RNA–Protein interactions for RNA: ENST00000221431.10

SARS2-201, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SARS2, Length 2,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-201ENST00000221431 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
SARS2-201ENST00000221431 CCDC180Q9P1Z9 1646 aa29.39■■■□□ 2.3
SARS2-201ENST00000221431 SHROOM4Q9ULL8 1493 aa28.99■■■□□ 2.23
SARS2-201ENST00000221431 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
SARS2-201ENST00000221431 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
SARS2-201ENST00000221431 ABCC9O60706 1549 aa28.3■■■□□ 2.12
SARS2-201ENST00000221431 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
SARS2-201ENST00000221431 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
SARS2-201ENST00000221431 MYO15BQ96JP2 1530 aa27.95■■■□□ 2.07
SARS2-201ENST00000221431 DCAF1Q9Y4B6 1507 aa27.84■■■□□ 2.05
SARS2-201ENST00000221431 HRCP23327 699 aa27.75■■■□□ 2.03
SARS2-201ENST00000221431 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
SARS2-201ENST00000221431 NACADO15069 1562 aa27.44■■□□□ 1.98
SARS2-201ENST00000221431 RB1CC1Q8TDY2 1594 aa27.31■■□□□ 1.96
SARS2-201ENST00000221431 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
SARS2-201ENST00000221431 LOC105371045A0A1W2PR82 267 aa27.16■■□□□ 1.94
SARS2-201ENST00000221431 PPARGC1BQ86YN6 1023 aaKnown RBP27■■□□□ 1.91
SARS2-201ENST00000221431 TRIM26Q12899 539 aaPredicted RBP26.96■■□□□ 1.91
SARS2-201ENST00000221431 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
SARS2-201ENST00000221431 UNC13AQ9UPW8 1703 aa26.87■■□□□ 1.89
SARS2-201ENST00000221431 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
SARS2-201ENST00000221431 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.862e-6■■■■□ 21.2
SARS2-201ENST00000221431 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
SARS2-201ENST00000221431 ZEB1P37275 1124 aaPredicted RBP26.59■■□□□ 1.85
SARS2-201ENST00000221431 FAM9AQ8IZU1 332 aaPredicted RBP26.4■■□□□ 1.82
SARS2-201ENST00000221431 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
SARS2-201ENST00000221431 MROH2BQ7Z745 1585 aa26.3■■□□□ 1.8
SARS2-201ENST00000221431 WIZO95785 1651 aa26.18■■□□□ 1.78
SARS2-201ENST00000221431 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
SARS2-201ENST00000221431 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
SARS2-201ENST00000221431 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
SARS2-201ENST00000221431 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
SARS2-201ENST00000221431 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
SARS2-201ENST00000221431 PELP1Q8IZL8 1130 aaKnown RBP25.75■■□□□ 1.71
SARS2-201ENST00000221431 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
SARS2-201ENST00000221431 WRNQ14191 1432 aaPredicted RBP eCLIP25.72■■□□□ 1.71
SARS2-201ENST00000221431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.72■■□□□ 1.71
SARS2-201ENST00000221431 SCAF1Q9H7N4 1312 aaKnown RBP25.71■■□□□ 1.71
SARS2-201ENST00000221431 CCDC88BA6NC98 1476 aa25.7■■□□□ 1.7
SARS2-201ENST00000221431 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
SARS2-201ENST00000221431 SMARCA2P51531 1590 aa25.67■■□□□ 1.7
SARS2-201ENST00000221431 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
SARS2-201ENST00000221431 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
SARS2-201ENST00000221431 TNIKQ9UKE5 1360 aa25.58■■□□□ 1.69
SARS2-201ENST00000221431 EEA1Q15075 1411 aa25.58■■□□□ 1.68
SARS2-201ENST00000221431 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
SARS2-201ENST00000221431 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
SARS2-201ENST00000221431 SOGA1O94964 1423 aa25.53■■□□□ 1.68
SARS2-201ENST00000221431 CSRNP3Q8WYN3 585 aa25.47■■□□□ 1.67
SARS2-201ENST00000221431 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
SARS2-201ENST00000221431 ACIN1Q9UKV3 1341 aaKnown RBP25.44■■□□□ 1.66
SARS2-201ENST00000221431 DIEXFQ68CQ4 756 aaKnown RBP25.41■■□□□ 1.66
SARS2-201ENST00000221431 NCAPD3P42695 1498 aa25.37■■□□□ 1.65
SARS2-201ENST00000221431 TTBK1Q5TCY1 1321 aaPredicted RBP25.37■■□□□ 1.65
SARS2-201ENST00000221431 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
SARS2-201ENST00000221431 GOLGA3Q08378 1498 aa25.37■■□□□ 1.65
SARS2-201ENST00000221431 RUSC2Q8N2Y8 1516 aa25.36■■□□□ 1.65
SARS2-201ENST00000221431 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
SARS2-201ENST00000221431 NEUROD1Q13562 356 aa25.31■■□□□ 1.64
SARS2-201ENST00000221431 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
SARS2-201ENST00000221431 CENPBP07199 599 aaPredicted RBP25.3■■□□□ 1.64
SARS2-201ENST00000221431 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
SARS2-201ENST00000221431 ZNF316A6NFI3 1004 aaPredicted RBP25.17■■□□□ 1.62
SARS2-201ENST00000221431 KIF21BO75037 1637 aa25.17■■□□□ 1.62
SARS2-201ENST00000221431 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
SARS2-201ENST00000221431 GTF3C3Q9Y5Q9 886 aa25.11■■□□□ 1.61
SARS2-201ENST00000221431 CLIP1P30622 1438 aa25.07■■□□□ 1.6
SARS2-201ENST00000221431 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.6
SARS2-201ENST00000221431 HNRNPUL2Q1KMD3 747 aaKnown RBP24.97■■□□□ 1.59
SARS2-201ENST00000221431 APLP2Q06481 763 aa24.95■■□□□ 1.58
SARS2-201ENST00000221431 RAPGEF2Q9Y4G8 1499 aa24.9■■□□□ 1.58
SARS2-201ENST00000221431 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
SARS2-201ENST00000221431 NESP48681 1621 aa24.79■■□□□ 1.56
SARS2-201ENST00000221431 MIER1Q8N108 512 aa24.79■■□□□ 1.56
SARS2-201ENST00000221431 CFTRP13569 1480 aa24.76■■□□□ 1.55
SARS2-201ENST00000221431 YTHDC1Q96MU7 727 aaKnown RBP24.76■■□□□ 1.55
SARS2-201ENST00000221431 BIVM-ERCC5R4GMW8 1640 aa24.74■■□□□ 1.55
SARS2-201ENST00000221431 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
SARS2-201ENST00000221431 ERICH3Q5RHP9 1530 aa24.73■■□□□ 1.55
SARS2-201ENST00000221431 CLSPNQ9HAW4 1339 aa24.72■■□□□ 1.55
SARS2-201ENST00000221431 RANGAP1P46060 587 aaPredicted RBP24.68■■□□□ 1.54
SARS2-201ENST00000221431 PRXQ9BXM0 1461 aa24.66■■□□□ 1.54
SARS2-201ENST00000221431 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
SARS2-201ENST00000221431 DHX57Q6P158 1386 aaKnown RBP24.58■■□□□ 1.53
SARS2-201ENST00000221431 MYT1Q01538 1121 aa24.58■■□□□ 1.53
SARS2-201ENST00000221431 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
SARS2-201ENST00000221431 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
SARS2-201ENST00000221431 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
SARS2-201ENST00000221431 RRBP1Q9P2E9 1410 aaKnown RBP24.49■■□□□ 1.51
SARS2-201ENST00000221431 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
SARS2-201ENST00000221431 KANK4Q5T7N3 995 aaPredicted RBP24.49■■□□□ 1.51
SARS2-201ENST00000221431 CUX1P39880 1505 aa24.47■■□□□ 1.51
SARS2-201ENST00000221431 CUX2O14529 1486 aa24.42■■□□□ 1.5
SARS2-201ENST00000221431 KIF21AQ7Z4S6 1674 aa24.41■■□□□ 1.5
SARS2-201ENST00000221431 CCNB3Q8WWL7 1395 aa24.36■■□□□ 1.49
SARS2-201ENST00000221431 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
SARS2-201ENST00000221431 ARHGAP35Q9NRY4 1499 aa24.35■■□□□ 1.49
SARS2-201ENST00000221431 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
SARS2-201ENST00000221431 MAP3K1Q13233 1512 aa24.22■■□□□ 1.47
SARS2-201ENST00000221431 TOPBP1Q92547 1522 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms