504 KDM6BO15054 1643 aa22.69■■□□□ 1.22
SUPT4H1-201ENST00000225504 FANCAO15360 1455 aa22.65■■□□□ 1.22
SUPT4H1-201ENST00000225504 MAP3K1Q13233 1512 aa22.64■■□□□ 1.22
SUPT4H1-201ENST00000225504 LRRC9Q6ZRR7 1453 aa22.64■■□□□ 1.21
SUPT4H1-201ENST00000225504 APLP2Q06481 763 aa22.64■■□□□ 1.21
SUPT4H1-201ENST00000225504 MYO5CQ9NQX4 1742 aa22.64■■□□□ 1.21
SUPT4H1-201ENST00000225504 EHBP1L1Q8N3D4 1523 aa22.64■■□□□ 1.21
SUPT4H1-201ENST00000225504 NEO1Q92859 1461 aa22.63■■□□□ 1.21
SUPT4H1-201ENST00000225504 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
SUPT4H1-201ENST00000225504 EFCAB2Q5VUJ9 269 aa22.62■■□□□ 1.21
SUPT4H1-201ENST00000225504 ARAP3Q8WWN8 1544 aa22.61■■□□□ 1.21
SUPT4H1-201ENST00000225504 CDC42BPBQ9Y5S2 1711 aa22.6■■□□□ 1.21
SUPT4H1-201ENST00000225504 PHLDB1Q86UU1 1377 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms