RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Myt1lP97500 1187 aa38.49■■■■□ 3.75
Pcf11-205ENSMUST00000208255 Clip1Q922J3 1391 aa38.48■■■■□ 3.75
Pcf11-205ENSMUST00000208255 EprsQ8CGC7 1512 aaKnown RBP38.41■■■■□ 3.74
Pcf11-205ENSMUST00000208255 Polr1aO35134 1717 aaKnown RBP38.33■■■■□ 3.73
Pcf11-205ENSMUST00000208255 Adamts12Q811B3 1600 aa38.31■■■■□ 3.72
Pcf11-205ENSMUST00000208255 Shroom2A2ALU4 1481 aa38.3■■■■□ 3.72
Pcf11-205ENSMUST00000208255 TchhA0A0B4J1F9 1599 aa38.27■■■■□ 3.72
Pcf11-205ENSMUST00000208255 WizO88286 1684 aaKnown RBP38.25■■■■□ 3.71
Pcf11-205ENSMUST00000208255 Fgd6Q69ZL1 1399 aa38.24■■■■□ 3.71
Pcf11-205ENSMUST00000208255 Rpap1Q80TE0 1409 aa38.23■■■■□ 3.71
Pcf11-205ENSMUST00000208255 Abca16E9PWJ7 1678 aa38.2■■■■□ 3.71
Pcf11-205ENSMUST00000208255 CadpsQ80TJ1 1355 aa38.16■■■■□ 3.7
Pcf11-205ENSMUST00000208255 PxdnQ3UQ28 1475 aa38.15■■■■□ 3.7
Pcf11-205ENSMUST00000208255 Cux1P53564 1515 aa38.13■■■■□ 3.69
Pcf11-205ENSMUST00000208255 Pabpn1Q8CCS6 302 aaKnown RBP38.12■■■■□ 3.69
Pcf11-205ENSMUST00000208255 Gm7298A0A0N4SVU1 1476 aa38.11■■■■□ 3.69
Pcf11-205ENSMUST00000208255 Fyco1Q8VDC1 1437 aa38.1■■■■□ 3.69
Pcf11-205ENSMUST00000208255 Arhgap27A2AB59 869 aa38.09■■■■□ 3.69
Pcf11-205ENSMUST00000208255 Abcc2Q8VI47 1543 aa38.08■■■■□ 3.69
Pcf11-205ENSMUST00000208255 Soga1E1U8D0 1418 aa38.03■■■■□ 3.68
Pcf11-205ENSMUST00000208255 Ankrd26Q811D2 1581 aa37.99■■■■□ 3.67
Pcf11-205ENSMUST00000208255 Dnmt1P13864 1620 aaKnown RBP37.99■■■■□ 3.67
Pcf11-205ENSMUST00000208255 AknaQ80VW7 1404 aa37.98■■■■□ 3.67
Pcf11-205ENSMUST00000208255 Abca5Q8K448 1642 aa37.98■■■■□ 3.67
Pcf11-205ENSMUST00000208255 Pelp1Q9DBD5 1123 aaKnown RBP37.98■■■■□ 3.67
Pcf11-205ENSMUST00000208255 Map3k4O08648 1597 aa37.97■■■■□ 3.67
Pcf11-205ENSMUST00000208255 Eea1Q8BL66 1411 aa37.95■■■■□ 3.67
Pcf11-205ENSMUST00000208255 Setd5Q5XJV7 1441 aa37.93■■■■□ 3.66
Pcf11-205ENSMUST00000208255 Erich3F6QRE9 1637 aa37.9■■■■□ 3.66
Pcf11-205ENSMUST00000208255 Neo1P97798 1493 aa37.82■■■■□ 3.65
Pcf11-205ENSMUST00000208255 Slx4Q6P1D7 1565 aa37.82■■■■□ 3.65
Pcf11-205ENSMUST00000208255 Abcc1O35379 1528 aa37.82■■■■□ 3.64
Pcf11-205ENSMUST00000208255 BC005561E9Q5E2 1589 aa37.81■■■■□ 3.64
Pcf11-205ENSMUST00000208255 Ehmt2Q9Z148 1263 aaKnown RBP37.8■■■■□ 3.64
Pcf11-205ENSMUST00000208255 WrnO09053 1401 aa37.76■■■■□ 3.63
Pcf11-205ENSMUST00000208255 Arap1Q4LDD4 1452 aa37.75■■■■□ 3.63
Pcf11-205ENSMUST00000208255 Aebp1Q640N1 1128 aa37.7■■■■□ 3.63
Pcf11-205ENSMUST00000208255 Lmo7E9PYF4 1699 aaKnown RBP37.69■■■■□ 3.62
Pcf11-205ENSMUST00000208255 Gm14025A2AP89 1413 aa37.68■■■■□ 3.62
Pcf11-205ENSMUST00000208255 Chd1P40201 1711 aa37.66■■■■□ 3.62
Pcf11-205ENSMUST00000208255 Arhgef5E9Q7D5 1581 aa37.64■■■■□ 3.62
Pcf11-205ENSMUST00000208255 Jph4Q80WT0 628 aa37.64■■■■□ 3.62
Pcf11-205ENSMUST00000208255 Ap3b1Q9Z1T1 1105 aa37.61■■■■□ 3.61
Pcf11-205ENSMUST00000208255 Pcf11G3X9Z4 1553 aa37.6■■■■□ 3.61
Pcf11-205ENSMUST00000208255 Gapvd1Q6PAR5 1458 aa37.6■■■■□ 3.61
Pcf11-205ENSMUST00000208255 Arhgef12Q8R4H2 1543 aaKnown RBP37.58■■■■□ 3.61
Pcf11-205ENSMUST00000208255 Col17a1Q07563 1470 aa37.56■■■■□ 3.6
Pcf11-205ENSMUST00000208255 BlmO88700 1416 aa37.56■■■■□ 3.6
Pcf11-205ENSMUST00000208255 Ythdc2B2RR83 1445 aaKnown RBP37.52■■■■□ 3.6
Pcf11-205ENSMUST00000208255 Zcchc11B2RX14 1644 aaKnown RBP37.51■■■■□ 3.6
Pcf11-205ENSMUST00000208255 CntlnA2AM05 1397 aa37.49■■■■□ 3.59
Pcf11-205ENSMUST00000208255 Cep170Q6A065 1588 aa37.48■■■■□ 3.59
Pcf11-205ENSMUST00000208255 Kif27Q7M6Z4 1394 aa37.48■■■■□ 3.59
Pcf11-205ENSMUST00000208255 Rrbp1Q99PL5 1605 aaKnown RBP37.48■■■■□ 3.59
Pcf11-205ENSMUST00000208255 Tiam1Q60610 1591 aa37.43■■■■□ 3.58
Pcf11-205ENSMUST00000208255 Arhgap31A6X8Z5 1425 aa37.4■■■■□ 3.58
Pcf11-205ENSMUST00000208255 PtprtQ99M80 1454 aa37.36■■■■□ 3.57
Pcf11-205ENSMUST00000208255 Rapgef6Q5NCJ1 1609 aa37.34■■■■□ 3.57
Pcf11-205ENSMUST00000208255 Dnajc5P60904 198 aa37.34■■■■□ 3.57
Pcf11-205ENSMUST00000208255 Naip1Q9QWK5 1403 aa37.33■■■■□ 3.57
Pcf11-205ENSMUST00000208255 Ccdc141E9Q8Q6 1531 aa37.32■■■■□ 3.57
Pcf11-205ENSMUST00000208255 Peg3Q3URU2 1571 aa37.31■■■■□ 3.56
Pcf11-205ENSMUST00000208255 Gm156Q58A37 223 aa37.31■■■■□ 3.56
Pcf11-205ENSMUST00000208255 Adgrl3Q80TS3 1537 aa37.29■■■■□ 3.56
Pcf11-205ENSMUST00000208255 Fkbp15Q6P9Q6 1216 aaKnown RBP37.28■■■■□ 3.56
Pcf11-205ENSMUST00000208255 Ncoa2Q61026 1462 aa37.28■■■■□ 3.56
Pcf11-205ENSMUST00000208255 Plekhg3Q4VAC9 1341 aa37.27■■■■□ 3.56
Pcf11-205ENSMUST00000208255 Kdm5bQ80Y84 1544 aa37.24■■■■□ 3.55
Pcf11-205ENSMUST00000208255 AI481877A2ALV5 1481 aa37.18■■■■□ 3.54
Pcf11-205ENSMUST00000208255 Igf1rQ60751 1373 aa37.17■■■■□ 3.54
Pcf11-205ENSMUST00000208255 Gm1043A0A140LJC2 1431 aa37.15■■■■□ 3.54
Pcf11-205ENSMUST00000208255 Lmod2Q3UHZ5 550 aa37.12■■■■□ 3.53
Pcf11-205ENSMUST00000208255 Mroh2aD3Z750 1679 aa37.12■■■■□ 3.53
Pcf11-205ENSMUST00000208255 Arhgef11Q68FM7 1552 aa37.12■■■■□ 3.53
Pcf11-205ENSMUST00000208255 Magi1Q6RHR9 1471 aa37.1■■■■□ 3.53
Pcf11-205ENSMUST00000208255 Ncoa3O09000 1398 aa37.06■■■■□ 3.52
Pcf11-205ENSMUST00000208255 Mug1P28665 1476 aa37.05■■■■□ 3.52
Pcf11-205ENSMUST00000208255 Dhx57Q6P5D3 1388 aaKnown RBP37.03■■■■□ 3.52
Pcf11-205ENSMUST00000208255 Fancd2Q80V62 1450 aa37.02■■■■□ 3.52
Pcf11-205ENSMUST00000208255 Fam163aQ8CAA5 168 aa37.02■■■■□ 3.52
Pcf11-205ENSMUST00000208255 NhsB1AV60 1647 aa37.02■■■■□ 3.52
Pcf11-205ENSMUST00000208255 Gcc2Q8CHG3 1679 aa37■■■■□ 3.51
Pcf11-205ENSMUST00000208255 Cul7Q8VE73 1689 aa36.99■■■■□ 3.51
Pcf11-205ENSMUST00000208255 Ifnlr1Q8CGK5 535 aa36.96■■■■□ 3.51
Pcf11-205ENSMUST00000208255 UbtfP25976 765 aaKnown RBP36.96■■■■□ 3.51
Pcf11-205ENSMUST00000208255 Setbp1Q9Z180 1582 aa36.95■■■■□ 3.51
Pcf11-205ENSMUST00000208255 Kiaa1210E9Q0C6 1637 aa36.93■■■■□ 3.5
Pcf11-205ENSMUST00000208255 Acin1Q9JIX8 1338 aaKnown RBP36.93■■■■□ 3.5
Pcf11-205ENSMUST00000208255 Kiaa1551Q5DTW7 1521 aa36.9■■■■□ 3.5
Pcf11-205ENSMUST00000208255 Wdr7Q920I9 1489 aa36.9■■■■□ 3.5
Pcf11-205ENSMUST00000208255 Lrrc9Q8CDN9 1456 aa36.88■■■■□ 3.5
Pcf11-205ENSMUST00000208255 Prex2Q3LAC4 1598 aa36.88■■■■□ 3.49
Pcf11-205ENSMUST00000208255 NexmifQ5DTT1 1515 aa36.87■■■■□ 3.49
Pcf11-205ENSMUST00000208255 Cdc42bpaQ3UU96 1719 aa36.87■■■■□ 3.49
Pcf11-205ENSMUST00000208255 Mapkbp1Q6NS57 1503 aa36.86■■■■□ 3.49
Pcf11-205ENSMUST00000208255 Atp10dQ8K2X1 1416 aa36.85■■■■□ 3.49
Pcf11-205ENSMUST00000208255 Pprc1Q6NZN1 1644 aa36.84■■■■□ 3.49
Pcf11-205ENSMUST00000208255 Ak9G3UYQ4 1894 aa36.82■■■■□ 3.48
Pcf11-205ENSMUST00000208255 Ttbk1Q6PCN3 1308 aa36.81■■■■□ 3.48
Pcf11-205ENSMUST00000208255 Lmtk2Q3TYD6 1471 aa36.81■■■■□ 3.48
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms