RNA–Protein interactions for RNA: ENST00000188312.6

ACTR6-201, Transcript of ARP6 actin related protein 6 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR6, Length 2,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-201ENST00000188312 RRBP1Q9P2E9 1410 aaKnown RBP12.66□□□□□ -0.38
ACTR6-201ENST00000188312 ARHGAP35Q9NRY4 1499 aa12.64□□□□□ -0.39
ACTR6-201ENST00000188312 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
ACTR6-201ENST00000188312 NEFLP07196 543 aa12.63□□□□□ -0.39
ACTR6-201ENST00000188312 DDX10Q13206 875 aaKnown RBP12.63□□□□□ -0.39
ACTR6-201ENST00000188312 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
ACTR6-201ENST00000188312 NESP48681 1621 aa12.63□□□□□ -0.39
ACTR6-201ENST00000188312 ITGAEP38570 1179 aa12.61□□□□□ -0.39
ACTR6-201ENST00000188312 CCNB3Q8WWL7 1395 aa12.61□□□□□ -0.39
ACTR6-201ENST00000188312 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
ACTR6-201ENST00000188312 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
ACTR6-201ENST00000188312 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
ACTR6-201ENST00000188312 LAMC3Q9Y6N6 1575 aa12.58□□□□□ -0.4
ACTR6-201ENST00000188312 PPP1R15AO75807 674 aaPredicted RBP12.58□□□□□ -0.4
ACTR6-201ENST00000188312 RAD54L2Q9Y4B4 1467 aa12.58□□□□□ -0.4
ACTR6-201ENST00000188312 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
ACTR6-201ENST00000188312 MSH5O43196 834 aa12.56□□□□□ -0.4
ACTR6-201ENST00000188312 TRIM52Q96A61 297 aa12.56□□□□□ -0.4
ACTR6-201ENST00000188312 MAPKBP1O60336 1514 aa12.55□□□□□ -0.4
ACTR6-201ENST00000188312 CCER2I3L3R5 266 aa12.54□□□□□ -0.4
ACTR6-201ENST00000188312 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.4
ACTR6-201ENST00000188312 SIN3AQ96ST3 1273 aa12.52□□□□□ -0.4
ACTR6-201ENST00000188312 WDR97A6NE52 1622 aa12.51□□□□□ -0.41
ACTR6-201ENST00000188312 CUL7Q14999 1698 aa12.51□□□□□ -0.41
ACTR6-201ENST00000188312 ANP32CO43423 234 aa12.51□□□□□ -0.41
ACTR6-201ENST00000188312 MAP3K1Q13233 1512 aa12.49□□□□□ -0.41
ACTR6-201ENST00000188312 TIAM1Q13009 1591 aa12.49□□□□□ -0.41
ACTR6-201ENST00000188312 SETD5Q9C0A6 1442 aa12.49□□□□□ -0.41
ACTR6-201ENST00000188312 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
ACTR6-201ENST00000188312 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
ACTR6-201ENST00000188312 FANCIQ9NVI1 1328 aa12.49□□□□□ -0.41
ACTR6-201ENST00000188312 TIMELESSQ9UNS1 1208 aa12.48□□□□□ -0.41
ACTR6-201ENST00000188312 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
ACTR6-201ENST00000188312 DNAJC5BQ9UF47 199 aa12.46□□□□□ -0.41
ACTR6-201ENST00000188312 EFCAB5A4FU69 1503 aa12.45□□□□□ -0.42
ACTR6-201ENST00000188312 ABCA5Q8WWZ7 1642 aa12.45□□□□□ -0.42
ACTR6-201ENST00000188312 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
ACTR6-201ENST00000188312 PCF11O94913 1555 aaKnown RBP12.44□□□□□ -0.42
ACTR6-201ENST00000188312 KIF21AQ7Z4S6 1674 aa12.44□□□□□ -0.42
ACTR6-201ENST00000188312 CDK11AQ9UQ88 783 aaPredicted RBP12.44□□□□□ -0.42
ACTR6-201ENST00000188312 LRRC9Q6ZRR7 1453 aa12.43□□□□□ -0.42
ACTR6-201ENST00000188312 CFAP43Q8NDM7 1665 aa12.43□□□□□ -0.42
ACTR6-201ENST00000188312 FHOD3Q2V2M9 1422 aa12.43□□□□□ -0.42
ACTR6-201ENST00000188312 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
ACTR6-201ENST00000188312 P3H3Q8IVL6 736 aa12.42□□□□□ -0.42
ACTR6-201ENST00000188312 TDRD9Q8NDG6 1382 aaKnown RBP12.42□□□□□ -0.42
ACTR6-201ENST00000188312 GAPVD1Q14C86 1478 aa12.41□□□□□ -0.42
ACTR6-201ENST00000188312 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.42
ACTR6-201ENST00000188312 FAM50AQ14320 339 aaKnown RBP12.4□□□□□ -0.42
ACTR6-201ENST00000188312 IRX6P78412 446 aaPredicted RBP12.39□□□□□ -0.43
ACTR6-201ENST00000188312 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.436e-9■■■■■ 45.1
ACTR6-201ENST00000188312 PHLDB1Q86UU1 1377 aa12.38□□□□□ -0.43
ACTR6-201ENST00000188312 CASKIN1Q8WXD9 1431 aa12.38□□□□□ -0.43
ACTR6-201ENST00000188312 HNRNPUQ00839 825 aaKnown RBP eCLIP12.37□□□□□ -0.43
ACTR6-201ENST00000188312 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
ACTR6-201ENST00000188312 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
ACTR6-201ENST00000188312 FMN1Q68DA7 1419 aa12.35□□□□□ -0.43
ACTR6-201ENST00000188312 MYT1LQ9UL68 1186 aa12.35□□□□□ -0.43
ACTR6-201ENST00000188312 SAMD9Q5K651 1589 aa12.34□□□□□ -0.43
ACTR6-201ENST00000188312 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
ACTR6-201ENST00000188312 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
ACTR6-201ENST00000188312 PPP4R2Q9NY27 417 aa12.32□□□□□ -0.44
ACTR6-201ENST00000188312 MRC2Q9UBG0 1479 aa12.32□□□□□ -0.44
ACTR6-201ENST00000188312 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
ACTR6-201ENST00000188312 DEKP35659 375 aaKnown RBP12.31□□□□□ -0.44
ACTR6-201ENST00000188312 PBRM1Q86U86 1689 aa12.31□□□□□ -0.44
ACTR6-201ENST00000188312 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
ACTR6-201ENST00000188312 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
ACTR6-201ENST00000188312 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
ACTR6-201ENST00000188312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.26□□□□□ -0.45
ACTR6-201ENST00000188312 MTUS2Q5JR59 1369 aa12.25□□□□□ -0.45
ACTR6-201ENST00000188312 LRRIQ1Q96JM4 1722 aa12.25□□□□□ -0.45
ACTR6-201ENST00000188312 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
ACTR6-201ENST00000188312 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
ACTR6-201ENST00000188312 IQGAP2Q13576 1575 aa12.23□□□□□ -0.45
ACTR6-201ENST00000188312 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
ACTR6-201ENST00000188312 WDR62O43379 1518 aa12.22□□□□□ -0.45
ACTR6-201ENST00000188312 WASHC2AQ641Q2 1341 aa12.22□□□□□ -0.45
ACTR6-201ENST00000188312 CCDC184Q52MB2 194 aa12.21□□□□□ -0.45
ACTR6-201ENST00000188312 NOP58Q9Y2X3 529 aaKnown RBP12.21□□□□□ -0.45
ACTR6-201ENST00000188312 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.46
ACTR6-201ENST00000188312 NCOA2Q15596 1464 aa12.2□□□□□ -0.46
ACTR6-201ENST00000188312 HSPA5P11021 654 aaKnown RBP12.19□□□□□ -0.46
ACTR6-201ENST00000188312 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
ACTR6-201ENST00000188312 SUPT6HQ7KZ85 1726 aaKnown RBP12.19□□□□□ -0.46
ACTR6-201ENST00000188312 UACAQ9BZF9 1416 aa12.19□□□□□ -0.46
ACTR6-201ENST00000188312 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
ACTR6-201ENST00000188312 NBR1Q14596 966 aa12.19□□□□□ -0.46
ACTR6-201ENST00000188312 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
ACTR6-201ENST00000188312 HECW1Q76N89 1606 aa12.18□□□□□ -0.46
ACTR6-201ENST00000188312 MYOM3Q5VTT5 1437 aa12.18□□□□□ -0.46
ACTR6-201ENST00000188312 PRKCSHP14314 528 aaPredicted RBP12.17□□□□□ -0.46
ACTR6-201ENST00000188312 FAM9BQ8IZU0 186 aa12.17□□□□□ -0.46
ACTR6-201ENST00000188312 HFM1A2PYH4 1435 aa12.16□□□□□ -0.46
ACTR6-201ENST00000188312 UGGT2Q9NYU1 1516 aa12.16□□□□□ -0.46
ACTR6-201ENST00000188312 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
ACTR6-201ENST00000188312 ZBED9Q6R2W3 1325 aa12.15□□□□□ -0.46
ACTR6-201ENST00000188312 MAGI3Q5TCQ9 1506 aa12.15□□□□□ -0.46
ACTR6-201ENST00000188312 PTPRKQ15262 1439 aa12.15□□□□□ -0.46
ACTR6-201ENST00000188312 ARHGEF11O15085 1522 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms