RNA–Protein interactions for RNA: ENSMUST00000228434.1

Col20a1-205, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS P2 BASIC

Gene Col20a1, Length 5,012 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-205ENSMUST00000228434 Wdr43Q6ZQL4 677 aaKnown RBP17.65■□□□□ 0.42
Col20a1-205ENSMUST00000228434 Ccdc88bQ4QRL3 1481 aa17.64■□□□□ 0.42
Col20a1-205ENSMUST00000228434 Atp1b4Q99ME6 356 aa17.64■□□□□ 0.41
Col20a1-205ENSMUST00000228434 Ccdc18Q640L5 1455 aa17.64■□□□□ 0.41
Col20a1-205ENSMUST00000228434 DiexfQ8BTT6 772 aaKnown RBP17.62■□□□□ 0.41
Col20a1-205ENSMUST00000228434 1700123L14RikQ3V2K7 440 aa17.61■□□□□ 0.41
Col20a1-205ENSMUST00000228434 Polr3glQ8R0C0 218 aa17.61■□□□□ 0.41
Col20a1-205ENSMUST00000228434 Ercc6F8VPZ5 1481 aa17.55■□□□□ 0.4
Col20a1-205ENSMUST00000228434 Rad21Q61550 635 aaKnown RBP17.54■□□□□ 0.4
Col20a1-205ENSMUST00000228434 Cep162Q6ZQ06 1403 aa17.53■□□□□ 0.4
Col20a1-205ENSMUST00000228434 Rgl3Q3UYI5 709 aa17.53■□□□□ 0.4
Col20a1-205ENSMUST00000228434 Crybg2B7ZCC2 1516 aa17.52■□□□□ 0.4
Col20a1-205ENSMUST00000228434 Fmn1Q05860 1466 aa17.52■□□□□ 0.39
Col20a1-205ENSMUST00000228434 Mia2Q91ZV0 1396 aa17.49■□□□□ 0.39
Col20a1-205ENSMUST00000228434 Sycp2Q9CUU3 1500 aa17.44■□□□□ 0.38
Col20a1-205ENSMUST00000228434 Gm13695A2AK44 830 aa17.43■□□□□ 0.38
Col20a1-205ENSMUST00000228434 ArxO35085 564 aa17.42■□□□□ 0.38
Col20a1-205ENSMUST00000228434 Ofd1Q80Z25 1017 aa17.41■□□□□ 0.38
Col20a1-205ENSMUST00000228434 Cwc22Q8C5N3 908 aaKnown RBP17.41■□□□□ 0.38
Col20a1-205ENSMUST00000228434 CftrP26361 1476 aa17.37■□□□□ 0.37
Col20a1-205ENSMUST00000228434 Fam71e1A1L3C1 212 aa17.37■□□□□ 0.37
Col20a1-205ENSMUST00000228434 Card11Q8CIS0 1159 aa17.36■□□□□ 0.37
Col20a1-205ENSMUST00000228434 Pds5bQ4VA53 1446 aaKnown RBP17.35■□□□□ 0.37
Col20a1-205ENSMUST00000228434 Hspa5P20029 655 aaKnown RBP17.35■□□□□ 0.37
Col20a1-205ENSMUST00000228434 Grwd1Q810D6 446 aaKnown RBP17.35■□□□□ 0.37
Col20a1-205ENSMUST00000228434 Smarca2Q6DIC0 1577 aa17.35■□□□□ 0.37
Col20a1-205ENSMUST00000228434 Mtus2Q3UHD3 1353 aa17.35■□□□□ 0.37
Col20a1-205ENSMUST00000228434 Arhgap27A2AB59 869 aa17.33■□□□□ 0.37
Col20a1-205ENSMUST00000228434 P3h3Q8CG70 732 aa17.33■□□□□ 0.36
Col20a1-205ENSMUST00000228434 Cecr2E9Q2Z1 1453 aa17.28■□□□□ 0.36
Col20a1-205ENSMUST00000228434 Ccdc9Q8VC31 543 aaKnown RBP17.28■□□□□ 0.36
Col20a1-205ENSMUST00000228434 Rangap1P46061 589 aaKnown RBP17.27■□□□□ 0.35
Col20a1-205ENSMUST00000228434 Mroh3A0A1D5RM54 893 aa17.25■□□□□ 0.35
Col20a1-205ENSMUST00000228434 Hsp90aa1P07901 733 aaKnown RBP17.24■□□□□ 0.35
Col20a1-205ENSMUST00000228434 Fyco1Q8VDC1 1437 aa17.23■□□□□ 0.35
Col20a1-205ENSMUST00000228434 Aebp1Q640N1 1128 aa17.23■□□□□ 0.35
Col20a1-205ENSMUST00000228434 Kdm2aP59997 1161 aa17.23■□□□□ 0.35
Col20a1-205ENSMUST00000228434 Kif27Q7M6Z4 1394 aa17.23■□□□□ 0.35
Col20a1-205ENSMUST00000228434 CanxP35564 591 aaKnown RBP17.22■□□□□ 0.35
Col20a1-205ENSMUST00000228434 Rrp7aQ9D1C9 280 aaKnown RBP17.21■□□□□ 0.35
Col20a1-205ENSMUST00000228434 SafbD3YXK2 937 aaKnown RBP17.2■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Baz1bQ9Z277 1479 aa17.2■□□□□ 0.34
Col20a1-205ENSMUST00000228434 CntlnA2AM05 1397 aa17.19■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Synj1Q8CHC4 1574 aa17.19■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Pkd2O35245 966 aa17.19■□□□□ 0.34
Col20a1-205ENSMUST00000228434 ScribQ80U72 1612 aa17.18■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Trim30dE9PWL0 497 aa17.18■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Wwc2Q6NXJ0 1187 aa17.18■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Rapgef2Q8CHG7 1496 aa17.17■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Srpk2O54781 681 aaKnown RBP17.16■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Arhgap35Q91YM2 1499 aa17.16■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Gm20521D3Z5F7 333 aa17.14■□□□□ 0.34
Col20a1-205ENSMUST00000228434 Hsp90ab1P11499 724 aaKnown RBP17.14■□□□□ 0.33
Col20a1-205ENSMUST00000228434 Trim26Q99PN3 545 aa17.14■□□□□ 0.33
Col20a1-205ENSMUST00000228434 IqubQ8CDK3 788 aa17.14■□□□□ 0.33
Col20a1-205ENSMUST00000228434 Sin3aQ60520 1274 aaKnown RBP17.11■□□□□ 0.33
Col20a1-205ENSMUST00000228434 Mphosph9A6H5Y1 991 aa17.09■□□□□ 0.33
Col20a1-205ENSMUST00000228434 Ccdc27Q3V036 639 aa17.09■□□□□ 0.33
Col20a1-205ENSMUST00000228434 Map4P27546 1125 aaKnown RBP17.09■□□□□ 0.33
Col20a1-205ENSMUST00000228434 Fgd1P52734 960 aa17.08■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Rundc1Q0VDN7 615 aa17.08■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Cabp1Q9JLK7 227 aa17.07■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Apbb1Q9QXJ1 710 aa17.07■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Plppr3Q7TPB0 716 aa17.07■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Carmil1Q6EDY6 1374 aa17.06■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Neurod2Q62414 383 aa17.06■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Exoc6Q8R313 802 aa17.05■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Exosc9Q9JHI7 438 aaKnown RBP17.04■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Cux2P70298 1426 aa17.04■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Ppm1gQ61074 542 aa17.04■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Atad2bE9Q166 1460 aaKnown RBP17.03■□□□□ 0.32
Col20a1-205ENSMUST00000228434 DekQ7TNV0 380 aaKnown RBP17.02■□□□□ 0.32
Col20a1-205ENSMUST00000228434 Rpap1Q80TE0 1409 aa17.02■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Mbd3Q9Z2D8 285 aaKnown RBP17.01■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Smarca4Q3TKT4 1613 aaKnown RBP17.01■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Trak1Q6PD31 939 aa17.01■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Tcerg1Q8CGF7 1100 aaKnown RBP17■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Mapk8ip3Q9ESN9 1337 aa17■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Cttnbp2B9EJA2 1648 aa17■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Stk24Q99KH8 431 aa16.99■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Htatsf1Q8BGC0 757 aa16.99■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Safb2Q80YR5 991 aaKnown RBP16.98■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Rwdd1Q9CQK7 243 aa16.97■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Fhad1A6PWD2 1420 aa16.96■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Zscan21Q07231 555 aa16.96■□□□□ 0.31
Col20a1-205ENSMUST00000228434 Stag3O70576 1240 aa16.95■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Slc4a3P16283 1227 aa16.94■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Dbr1Q923B1 550 aa16.93■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Phldb1Q6PDH0 1371 aaKnown RBP16.93■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Supt16hQ920B9 1047 aa16.92■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Trim44Q9QXA7 346 aa16.92■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Mak16Q8BGS0 296 aaKnown RBP16.91■□□□□ 0.3
Col20a1-205ENSMUST00000228434 B4galnt3Q6L8S8 986 aa16.91■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Ifit1bl1D3Z6F0 470 aa16.91■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Chmp4bQ9D8B3 224 aaKnown RBP16.91■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Vsig10D3YX43 558 aa16.9■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Ccnb3Q810T2 1396 aa16.9■□□□□ 0.3
Col20a1-205ENSMUST00000228434 UacaQ8CGB3 1411 aa16.9■□□□□ 0.3
Col20a1-205ENSMUST00000228434 Tmf1B9EKI3 1091 aa16.9■□□□□ 0.3
Col20a1-205ENSMUST00000228434 NudcO35685 332 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms