RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 JPH4Q96JJ6 628 aa48.13■■■■■ 5.3
PDCD2-201ENST00000167218 PRG4Q92954 1404 aaPredicted RBP48.07■■■■■ 5.28
PDCD2-201ENST00000167218 KIAA0586Q9BVV6 1533 aa48.02■■■■■ 5.28
PDCD2-201ENST00000167218 TRHP20396 242 aaPredicted RBP47.85■■■■■ 5.25
PDCD2-201ENST00000167218 RAPGEF2Q9Y4G8 1499 aa47.78■■■■■ 5.24
PDCD2-201ENST00000167218 IQGAP2Q13576 1575 aa47.65■■■■■ 5.22
PDCD2-201ENST00000167218 PRXQ9BXM0 1461 aa47.53■■■■■ 5.2
PDCD2-201ENST00000167218 CARMIL2Q6F5E8 1435 aa47.47■■■■■ 5.19
PDCD2-201ENST00000167218 ADCY10Q96PN6 1610 aa47.44■■■■■ 5.18
PDCD2-201ENST00000167218 DISP1Q96F81 1524 aa47.42■■■■■ 5.18
PDCD2-201ENST00000167218 UGGT2Q9NYU1 1516 aa47.41■■■■■ 5.18
PDCD2-201ENST00000167218 PTPRGP23470 1445 aa47.41■■■■■ 5.18
PDCD2-201ENST00000167218 TNIKQ9UKE5 1360 aa47.4■■■■■ 5.18
PDCD2-201ENST00000167218 CTTNBP2Q8WZ74 1663 aa47.35■■■■■ 5.17
PDCD2-201ENST00000167218 CSRNP3Q8WYN3 585 aa47.32■■■■■ 5.17
PDCD2-201ENST00000167218 NPM1P06748 294 aaKnown RBP eCLIP47.27■■■■■ 5.16
PDCD2-201ENST00000167218 TTBK1Q5TCY1 1321 aaPredicted RBP47.26■■■■■ 5.16
PDCD2-201ENST00000167218 EEA1Q15075 1411 aa47.23■■■■■ 5.15
PDCD2-201ENST00000167218 MAPKBP1O60336 1514 aa47.23■■■■■ 5.15
PDCD2-201ENST00000167218 KIAA0556O60303 1618 aa47.23■■■■■ 5.15
PDCD2-201ENST00000167218 KIF13AQ9H1H9 1805 aa47.21■■■■■ 5.15
PDCD2-201ENST00000167218 CHIC1Q5VXU3 224 aa47.15■■■■■ 5.14
PDCD2-201ENST00000167218 UHRF1BP1LA0JNW5 1464 aa47.1■■■■■ 5.13
PDCD2-201ENST00000167218 ABCC10Q5T3U5 1492 aa47.09■■■■■ 5.13
PDCD2-201ENST00000167218 UACAQ9BZF9 1416 aa47.09■■■■■ 5.13
PDCD2-201ENST00000167218 ABCC2Q92887 1545 aa47.07■■■■■ 5.13
PDCD2-201ENST00000167218 GOLGA3Q08378 1498 aa47.03■■■■■ 5.12
PDCD2-201ENST00000167218 FAM9AQ8IZU1 332 aaPredicted RBP47■■■■■ 5.11
PDCD2-201ENST00000167218 DIP2BQ9P265 1576 aa46.99■■■■■ 5.11
PDCD2-201ENST00000167218 FAM69CQ0P6D2 419 aa46.98■■■■■ 5.11
PDCD2-201ENST00000167218 KDM5BQ9UGL1 1544 aa46.89■■■■■ 5.1
PDCD2-201ENST00000167218 PLB1Q6P1J6 1458 aa46.83■■■■■ 5.09
PDCD2-201ENST00000167218 ASXL2Q76L83 1435 aa46.83■■■■■ 5.09
PDCD2-201ENST00000167218 KIF21BO75037 1637 aa46.82■■■■■ 5.09
PDCD2-201ENST00000167218 ABCA8O94911 1581 aa46.77■■■■■ 5.08
PDCD2-201ENST00000167218 ZCCHC11Q5TAX3 1644 aaKnown RBP46.76■■■■■ 5.08
PDCD2-201ENST00000167218 SAMD9Q5K651 1589 aa46.75■■■■■ 5.07
PDCD2-201ENST00000167218 P3H3Q8IVL6 736 aa46.71■■■■■ 5.07
PDCD2-201ENST00000167218 GLI2P10070 1586 aa46.64■■■■■ 5.06
PDCD2-201ENST00000167218 TSPOAP1O95153 1857 aa46.63■■■■■ 5.05
PDCD2-201ENST00000167218 EPRSP07814 1512 aaKnown RBP46.57■■■■■ 5.05
PDCD2-201ENST00000167218 RANGAP1P46060 587 aaPredicted RBP46.51■■■■■ 5.04
PDCD2-201ENST00000167218 WDR7Q9Y4E6 1490 aa46.5■■■■■ 5.03
PDCD2-201ENST00000167218 PPRC1Q5VV67 1664 aaKnown RBP46.46■■■■■ 5.03
PDCD2-201ENST00000167218 FHOD3Q2V2M9 1422 aa46.43■■■■■ 5.02
PDCD2-201ENST00000167218 EHMT2Q96KQ7 1210 aa46.41■■■■■ 5.02
PDCD2-201ENST00000167218 MAP3K4Q9Y6R4 1608 aa46.41■■■■■ 5.02
PDCD2-201ENST00000167218 ATP10BO94823 1461 aa46.39■■■■■ 5.02
PDCD2-201ENST00000167218 UBTFP17480 764 aaKnown RBP46.39■■■■■ 5.02
PDCD2-201ENST00000167218 EFCAB5A4FU69 1503 aa46.38■■■■■ 5.02
PDCD2-201ENST00000167218 RAPGEF6Q8TEU7 1601 aa46.38■■■■■ 5.01
PDCD2-201ENST00000167218 KDM6BO15054 1643 aa46.34■■■■■ 5.01
PDCD2-201ENST00000167218 ARID3CA6NKF2 412 aa46.32■■■■■ 5.01
PDCD2-201ENST00000167218 KCNH8Q96L42 1107 aa46.25■■■■■ 4.99
PDCD2-201ENST00000167218 NUP153P49790 1475 aaKnown RBP46.25■■■■■ 4.99
PDCD2-201ENST00000167218 CFAP43Q8NDM7 1665 aa46.17■■■■■ 4.98
PDCD2-201ENST00000167218 TEX14Q8IWB6 1497 aa46.16■■■■■ 4.98
PDCD2-201ENST00000167218 ARHGAP35Q9NRY4 1499 aa46.13■■■■■ 4.98
PDCD2-201ENST00000167218 CD109Q6YHK3 1445 aa46.12■■■■■ 4.97
PDCD2-201ENST00000167218 COL17A1Q9UMD9 1497 aaPredicted RBP46.1■■■■■ 4.97
PDCD2-201ENST00000167218 MAGI3Q5TCQ9 1506 aa46.09■■■■■ 4.97
PDCD2-201ENST00000167218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP46.04■■■■■ 4.96
PDCD2-201ENST00000167218 HNRNPUL2Q1KMD3 747 aaKnown RBP46.04■■■■■ 4.96
PDCD2-201ENST00000167218 ABCA9Q8IUA7 1624 aa45.98■■■■■ 4.95
PDCD2-201ENST00000167218 FMN1Q68DA7 1419 aa45.95■■■■■ 4.95
PDCD2-201ENST00000167218 PLEKHD1A6NEE1 506 aa45.88■■■■■ 4.94
PDCD2-201ENST00000167218 CDK13Q14004 1512 aaKnown RBP45.85■■■■■ 4.93
PDCD2-201ENST00000167218 AEBP2Q6ZN18 517 aaPredicted RBP45.8■■■■■ 4.92
PDCD2-201ENST00000167218 HECW1Q76N89 1606 aa45.8■■■■■ 4.92
PDCD2-201ENST00000167218 ATP1B4Q9UN42 357 aaPredicted RBP45.72■■■■■ 4.91
PDCD2-201ENST00000167218 ARAP3Q8WWN8 1544 aa45.72■■■■■ 4.91
PDCD2-201ENST00000167218 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP45.67■■■■■ 4.91e-6■■□□□ 13.9
PDCD2-201ENST00000167218 PHLDB1Q86UU1 1377 aa45.67■■■■■ 4.9
PDCD2-201ENST00000167218 LRRIQ1Q96JM4 1722 aa45.64■■■■■ 4.9
PDCD2-201ENST00000167218 NEO1Q92859 1461 aa45.64■■■■■ 4.9
PDCD2-201ENST00000167218 CLIP1P30622 1438 aa45.63■■■■■ 4.9
PDCD2-201ENST00000167218 KDM4FA0A1W2PPD8 638 aa45.63■■■■■ 4.9
PDCD2-201ENST00000167218 TTC37Q6PGP7 1564 aa45.6■■■■■ 4.89
PDCD2-201ENST00000167218 CASKIN1Q8WXD9 1431 aa45.58■■■■■ 4.89
PDCD2-201ENST00000167218 PCF11O94913 1555 aaKnown RBP45.56■■■■■ 4.88
PDCD2-201ENST00000167218 CDK11AQ9UQ88 783 aaPredicted RBP45.52■■■■■ 4.88
PDCD2-201ENST00000167218 TROQ12816 1431 aaPredicted RBP45.45■■■■■ 4.87
PDCD2-201ENST00000167218 FANCAO15360 1455 aa45.45■■■■■ 4.87
PDCD2-201ENST00000167218 RAPGEF3O95398 923 aa45.44■■■■■ 4.86
PDCD2-201ENST00000167218 AKNAQ7Z591 1439 aa45.42■■■■■ 4.86
PDCD2-201ENST00000167218 FYCO1Q9BQS8 1478 aa45.42■■■■■ 4.86
PDCD2-201ENST00000167218 KIF14Q15058 1648 aa45.41■■■■■ 4.86
PDCD2-201ENST00000167218 CCDC18Q5T9S5 1454 aa45.41■■■■■ 4.86
PDCD2-201ENST00000167218 PLCH2O75038 1416 aa45.4■■■■■ 4.86
PDCD2-201ENST00000167218 FRMPD1Q5SYB0 1578 aa45.4■■■■■ 4.86
PDCD2-201ENST00000167218 ADGRL1O94910 1474 aa45.39■■■■■ 4.86
PDCD2-201ENST00000167218 CFAP74Q9C0B2 1584 aa45.39■■■■■ 4.86
PDCD2-201ENST00000167218 DENND4BO75064 1496 aaPredicted RBP45.3■■■■■ 4.84
PDCD2-201ENST00000167218 MYO5CQ9NQX4 1742 aa45.3■■■■■ 4.84
PDCD2-201ENST00000167218 CEP162Q5TB80 1403 aa45.3■■■■■ 4.84
PDCD2-201ENST00000167218 RICTORQ6R327 1708 aa45.29■■■■■ 4.84
PDCD2-201ENST00000167218 LOC105371045A0A1W2PR82 267 aa45.23■■■■■ 4.83
PDCD2-201ENST00000167218 EFCAB2Q5VUJ9 269 aa45.18■■■■■ 4.82
PDCD2-201ENST00000167218 SCAPERQ9BY12 1400 aa45.15■■■■■ 4.82
PDCD2-201ENST00000167218 ZMYM4Q5VZL5 1548 aa45.11■■■■■ 4.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms