RNA–Protein interactions for RNA: ENST00000221431.10

SARS2-201, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SARS2, Length 2,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-201ENST00000221431 ERCC6Q03468 1493 aa24.21■■□□□ 1.47
SARS2-201ENST00000221431 DNMBPQ6XZF7 1577 aa24.18■■□□□ 1.46
SARS2-201ENST00000221431 TIAM1Q13009 1591 aa24.17■■□□□ 1.46
SARS2-201ENST00000221431 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
SARS2-201ENST00000221431 IGF1RP08069 1367 aa24.16■■□□□ 1.46
SARS2-201ENST00000221431 ITGAEP38570 1179 aa24.16■■□□□ 1.46
SARS2-201ENST00000221431 RAB3GAP2Q9H2M9 1393 aa24.16■■□□□ 1.46
SARS2-201ENST00000221431 SUPT16HQ9Y5B9 1047 aaKnown RBP24.14■■□□□ 1.45
SARS2-201ENST00000221431 MRC2Q9UBG0 1479 aa24.12■■□□□ 1.45
SARS2-201ENST00000221431 MAPKBP1O60336 1514 aa24.11■■□□□ 1.45
SARS2-201ENST00000221431 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
SARS2-201ENST00000221431 SETD5Q9C0A6 1442 aa24.09■■□□□ 1.45
SARS2-201ENST00000221431 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.45
SARS2-201ENST00000221431 CARMIL1Q5VZK9 1371 aa24.08■■□□□ 1.45
SARS2-201ENST00000221431 LRRC9Q6ZRR7 1453 aa24.08■■□□□ 1.44
SARS2-201ENST00000221431 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
SARS2-201ENST00000221431 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
SARS2-201ENST00000221431 WDR62O43379 1518 aa24.02■■□□□ 1.44
SARS2-201ENST00000221431 PHLDB1Q86UU1 1377 aa23.99■■□□□ 1.43
SARS2-201ENST00000221431 CFAP43Q8NDM7 1665 aa23.97■■□□□ 1.43
SARS2-201ENST00000221431 TIMELESSQ9UNS1 1208 aa23.95■■□□□ 1.42
SARS2-201ENST00000221431 FAM50AQ14320 339 aaKnown RBP23.93■■□□□ 1.42
SARS2-201ENST00000221431 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
SARS2-201ENST00000221431 PCF11O94913 1555 aaKnown RBP23.91■■□□□ 1.42
SARS2-201ENST00000221431 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
SARS2-201ENST00000221431 KCNH8Q96L42 1107 aa23.87■■□□□ 1.41
SARS2-201ENST00000221431 SIN3AQ96ST3 1273 aa23.87■■□□□ 1.41
SARS2-201ENST00000221431 TARBP1Q13395 1621 aaKnown RBP23.87■■□□□ 1.41
SARS2-201ENST00000221431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.86■■□□□ 1.41
SARS2-201ENST00000221431 TDRD9Q8NDG6 1382 aaKnown RBP23.85■■□□□ 1.41
SARS2-201ENST00000221431 FYCO1Q9BQS8 1478 aa23.84■■□□□ 1.41
SARS2-201ENST00000221431 DDX10Q13206 875 aaKnown RBP23.83■■□□□ 1.41
SARS2-201ENST00000221431 EFCAB5A4FU69 1503 aa23.82■■□□□ 1.4
SARS2-201ENST00000221431 P3H3Q8IVL6 736 aa23.82■■□□□ 1.4
SARS2-201ENST00000221431 TSHZ2Q9NRE2 1034 aa23.81■■□□□ 1.4
SARS2-201ENST00000221431 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.45e-9■□□□□ 10.4
SARS2-201ENST00000221431 ATP1B4Q9UN42 357 aaPredicted RBP23.8■■□□□ 1.4
SARS2-201ENST00000221431 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
SARS2-201ENST00000221431 CASKIN1Q8WXD9 1431 aa23.8■■□□□ 1.4
SARS2-201ENST00000221431 PPP1R15AO75807 674 aaPredicted RBP23.8■■□□□ 1.4
SARS2-201ENST00000221431 FHOD3Q2V2M9 1422 aa23.78■■□□□ 1.4
SARS2-201ENST00000221431 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
SARS2-201ENST00000221431 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
SARS2-201ENST00000221431 CCER2I3L3R5 266 aa23.72■■□□□ 1.39
SARS2-201ENST00000221431 CUL7Q14999 1698 aa23.71■■□□□ 1.39
SARS2-201ENST00000221431 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
SARS2-201ENST00000221431 CTTNBP2Q8WZ74 1663 aa23.69■■□□□ 1.38
SARS2-201ENST00000221431 FMN1Q68DA7 1419 aa23.68■■□□□ 1.38
SARS2-201ENST00000221431 FGD6Q6ZV73 1430 aa23.68■■□□□ 1.38
SARS2-201ENST00000221431 ANP32CO43423 234 aa23.68■■□□□ 1.38
SARS2-201ENST00000221431 FKBP8Q14318 412 aa23.66■■□□□ 1.38
SARS2-201ENST00000221431 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
SARS2-201ENST00000221431 TONSLQ96HA7 1378 aa23.64■■□□□ 1.37
SARS2-201ENST00000221431 CCDC18Q5T9S5 1454 aa23.62■■□□□ 1.37
SARS2-201ENST00000221431 HIRIP3Q9BW71 556 aaPredicted RBP23.61■■□□□ 1.37
SARS2-201ENST00000221431 HFM1A2PYH4 1435 aa23.6■■□□□ 1.37
SARS2-201ENST00000221431 UACAQ9BZF9 1416 aa23.6■■□□□ 1.37
SARS2-201ENST00000221431 NEFLP07196 543 aa23.6■■□□□ 1.37
SARS2-201ENST00000221431 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
SARS2-201ENST00000221431 BCANQ96GW7 911 aa23.6■■□□□ 1.37
SARS2-201ENST00000221431 PBRM1Q86U86 1689 aa23.59■■□□□ 1.37
SARS2-201ENST00000221431 MTUS2Q5JR59 1369 aa23.59■■□□□ 1.37
SARS2-201ENST00000221431 PTPN23Q9H3S7 1636 aa23.56■■□□□ 1.36
SARS2-201ENST00000221431 PTPRKQ15262 1439 aa23.53■■□□□ 1.36
SARS2-201ENST00000221431 ANP32EQ9BTT0 268 aa23.53■■□□□ 1.36
SARS2-201ENST00000221431 GRIN2BQ13224 1484 aa23.52■■□□□ 1.36
SARS2-201ENST00000221431 SAMD9Q5K651 1589 aa23.51■■□□□ 1.35
SARS2-201ENST00000221431 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
SARS2-201ENST00000221431 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
SARS2-201ENST00000221431 NAIPQ13075 1403 aa23.49■■□□□ 1.35
SARS2-201ENST00000221431 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
SARS2-201ENST00000221431 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
SARS2-201ENST00000221431 SUPT6HQ7KZ85 1726 aaKnown RBP23.47■■□□□ 1.35
SARS2-201ENST00000221431 LRRIQ1Q96JM4 1722 aa23.46■■□□□ 1.35
SARS2-201ENST00000221431 EHBP1L1Q8N3D4 1523 aa23.45■■□□□ 1.34
SARS2-201ENST00000221431 KDM5BQ9UGL1 1544 aa23.39■■□□□ 1.33
SARS2-201ENST00000221431 UGGT2Q9NYU1 1516 aa23.37■■□□□ 1.33
SARS2-201ENST00000221431 ARHGEF11O15085 1522 aa23.36■■□□□ 1.33
SARS2-201ENST00000221431 RBM19Q9Y4C8 960 aaKnown RBP23.34■■□□□ 1.33
SARS2-201ENST00000221431 MAGI1Q96QZ7 1491 aaPredicted RBP23.33■■□□□ 1.33
SARS2-201ENST00000221431 TCOF1Q13428 1488 aaKnown RBP23.33■■□□□ 1.32
SARS2-201ENST00000221431 FBLN2P98095 1184 aa23.32■■□□□ 1.32
SARS2-201ENST00000221431 GCC2Q8IWJ2 1684 aa23.31■■□□□ 1.32
SARS2-201ENST00000221431 HECW1Q76N89 1606 aa23.3■■□□□ 1.32
SARS2-201ENST00000221431 AKNAQ7Z591 1439 aa23.29■■□□□ 1.32
SARS2-201ENST00000221431 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
SARS2-201ENST00000221431 GRIN2AQ12879 1464 aa23.28■■□□□ 1.32
SARS2-201ENST00000221431 HSPA5P11021 654 aaKnown RBP23.28■■□□□ 1.32
SARS2-201ENST00000221431 HNRNPUQ00839 825 aaKnown RBP eCLIP23.28■■□□□ 1.32
SARS2-201ENST00000221431 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
SARS2-201ENST00000221431 MAGI3Q5TCQ9 1506 aa23.27■■□□□ 1.32
SARS2-201ENST00000221431 WASHC2AQ641Q2 1341 aa23.26■■□□□ 1.31
SARS2-201ENST00000221431 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
SARS2-201ENST00000221431 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.31
SARS2-201ENST00000221431 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
SARS2-201ENST00000221431 DENND4BO75064 1496 aaPredicted RBP23.23■■□□□ 1.31
SARS2-201ENST00000221431 MIA2Q96PC5 1412 aa23.21■■□□□ 1.31
SARS2-201ENST00000221431 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
SARS2-201ENST00000221431 CHD1O14646 1710 aa23.19■■□□□ 1.3
SARS2-201ENST00000221431 CNTLNQ9NXG0 1405 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms