RNA–Protein interactions for RNA: ENST00000223215.8

MEST-201, mesoderm specific transcript, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MEST, Length 2,465 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-201ENST00000223215 TARBP1Q13395 1621 aaKnown RBP27.5■■□□□ 1.99
MEST-201ENST00000223215 FHOD3Q2V2M9 1422 aa27.46■■□□□ 1.99
MEST-201ENST00000223215 ERCC6Q03468 1493 aa27.44■■□□□ 1.98
MEST-201ENST00000223215 CTTNBP2Q8WZ74 1663 aa27.39■■□□□ 1.97
MEST-201ENST00000223215 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
MEST-201ENST00000223215 FHAD1B1AJZ9 1412 aa27.34■■□□□ 1.97
MEST-201ENST00000223215 ITGAEP38570 1179 aa27.32■■□□□ 1.96
MEST-201ENST00000223215 PBRM1Q86U86 1689 aa27.3■■□□□ 1.96
MEST-201ENST00000223215 WDR62O43379 1518 aa27.3■■□□□ 1.96
MEST-201ENST00000223215 PCF11O94913 1555 aaKnown RBP27.28■■□□□ 1.96
MEST-201ENST00000223215 TIAM1Q13009 1591 aa27.28■■□□□ 1.96
MEST-201ENST00000223215 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
MEST-201ENST00000223215 EFCAB5A4FU69 1503 aa27.26■■□□□ 1.95
MEST-201ENST00000223215 GRIN2BQ13224 1484 aa27.24■■□□□ 1.95
MEST-201ENST00000223215 LRRC9Q6ZRR7 1453 aa27.21■■□□□ 1.95
MEST-201ENST00000223215 CCNB3Q8WWL7 1395 aa27.19■■□□□ 1.94
MEST-201ENST00000223215 RRBP1Q9P2E9 1410 aaKnown RBP27.19■■□□□ 1.94
MEST-201ENST00000223215 FMN1Q68DA7 1419 aa27.16■■□□□ 1.94
MEST-201ENST00000223215 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
MEST-201ENST00000223215 CASKIN1Q8WXD9 1431 aa27.16■■□□□ 1.94
MEST-201ENST00000223215 MAP3K1Q13233 1512 aa27.16■■□□□ 1.94
MEST-201ENST00000223215 FYCO1Q9BQS8 1478 aa27.14■■□□□ 1.93
MEST-201ENST00000223215 PHLDB1Q86UU1 1377 aa27.12■■□□□ 1.93
MEST-201ENST00000223215 FBLN2P98095 1184 aa27.12■■□□□ 1.93
MEST-201ENST00000223215 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
MEST-201ENST00000223215 FAM50AQ14320 339 aaKnown RBP27.11■■□□□ 1.93
MEST-201ENST00000223215 SAMD9Q5K651 1589 aa27.1■■□□□ 1.93
MEST-201ENST00000223215 SNAPC4Q5SXM2 1469 aa27.1■■□□□ 1.93
MEST-201ENST00000223215 EIF4G3O43432 1585 aaKnown RBP27.09■■□□□ 1.93
MEST-201ENST00000223215 CFAP43Q8NDM7 1665 aa27.07■■□□□ 1.92
MEST-201ENST00000223215 DIEXFQ68CQ4 756 aaKnown RBP27.06■■□□□ 1.92
MEST-201ENST00000223215 ARID3CA6NKF2 412 aa27.06■■□□□ 1.92
MEST-201ENST00000223215 IQGAP2Q13576 1575 aa27.05■■□□□ 1.92
MEST-201ENST00000223215 CHMP7Q8WUX9 453 aaPredicted RBP27.04■■□□□ 1.92
MEST-201ENST00000223215 MTUS2Q5JR59 1369 aa27■■□□□ 1.91
MEST-201ENST00000223215 SCAF1Q9H7N4 1312 aaKnown RBP26.95■■□□□ 1.91
MEST-201ENST00000223215 GRIN2AQ12879 1464 aa26.95■■□□□ 1.9
MEST-201ENST00000223215 LRRIQ1Q96JM4 1722 aa26.94■■□□□ 1.9
MEST-201ENST00000223215 DHX57Q6P158 1386 aaKnown RBP26.92■■□□□ 1.9
MEST-201ENST00000223215 KIAA0586Q9BVV6 1533 aa26.89■■□□□ 1.89
MEST-201ENST00000223215 ZNF316A6NFI3 1004 aaPredicted RBP26.87■■□□□ 1.89
MEST-201ENST00000223215 MAGI1Q96QZ7 1491 aaPredicted RBP26.86■■□□□ 1.89
MEST-201ENST00000223215 RAB3GAP2Q9H2M9 1393 aa26.85■■□□□ 1.89
MEST-201ENST00000223215 SYNJ2O15056 1496 aa26.83■■□□□ 1.89
MEST-201ENST00000223215 UGGT2Q9NYU1 1516 aa26.83■■□□□ 1.89
MEST-201ENST00000223215 DISP1Q96F81 1524 aa26.8■■□□□ 1.88
MEST-201ENST00000223215 NCOA2Q15596 1464 aa26.79■■□□□ 1.88
MEST-201ENST00000223215 CDK13Q14004 1512 aaKnown RBP26.78■■□□□ 1.88
MEST-201ENST00000223215 FGD6Q6ZV73 1430 aa26.78■■□□□ 1.88
MEST-201ENST00000223215 CEP170Q5SW79 1584 aa26.78■■□□□ 1.88
MEST-201ENST00000223215 MAGI3Q5TCQ9 1506 aa26.77■■□□□ 1.88
MEST-201ENST00000223215 NEUROD1Q13562 356 aa26.77■■□□□ 1.88
MEST-201ENST00000223215 EPRSP07814 1512 aaKnown RBP26.76■■□□□ 1.87
MEST-201ENST00000223215 SETD5Q9C0A6 1442 aa26.76■■□□□ 1.87
MEST-201ENST00000223215 HECW1Q76N89 1606 aa26.75■■□□□ 1.87
MEST-201ENST00000223215 JPH4Q96JJ6 628 aa26.75■■□□□ 1.87
MEST-201ENST00000223215 KIAA0556O60303 1618 aa26.75■■□□□ 1.87
MEST-201ENST00000223215 CCDC18Q5T9S5 1454 aa26.74■■□□□ 1.87
MEST-201ENST00000223215 EHBP1L1Q8N3D4 1523 aa26.71■■□□□ 1.87
MEST-201ENST00000223215 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
MEST-201ENST00000223215 CLSPNQ9HAW4 1339 aa26.7■■□□□ 1.87
MEST-201ENST00000223215 MYOM3Q5VTT5 1437 aa26.69■■□□□ 1.86
MEST-201ENST00000223215 ACIN1Q9UKV3 1341 aaKnown RBP26.67■■□□□ 1.86
MEST-201ENST00000223215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.64■■□□□ 1.854e-6■■■■□ 19.5
MEST-201ENST00000223215 NUP160Q12769 1436 aa26.63■■□□□ 1.85
MEST-201ENST00000223215 PTPRKQ15262 1439 aa26.62■■□□□ 1.85
MEST-201ENST00000223215 CHIC2Q9UKJ5 165 aa26.61■■□□□ 1.85
MEST-201ENST00000223215 NUP153P49790 1475 aaKnown RBP26.6■■□□□ 1.85
MEST-201ENST00000223215 PLB1Q6P1J6 1458 aa26.6■■□□□ 1.85
MEST-201ENST00000223215 CARMIL2Q6F5E8 1435 aa26.59■■□□□ 1.85
MEST-201ENST00000223215 MIER1Q8N108 512 aa26.58■■□□□ 1.85
MEST-201ENST00000223215 YTHDC1Q96MU7 727 aaKnown RBP26.58■■□□□ 1.85
MEST-201ENST00000223215 RAPGEF6Q8TEU7 1601 aa26.58■■□□□ 1.84
MEST-201ENST00000223215 PTPN23Q9H3S7 1636 aa26.55■■□□□ 1.84
MEST-201ENST00000223215 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
MEST-201ENST00000223215 SIN3AQ96ST3 1273 aa26.54■■□□□ 1.84
MEST-201ENST00000223215 CDK11AQ9UQ88 783 aaPredicted RBP26.54■■□□□ 1.84
MEST-201ENST00000223215 RRP7BPQ9NSQ0 103 aa26.53■■□□□ 1.84
MEST-201ENST00000223215 MAPKBP1O60336 1514 aa26.52■■□□□ 1.84
MEST-201ENST00000223215 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
MEST-201ENST00000223215 ZNF644Q9H582 1327 aaPredicted RBP26.46■■□□□ 1.83
MEST-201ENST00000223215 CENPBP07199 599 aaPredicted RBP26.46■■□□□ 1.83
MEST-201ENST00000223215 GTF3C3Q9Y5Q9 886 aa26.45■■□□□ 1.82
MEST-201ENST00000223215 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
MEST-201ENST00000223215 CHD1O14646 1710 aa26.43■■□□□ 1.82
MEST-201ENST00000223215 NAIPQ13075 1403 aa26.42■■□□□ 1.82
MEST-201ENST00000223215 ZNF777Q9ULD5 760 aaPredicted RBP26.4■■□□□ 1.82
MEST-201ENST00000223215 TCOF1Q13428 1488 aaKnown RBP26.39■■□□□ 1.81
MEST-201ENST00000223215 MIA2Q96PC5 1412 aa26.39■■□□□ 1.81
MEST-201ENST00000223215 TROQ12816 1431 aaPredicted RBP26.36■■□□□ 1.81
MEST-201ENST00000223215 PLEKHD1A6NEE1 506 aa26.36■■□□□ 1.81
MEST-201ENST00000223215 PTPRGP23470 1445 aa26.35■■□□□ 1.81
MEST-201ENST00000223215 TRIM52Q96A61 297 aa26.34■■□□□ 1.81
MEST-201ENST00000223215 CFDP1Q9UEE9 299 aaPredicted RBP26.34■■□□□ 1.81
MEST-201ENST00000223215 KIF14Q15058 1648 aa26.29■■□□□ 1.8
MEST-201ENST00000223215 UACAQ9BZF9 1416 aa26.29■■□□□ 1.8
MEST-201ENST00000223215 ATP10BO94823 1461 aa26.29■■□□□ 1.8
MEST-201ENST00000223215 ABCA8O94911 1581 aa26.28■■□□□ 1.8
MEST-201ENST00000223215 DAPK1P53355 1430 aa26.25■■□□□ 1.79
MEST-201ENST00000223215 ABCC5O15440 1437 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms