RNA–Protein interactions for RNA: ENST00000188312.6

ACTR6-201, Transcript of ARP6 actin related protein 6 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR6, Length 2,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-201ENST00000188312 NISCHQ9Y2I1 1504 aa17.87■□□□□ 0.45
ACTR6-201ENST00000188312 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
ACTR6-201ENST00000188312 ZCCHC6Q5VYS8 1495 aaKnown RBP15.1■□□□□ 0.01
ACTR6-201ENST00000188312 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
ACTR6-201ENST00000188312 HRCP23327 699 aa15□□□□□ -0.01
ACTR6-201ENST00000188312 SUPT5HO00267 1087 aaKnown RBP14.92□□□□□ -0.02
ACTR6-201ENST00000188312 DCAF8L2P0C7V8 631 aa14.72□□□□□ -0.05
ACTR6-201ENST00000188312 PCGF6Q9BYE7 350 aa14.72□□□□□ -0.05
ACTR6-201ENST00000188312 DCAF1Q9Y4B6 1507 aa14.72□□□□□ -0.05
ACTR6-201ENST00000188312 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
ACTR6-201ENST00000188312 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
ACTR6-201ENST00000188312 PPARGC1BQ86YN6 1023 aaKnown RBP14.66□□□□□ -0.06
ACTR6-201ENST00000188312 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
ACTR6-201ENST00000188312 LOC105371045A0A1W2PR82 267 aa14.33□□□□□ -0.12
ACTR6-201ENST00000188312 TRIM26Q12899 539 aaPredicted RBP14.3□□□□□ -0.12
ACTR6-201ENST00000188312 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
ACTR6-201ENST00000188312 ABCC9O60706 1549 aa14.22□□□□□ -0.13
ACTR6-201ENST00000188312 NACADO15069 1562 aa14.19□□□□□ -0.14
ACTR6-201ENST00000188312 ZEB1P37275 1124 aaPredicted RBP14.17□□□□□ -0.14
ACTR6-201ENST00000188312 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
ACTR6-201ENST00000188312 RSF1Q96T23 1441 aaPredicted RBP14.05□□□□□ -0.16
ACTR6-201ENST00000188312 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
ACTR6-201ENST00000188312 CECR2Q9BXF3 1484 aa13.9□□□□□ -0.18
ACTR6-201ENST00000188312 MROH2BQ7Z745 1585 aa13.85□□□□□ -0.19
ACTR6-201ENST00000188312 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
ACTR6-201ENST00000188312 ACIN1Q9UKV3 1341 aaKnown RBP13.82□□□□□ -0.2
ACTR6-201ENST00000188312 FAM9AQ8IZU1 332 aaPredicted RBP13.79□□□□□ -0.2
ACTR6-201ENST00000188312 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
ACTR6-201ENST00000188312 WIZO95785 1651 aa13.77□□□□□ -0.2
ACTR6-201ENST00000188312 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
ACTR6-201ENST00000188312 MYT1Q01538 1121 aa13.75□□□□□ -0.21
ACTR6-201ENST00000188312 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
ACTR6-201ENST00000188312 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.21
ACTR6-201ENST00000188312 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
ACTR6-201ENST00000188312 GTF3C3Q9Y5Q9 886 aa13.69□□□□□ -0.22
ACTR6-201ENST00000188312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
ACTR6-201ENST00000188312 CENPBP07199 599 aaPredicted RBP13.66□□□□□ -0.22
ACTR6-201ENST00000188312 CCER1Q8TC90 406 aaPredicted RBP13.66□□□□□ -0.22
ACTR6-201ENST00000188312 SMARCA4P51532 1647 aa13.65□□□□□ -0.23
ACTR6-201ENST00000188312 DIEXFQ68CQ4 756 aaKnown RBP13.64□□□□□ -0.23
ACTR6-201ENST00000188312 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
ACTR6-201ENST00000188312 BICRAQ9NZM4 1560 aa13.57□□□□□ -0.24
ACTR6-201ENST00000188312 EIF4G1Q04637 1599 aaKnown RBP13.56□□□□□ -0.24
ACTR6-201ENST00000188312 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
ACTR6-201ENST00000188312 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
ACTR6-201ENST00000188312 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
ACTR6-201ENST00000188312 PEG3Q9GZU2 1588 aa13.42□□□□□ -0.26
ACTR6-201ENST00000188312 ZNF316A6NFI3 1004 aaPredicted RBP13.4□□□□□ -0.26
ACTR6-201ENST00000188312 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
ACTR6-201ENST00000188312 YTHDC1Q96MU7 727 aaKnown RBP13.37□□□□□ -0.27
ACTR6-201ENST00000188312 TTBK1Q5TCY1 1321 aaPredicted RBP13.36□□□□□ -0.27
ACTR6-201ENST00000188312 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
ACTR6-201ENST00000188312 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
ACTR6-201ENST00000188312 MIER1Q8N108 512 aa13.3□□□□□ -0.28
ACTR6-201ENST00000188312 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
ACTR6-201ENST00000188312 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
ACTR6-201ENST00000188312 SOGA1O94964 1423 aa13.22□□□□□ -0.29
ACTR6-201ENST00000188312 EEA1Q15075 1411 aa13.21□□□□□ -0.29
ACTR6-201ENST00000188312 TNIKQ9UKE5 1360 aa13.2□□□□□ -0.3
ACTR6-201ENST00000188312 RUSC2Q8N2Y8 1516 aa13.15□□□□□ -0.3
ACTR6-201ENST00000188312 SYNJ1O43426 1573 aa13.15□□□□□ -0.3
ACTR6-201ENST00000188312 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
ACTR6-201ENST00000188312 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
ACTR6-201ENST00000188312 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
ACTR6-201ENST00000188312 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
ACTR6-201ENST00000188312 NCAPD3P42695 1498 aa13.11□□□□□ -0.31
ACTR6-201ENST00000188312 GOLGA3Q08378 1498 aa13.08□□□□□ -0.32
ACTR6-201ENST00000188312 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
ACTR6-201ENST00000188312 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
ACTR6-201ENST00000188312 CEP164Q9UPV0 1460 aa13.03□□□□□ -0.32
ACTR6-201ENST00000188312 KIF21BO75037 1637 aa13.03□□□□□ -0.32
ACTR6-201ENST00000188312 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
ACTR6-201ENST00000188312 BIVM-ERCC5R4GMW8 1640 aa13□□□□□ -0.33
ACTR6-201ENST00000188312 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
ACTR6-201ENST00000188312 ANP32EQ9BTT0 268 aa12.97□□□□□ -0.33
ACTR6-201ENST00000188312 CFTRP13569 1480 aa12.95□□□□□ -0.34
ACTR6-201ENST00000188312 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
ACTR6-201ENST00000188312 CUX1P39880 1505 aa12.92□□□□□ -0.34
ACTR6-201ENST00000188312 APLP2Q06481 763 aa12.92□□□□□ -0.34
ACTR6-201ENST00000188312 CLIP1P30622 1438 aa12.92□□□□□ -0.34
ACTR6-201ENST00000188312 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.34
ACTR6-201ENST00000188312 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
ACTR6-201ENST00000188312 DHX57Q6P158 1386 aaKnown RBP12.87□□□□□ -0.35
ACTR6-201ENST00000188312 ERICH3Q5RHP9 1530 aa12.86□□□□□ -0.35
ACTR6-201ENST00000188312 BCL11AQ9H165 835 aa12.85□□□□□ -0.35
ACTR6-201ENST00000188312 PRXQ9BXM0 1461 aa12.85□□□□□ -0.35
ACTR6-201ENST00000188312 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
ACTR6-201ENST00000188312 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
ACTR6-201ENST00000188312 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
ACTR6-201ENST00000188312 RANGAP1P46060 587 aaPredicted RBP12.8□□□□□ -0.36
ACTR6-201ENST00000188312 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
ACTR6-201ENST00000188312 BCANQ96GW7 911 aa12.77□□□□□ -0.37
ACTR6-201ENST00000188312 FKBP8Q14318 412 aa12.73□□□□□ -0.37
ACTR6-201ENST00000188312 CUX2O14529 1486 aa12.73□□□□□ -0.37
ACTR6-201ENST00000188312 ARAP1Q96P48 1450 aa12.73□□□□□ -0.37
ACTR6-201ENST00000188312 KANK4Q5T7N3 995 aaPredicted RBP12.71□□□□□ -0.37
ACTR6-201ENST00000188312 FGD5Q6ZNL6 1462 aa12.71□□□□□ -0.37
ACTR6-201ENST00000188312 FANCD2Q9BXW9 1451 aa12.7□□□□□ -0.38
ACTR6-201ENST00000188312 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
ACTR6-201ENST00000188312 IGF1RP08069 1367 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms