RNA–Protein interactions for RNA: ENST00000196061.4

PLOD1-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLOD1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-201ENST00000196061 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
PLOD1-201ENST00000196061 CCER1Q8TC90 406 aaPredicted RBP18.06■□□□□ 0.48
PLOD1-201ENST00000196061 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
PLOD1-201ENST00000196061 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
PLOD1-201ENST00000196061 WDR97A6NE52 1622 aa17.96■□□□□ 0.47
PLOD1-201ENST00000196061 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
PLOD1-201ENST00000196061 ZEB1P37275 1124 aaPredicted RBP17.88■□□□□ 0.45
PLOD1-201ENST00000196061 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
PLOD1-201ENST00000196061 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
PLOD1-201ENST00000196061 FAM50AQ14320 339 aaKnown RBP17.86■□□□□ 0.45
PLOD1-201ENST00000196061 PBRM1Q86U86 1689 aa17.85■□□□□ 0.45
PLOD1-201ENST00000196061 WDR62O43379 1518 aa17.84■□□□□ 0.45
PLOD1-201ENST00000196061 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
PLOD1-201ENST00000196061 PCF11O94913 1555 aaKnown RBP17.82■□□□□ 0.44
PLOD1-201ENST00000196061 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
PLOD1-201ENST00000196061 CUL7Q14999 1698 aa17.81■□□□□ 0.44
PLOD1-201ENST00000196061 GRIN2BQ13224 1484 aa17.79■□□□□ 0.44
PLOD1-201ENST00000196061 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
PLOD1-201ENST00000196061 CTTNBP2Q8WZ74 1663 aa17.78■□□□□ 0.44
PLOD1-201ENST00000196061 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.43
PLOD1-201ENST00000196061 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
PLOD1-201ENST00000196061 PHLDB1Q86UU1 1377 aa17.75■□□□□ 0.43
PLOD1-201ENST00000196061 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
PLOD1-201ENST00000196061 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
PLOD1-201ENST00000196061 LRRC9Q6ZRR7 1453 aa17.66■□□□□ 0.42
PLOD1-201ENST00000196061 CDK13Q14004 1512 aaKnown RBP17.65■□□□□ 0.42
PLOD1-201ENST00000196061 GRIN2AQ12879 1464 aa17.65■□□□□ 0.42
PLOD1-201ENST00000196061 MTUS2Q5JR59 1369 aa17.65■□□□□ 0.42
PLOD1-201ENST00000196061 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
PLOD1-201ENST00000196061 LRRIQ1Q96JM4 1722 aa17.65■□□□□ 0.42
PLOD1-201ENST00000196061 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
PLOD1-201ENST00000196061 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
PLOD1-201ENST00000196061 JPH4Q96JJ6 628 aa17.62■□□□□ 0.41
PLOD1-201ENST00000196061 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
PLOD1-201ENST00000196061 CASKIN1Q8WXD9 1431 aa17.59■□□□□ 0.41
PLOD1-201ENST00000196061 FMN1Q68DA7 1419 aa17.58■□□□□ 0.41
PLOD1-201ENST00000196061 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
PLOD1-201ENST00000196061 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
PLOD1-201ENST00000196061 EFCAB5A4FU69 1503 aa17.56■□□□□ 0.4
PLOD1-201ENST00000196061 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
PLOD1-201ENST00000196061 DISP1Q96F81 1524 aa17.54■□□□□ 0.4
PLOD1-201ENST00000196061 ZNF777Q9ULD5 760 aaPredicted RBP17.54■□□□□ 0.4
PLOD1-201ENST00000196061 SYNJ2O15056 1496 aa17.54■□□□□ 0.4
PLOD1-201ENST00000196061 FYCO1Q9BQS8 1478 aa17.54■□□□□ 0.4
PLOD1-201ENST00000196061 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
PLOD1-201ENST00000196061 RRP7BPQ9NSQ0 103 aa17.53■□□□□ 0.4
PLOD1-201ENST00000196061 RRBP1Q9P2E9 1410 aaKnown RBP17.52■□□□□ 0.39
PLOD1-201ENST00000196061 KIAA0586Q9BVV6 1533 aa17.51■□□□□ 0.39
PLOD1-201ENST00000196061 NEUROD1Q13562 356 aa17.51■□□□□ 0.39
PLOD1-201ENST00000196061 MAGI1Q96QZ7 1491 aaPredicted RBP17.49■□□□□ 0.39
PLOD1-201ENST00000196061 CFAP43Q8NDM7 1665 aa17.49■□□□□ 0.39
PLOD1-201ENST00000196061 RAB3GAP2Q9H2M9 1393 aa17.49■□□□□ 0.39
PLOD1-201ENST00000196061 MYT1Q01538 1121 aa17.48■□□□□ 0.39
PLOD1-201ENST00000196061 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
PLOD1-201ENST00000196061 NCOA2Q15596 1464 aa17.47■□□□□ 0.39
PLOD1-201ENST00000196061 KIAA0556O60303 1618 aa17.46■□□□□ 0.39
PLOD1-201ENST00000196061 EPRSP07814 1512 aaKnown RBP17.45■□□□□ 0.38
PLOD1-201ENST00000196061 CHD1O14646 1710 aa17.45■□□□□ 0.38
PLOD1-201ENST00000196061 PTPRKQ15262 1439 aa17.45■□□□□ 0.38
PLOD1-201ENST00000196061 PRG4Q92954 1404 aaPredicted RBP17.45■□□□□ 0.38
PLOD1-201ENST00000196061 DHX57Q6P158 1386 aaKnown RBP17.45■□□□□ 0.38
PLOD1-201ENST00000196061 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
PLOD1-201ENST00000196061 NUP153P49790 1475 aaKnown RBP17.41■□□□□ 0.38
PLOD1-201ENST00000196061 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
PLOD1-201ENST00000196061 UGGT2Q9NYU1 1516 aa17.41■□□□□ 0.38
PLOD1-201ENST00000196061 ACIN1Q9UKV3 1341 aaKnown RBP17.41■□□□□ 0.38
PLOD1-201ENST00000196061 FGD6Q6ZV73 1430 aa17.41■□□□□ 0.38
PLOD1-201ENST00000196061 FOXD1Q16676 465 aa17.39■□□□□ 0.37
PLOD1-201ENST00000196061 NUP160Q12769 1436 aa17.38■□□□□ 0.37
PLOD1-201ENST00000196061 HIRIP3Q9BW71 556 aaPredicted RBP17.37■□□□□ 0.37
PLOD1-201ENST00000196061 HECW1Q76N89 1606 aa17.34■□□□□ 0.37
PLOD1-201ENST00000196061 MAP3K1Q13233 1512 aa17.34■□□□□ 0.37
PLOD1-201ENST00000196061 TRIM52Q96A61 297 aa17.34■□□□□ 0.37
PLOD1-201ENST00000196061 MYOM3Q5VTT5 1437 aa17.33■□□□□ 0.36
PLOD1-201ENST00000196061 CARMIL2Q6F5E8 1435 aa17.32■□□□□ 0.36
PLOD1-201ENST00000196061 SETD5Q9C0A6 1442 aa17.32■□□□□ 0.36
PLOD1-201ENST00000196061 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
PLOD1-201ENST00000196061 PTPRGP23470 1445 aa17.31■□□□□ 0.36
PLOD1-201ENST00000196061 SUPT6HQ7KZ85 1726 aaKnown RBP17.3■□□□□ 0.36
PLOD1-201ENST00000196061 KIF14Q15058 1648 aa17.29■□□□□ 0.36
PLOD1-201ENST00000196061 CFDP1Q9UEE9 299 aaPredicted RBP17.28■□□□□ 0.36
PLOD1-201ENST00000196061 EHBP1L1Q8N3D4 1523 aa17.27■□□□□ 0.36
PLOD1-201ENST00000196061 PLEKHD1A6NEE1 506 aa17.27■□□□□ 0.36
PLOD1-201ENST00000196061 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
PLOD1-201ENST00000196061 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
PLOD1-201ENST00000196061 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
PLOD1-201ENST00000196061 HNRNPMP52272 730 aaKnown RBP eCLIP17.24■□□□□ 0.35
PLOD1-201ENST00000196061 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
PLOD1-201ENST00000196061 ATP10BO94823 1461 aa17.23■□□□□ 0.35
PLOD1-201ENST00000196061 KDM6BO15054 1643 aa17.23■□□□□ 0.35
PLOD1-201ENST00000196061 ARHGEF11O15085 1522 aa17.22■□□□□ 0.35
PLOD1-201ENST00000196061 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
PLOD1-201ENST00000196061 MAPKBP1O60336 1514 aa17.21■□□□□ 0.34
PLOD1-201ENST00000196061 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
PLOD1-201ENST00000196061 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
PLOD1-201ENST00000196061 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
PLOD1-201ENST00000196061 NAIPQ13075 1403 aa17.17■□□□□ 0.34
PLOD1-201ENST00000196061 TROQ12816 1431 aaPredicted RBP17.16■□□□□ 0.34
PLOD1-201ENST00000196061 ABCA8O94911 1581 aa17.12■□□□□ 0.33
PLOD1-201ENST00000196061 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms