RNA–Protein interactions for RNA: ENST00000221954.6

CEACAM4-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEACAM4, Length 1,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4-201ENST00000221954 KIAA0586Q9BVV6 1533 aa35.27■■■■□ 3.24
CEACAM4-201ENST00000221954 ERCC6L2Q5T890 1561 aa35.25■■■■□ 3.23
CEACAM4-201ENST00000221954 PRG4Q92954 1404 aaPredicted RBP35.23■■■■□ 3.23
CEACAM4-201ENST00000221954 RAPGEF2Q9Y4G8 1499 aa35.22■■■■□ 3.23
CEACAM4-201ENST00000221954 IQGAP2Q13576 1575 aa35.08■■■■□ 3.21
CEACAM4-201ENST00000221954 CHIC1Q5VXU3 224 aa35.04■■■■□ 3.2
CEACAM4-201ENST00000221954 EEA1Q15075 1411 aa35.04■■■■□ 3.2
CEACAM4-201ENST00000221954 PRXQ9BXM0 1461 aa35.03■■■■□ 3.2
CEACAM4-201ENST00000221954 CSRNP3Q8WYN3 585 aa34.99■■■■□ 3.19
CEACAM4-201ENST00000221954 CARMIL2Q6F5E8 1435 aa34.95■■■■□ 3.19
CEACAM4-201ENST00000221954 CTTNBP2Q8WZ74 1663 aa34.93■■■■□ 3.18
CEACAM4-201ENST00000221954 TRHP20396 242 aaPredicted RBP34.87■■■■□ 3.17
CEACAM4-201ENST00000221954 FAM9AQ8IZU1 332 aaPredicted RBP34.87■■■■□ 3.17
CEACAM4-201ENST00000221954 UGGT2Q9NYU1 1516 aa34.84■■■■□ 3.17
CEACAM4-201ENST00000221954 TNIKQ9UKE5 1360 aa34.8■■■■□ 3.16
CEACAM4-201ENST00000221954 PTPRGP23470 1445 aa34.8■■■■□ 3.16
CEACAM4-201ENST00000221954 DISP1Q96F81 1524 aa34.78■■■■□ 3.16
CEACAM4-201ENST00000221954 TTBK1Q5TCY1 1321 aaPredicted RBP34.76■■■■□ 3.15
CEACAM4-201ENST00000221954 KIAA0556O60303 1618 aa34.71■■■■□ 3.15
CEACAM4-201ENST00000221954 NPM1P06748 294 aaKnown RBP eCLIP34.71■■■■□ 3.15
CEACAM4-201ENST00000221954 GOLGA3Q08378 1498 aa34.7■■■■□ 3.15
CEACAM4-201ENST00000221954 ADCY10Q96PN6 1610 aa34.7■■■■□ 3.14
CEACAM4-201ENST00000221954 KIF21BO75037 1637 aa34.66■■■■□ 3.14
CEACAM4-201ENST00000221954 UACAQ9BZF9 1416 aa34.55■■■■□ 3.12
CEACAM4-201ENST00000221954 UHRF1BP1LA0JNW5 1464 aa34.52■■■■□ 3.12
CEACAM4-201ENST00000221954 MAPKBP1O60336 1514 aa34.51■■■■□ 3.12
CEACAM4-201ENST00000221954 ABCC2Q92887 1545 aa34.5■■■■□ 3.11
CEACAM4-201ENST00000221954 EHMT2Q96KQ7 1210 aa34.44■■■■□ 3.1
CEACAM4-201ENST00000221954 SAMD9Q5K651 1589 aa34.42■■■■□ 3.1
CEACAM4-201ENST00000221954 UBTFP17480 764 aaKnown RBP34.42■■■■□ 3.1
CEACAM4-201ENST00000221954 P3H3Q8IVL6 736 aa34.42■■■■□ 3.1
CEACAM4-201ENST00000221954 RANGAP1P46060 587 aaPredicted RBP34.41■■■■□ 3.1
CEACAM4-201ENST00000221954 KIF13AQ9H1H9 1805 aa34.39■■■■□ 3.1
CEACAM4-201ENST00000221954 PLB1Q6P1J6 1458 aa34.38■■■■□ 3.09
CEACAM4-201ENST00000221954 ABCC10Q5T3U5 1492 aa34.36■■■■□ 3.09
CEACAM4-201ENST00000221954 KDM5BQ9UGL1 1544 aa34.34■■■■□ 3.09
CEACAM4-201ENST00000221954 FAM69CQ0P6D2 419 aa34.33■■■■□ 3.09
CEACAM4-201ENST00000221954 ABCA8O94911 1581 aa34.32■■■■□ 3.09
CEACAM4-201ENST00000221954 DIP2BQ9P265 1576 aa34.32■■■■□ 3.08
CEACAM4-201ENST00000221954 ZCCHC11Q5TAX3 1644 aaKnown RBP34.3■■■■□ 3.08
CEACAM4-201ENST00000221954 ASXL2Q76L83 1435 aa34.3■■■■□ 3.08
CEACAM4-201ENST00000221954 EFCAB5A4FU69 1503 aa34.29■■■■□ 3.08
CEACAM4-201ENST00000221954 FHOD3Q2V2M9 1422 aa34.21■■■■□ 3.07
CEACAM4-201ENST00000221954 RAPGEF6Q8TEU7 1601 aa34.15■■■■□ 3.06
CEACAM4-201ENST00000221954 WDR7Q9Y4E6 1490 aa34.1■■■■□ 3.05
CEACAM4-201ENST00000221954 GLI2P10070 1586 aa34.1■■■■□ 3.05
CEACAM4-201ENST00000221954 ARID3CA6NKF2 412 aa34.07■■■■□ 3.04
CEACAM4-201ENST00000221954 EPRSP07814 1512 aaKnown RBP34.07■■■■□ 3.04
CEACAM4-201ENST00000221954 TSPOAP1O95153 1857 aa34.07■■■■□ 3.04
CEACAM4-201ENST00000221954 ATP10BO94823 1461 aa34.04■■■■□ 3.04
CEACAM4-201ENST00000221954 ARHGAP35Q9NRY4 1499 aa34.04■■■■□ 3.04
CEACAM4-201ENST00000221954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.99■■■■□ 3.03
CEACAM4-201ENST00000221954 HNRNPUL2Q1KMD3 747 aaKnown RBP33.99■■■■□ 3.03
CEACAM4-201ENST00000221954 NUP153P49790 1475 aaKnown RBP33.99■■■■□ 3.03
CEACAM4-201ENST00000221954 FMN1Q68DA7 1419 aa33.98■■■■□ 3.03
CEACAM4-201ENST00000221954 KCNH8Q96L42 1107 aa33.97■■■■□ 3.03
CEACAM4-201ENST00000221954 MAP3K4Q9Y6R4 1608 aa33.94■■■■□ 3.02
CEACAM4-201ENST00000221954 PPRC1Q5VV67 1664 aaKnown RBP33.87■■■■□ 3.01
CEACAM4-201ENST00000221954 CFAP43Q8NDM7 1665 aa33.86■■■■□ 3.01
CEACAM4-201ENST00000221954 ATP1B4Q9UN42 357 aaPredicted RBP33.85■■■■□ 3.01
CEACAM4-201ENST00000221954 TEX14Q8IWB6 1497 aa33.84■■■■□ 3.01
CEACAM4-201ENST00000221954 KDM6BO15054 1643 aa33.84■■■■□ 3.01
CEACAM4-201ENST00000221954 HECW1Q76N89 1606 aa33.84■■■■□ 3.01
CEACAM4-201ENST00000221954 CLIP1P30622 1438 aa33.84■■■■□ 3.01
CEACAM4-201ENST00000221954 CD109Q6YHK3 1445 aa33.81■■■■□ 3
CEACAM4-201ENST00000221954 PLEKHD1A6NEE1 506 aa33.8■■■■□ 3
CEACAM4-201ENST00000221954 CDK13Q14004 1512 aaKnown RBP33.75■■■□□ 2.99
CEACAM4-201ENST00000221954 MAGI3Q5TCQ9 1506 aa33.73■■■□□ 2.99
CEACAM4-201ENST00000221954 ABCA9Q8IUA7 1624 aa33.72■■■□□ 2.99
CEACAM4-201ENST00000221954 CDK11AQ9UQ88 783 aaPredicted RBP33.67■■■□□ 2.98
CEACAM4-201ENST00000221954 PCF11O94913 1555 aaKnown RBP33.67■■■□□ 2.98
CEACAM4-201ENST00000221954 CASKIN1Q8WXD9 1431 aa33.66■■■□□ 2.98
CEACAM4-201ENST00000221954 CEP162Q5TB80 1403 aa33.64■■■□□ 2.98
CEACAM4-201ENST00000221954 LOC105371045A0A1W2PR82 267 aa33.61■■■□□ 2.97
CEACAM4-201ENST00000221954 FYCO1Q9BQS8 1478 aa33.6■■■□□ 2.97
CEACAM4-201ENST00000221954 CCDC18Q5T9S5 1454 aa33.58■■■□□ 2.97
CEACAM4-201ENST00000221954 LRRIQ1Q96JM4 1722 aa33.58■■■□□ 2.97
CEACAM4-201ENST00000221954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.54■■■□□ 2.96
CEACAM4-201ENST00000221954 COL17A1Q9UMD9 1497 aaPredicted RBP33.54■■■□□ 2.96
CEACAM4-201ENST00000221954 PHLDB1Q86UU1 1377 aa33.51■■■□□ 2.96
CEACAM4-201ENST00000221954 TTC37Q6PGP7 1564 aa33.5■■■□□ 2.95
CEACAM4-201ENST00000221954 TROQ12816 1431 aaPredicted RBP33.49■■■□□ 2.95
CEACAM4-201ENST00000221954 NEO1Q92859 1461 aa33.48■■■□□ 2.95
CEACAM4-201ENST00000221954 KIF14Q15058 1648 aa33.47■■■□□ 2.95
CEACAM4-201ENST00000221954 ARAP3Q8WWN8 1544 aa33.44■■■□□ 2.94
CEACAM4-201ENST00000221954 CFAP74Q9C0B2 1584 aa33.43■■■□□ 2.94
CEACAM4-201ENST00000221954 FANCAO15360 1455 aa33.39■■■□□ 2.94
CEACAM4-201ENST00000221954 MYO5CQ9NQX4 1742 aa33.37■■■□□ 2.93
CEACAM4-201ENST00000221954 PLCH2O75038 1416 aa33.35■■■□□ 2.93
CEACAM4-201ENST00000221954 AKNAQ7Z591 1439 aa33.32■■■□□ 2.92
CEACAM4-201ENST00000221954 RAPGEF3O95398 923 aa33.27■■■□□ 2.92
CEACAM4-201ENST00000221954 EFCAB2Q5VUJ9 269 aa33.26■■■□□ 2.91
CEACAM4-201ENST00000221954 AEBP2Q6ZN18 517 aaPredicted RBP33.25■■■□□ 2.91
CEACAM4-201ENST00000221954 VPS8Q8N3P4 1428 aa33.25■■■□□ 2.91
CEACAM4-201ENST00000221954 DENND4BO75064 1496 aaPredicted RBP33.25■■■□□ 2.91
CEACAM4-201ENST00000221954 MTUS2Q5JR59 1369 aa33.24■■■□□ 2.91
CEACAM4-201ENST00000221954 ARHGAP5Q13017 1502 aa33.23■■■□□ 2.91
CEACAM4-201ENST00000221954 ADGRL1O94910 1474 aa33.21■■■□□ 2.91
CEACAM4-201ENST00000221954 FRMPD1Q5SYB0 1578 aa33.19■■■□□ 2.9
CEACAM4-201ENST00000221954 PREX2Q70Z35 1606 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms