RNA–Protein interactions for RNA: ENSMUST00000208091.1

Smarca2-231, Transcript of Probable global transcription activator SNF2L2, mouse

TSL 5 BASIC

Gene Smarca2, Length 1,140 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Smarca2-231	ENSMUST00000208091	Mpnd	Q3TV65	487 aa		13.18	□□□□□ -0.3
Smarca2-231	ENSMUST00000208091	Kcnn1	Q9EQR3	537 aa		13.17	□□□□□ -0.3
Smarca2-231	ENSMUST00000208091	Kif21a	Q9QXL2	1672 aa		13.17	□□□□□ -0.3
Smarca2-231	ENSMUST00000208091	Eif4g3	Q80XI3	1579 aa	Known RBP	13.16	□□□□□ -0.3
Smarca2-231	ENSMUST00000208091	Pabpn1	Q8CCS6	302 aa	Known RBP	13.16	□□□□□ -0.3
Smarca2-231	ENSMUST00000208091	Prr29	B1ARI9	187 aa		13.14	□□□□□ -0.31
Smarca2-231	ENSMUST00000208091	Cacnb1	Q8R3Z5	597 aa		13.14	□□□□□ -0.31
Smarca2-231	ENSMUST00000208091	Top2b	Q64511	1612 aa		13.13	□□□□□ -0.31
Smarca2-231	ENSMUST00000208091	Pelp1	Q9DBD5	1123 aa	Known RBP	13.09	□□□□□ -0.31
Smarca2-231	ENSMUST00000208091	Pitpnm1	O35954	1243 aa		13.07	□□□□□ -0.32
Smarca2-231	ENSMUST00000208091	Cux2	P70298	1426 aa		13.05	□□□□□ -0.32
Smarca2-231	ENSMUST00000208091	Skida1	Q80YR3	822 aa		13.03	□□□□□ -0.32
Smarca2-231	ENSMUST00000208091	Trim35	Q8C006	501 aa		12.98	□□□□□ -0.33
Smarca2-231	ENSMUST00000208091	Zcchc11	B2RX14	1644 aa	Known RBP	12.95	□□□□□ -0.34
Smarca2-231	ENSMUST00000208091	Pip4p2	Q9CZX7	257 aa		12.95	□□□□□ -0.34
Smarca2-231	ENSMUST00000208091	Kank3	Q9Z1P7	791 aa		12.94	□□□□□ -0.34
Smarca2-231	ENSMUST00000208091	Arhgef5	E9Q7D5	1581 aa		12.94	□□□□□ -0.34
Smarca2-231	ENSMUST00000208091	Kif15	Q6P9L6	1387 aa		12.92	□□□□□ -0.34
Smarca2-231	ENSMUST00000208091	Cttnbp2	B9EJA2	1648 aa		12.91	□□□□□ -0.34
Smarca2-231	ENSMUST00000208091	Cftr	P26361	1476 aa		12.91	□□□□□ -0.34
Smarca2-231	ENSMUST00000208091	Urb2	E9Q7L1	1524 aa	Known RBP	12.9	□□□□□ -0.34
Smarca2-231	ENSMUST00000208091	Ttbk1	Q6PCN3	1308 aa		12.89	□□□□□ -0.35
Smarca2-231	ENSMUST00000208091	Npm1	Q61937	292 aa	Known RBP	12.89	□□□□□ -0.35
Smarca2-231	ENSMUST00000208091	Plb1	Q3TTY0	1478 aa		12.88	□□□□□ -0.35
Smarca2-231	ENSMUST00000208091	Synj1	Q8CHC4	1574 aa		12.88	□□□□□ -0.35
Smarca2-231	ENSMUST00000208091	Tcf3	P15806	651 aa		12.87	□□□□□ -0.35
Smarca2-231	ENSMUST00000208091	Ppp1r37	Q8BKR5	712 aa		12.86	□□□□□ -0.35
Smarca2-231	ENSMUST00000208091	Clcn6	O35454	870 aa		12.84	□□□□□ -0.35
Smarca2-231	ENSMUST00000208091	Adgrl3	Q80TS3	1537 aa		12.78	□□□□□ -0.36
Smarca2-231	ENSMUST00000208091	Lrrc43	Q3V0L5	667 aa		12.75	□□□□□ -0.37
Smarca2-231	ENSMUST00000208091	Esf1	Q3V1V3	845 aa	Known RBP	12.75	□□□□□ -0.37
Smarca2-231	ENSMUST00000208091	Rusc2	Q80U22	1514 aa		12.72	□□□□□ -0.37
Smarca2-231	ENSMUST00000208091	Cep164	Q5DU05	1446 aa		12.72	□□□□□ -0.37
Smarca2-231	ENSMUST00000208091	Dhx29	Q6PGC1	1365 aa	Known RBP	12.72	□□□□□ -0.37
Smarca2-231	ENSMUST00000208091	Cadps2	Q8BYR5	1297 aa		12.72	□□□□□ -0.37
Smarca2-231	ENSMUST00000208091	Jarid2	Q62315	1234 aa		12.71	□□□□□ -0.37
Smarca2-231	ENSMUST00000208091	Il27	Q8K3I6	234 aa		12.69	□□□□□ -0.38
Smarca2-231	ENSMUST00000208091	Lamc3	Q9R0B6	1581 aa		12.69	□□□□□ -0.38
Smarca2-231	ENSMUST00000208091	Ptprt	Q99M80	1454 aa		12.68	□□□□□ -0.38
Smarca2-231	ENSMUST00000208091	Gm156	Q58A37	223 aa		12.68	□□□□□ -0.38
Smarca2-231	ENSMUST00000208091	Plekhg3	Q4VAC9	1341 aa		12.66	□□□□□ -0.38
Smarca2-231	ENSMUST00000208091	Nyap1	Q6PFX7	833 aa		12.66	□□□□□ -0.38
Smarca2-231	ENSMUST00000208091	Crocc2	F6XLV1	1638 aa		12.66	□□□□□ -0.38
Smarca2-231	ENSMUST00000208091	Ptprk	P35822	1457 aa		12.65	□□□□□ -0.38
Smarca2-231	ENSMUST00000208091	Cep170	Q6A065	1588 aa		12.64	□□□□□ -0.39
Smarca2-231	ENSMUST00000208091	Brd4	Q9ESU6	1400 aa	Known RBP	12.64	□□□□□ -0.39
Smarca2-231	ENSMUST00000208091	Ift140	E9PY46	1464 aa		12.59	□□□□□ -0.39
Smarca2-231	ENSMUST00000208091	Gapvd1	Q6PAR5	1458 aa		12.58	□□□□□ -0.4
Smarca2-231	ENSMUST00000208091	Ehmt2	Q9Z148	1263 aa	Known RBP	12.57	□□□□□ -0.4
Smarca2-231	ENSMUST00000208091	Setd1b	Q8CFT2	1985 aa		12.57	□□□□□ -0.4
Smarca2-231	ENSMUST00000208091	Lrpprc	Q6PB66	1392 aa	Known RBP	12.56	□□□□□ -0.4
Smarca2-231	ENSMUST00000208091	Ccdc136	Q3TVA9	1136 aa		12.55	□□□□□ -0.4
Smarca2-231	ENSMUST00000208091	Pprc1	Q6NZN1	1644 aa		12.55	□□□□□ -0.4
Smarca2-231	ENSMUST00000208091	Ccdc18	Q640L5	1455 aa		12.49	□□□□□ -0.41
Smarca2-231	ENSMUST00000208091	Ecm2	Q5FW85	670 aa		12.48	□□□□□ -0.41
Smarca2-231	ENSMUST00000208091	Disp1	Q3TDN0	1521 aa		12.47	□□□□□ -0.41
Smarca2-231	ENSMUST00000208091	Sra1	Q80VJ2	232 aa		12.45	□□□□□ -0.42
Smarca2-231	ENSMUST00000208091	Ppp1r18	Q8BQ30	594 aa		12.45	□□□□□ -0.42
Smarca2-231	ENSMUST00000208091	Snph	Q80U23	495 aa		12.44	□□□□□ -0.42
Smarca2-231	ENSMUST00000208091	Cypt1	Q8CH20	168 aa		12.43	□□□□□ -0.42
Smarca2-231	ENSMUST00000208091	Pogz	Q8BZH4	1409 aa	Known RBP	12.42	□□□□□ -0.42
Smarca2-231	ENSMUST00000208091	Camsap1	A2AHC3	1581 aa		12.41	□□□□□ -0.42
Smarca2-231	ENSMUST00000208091	Rapgef2	Q8CHG7	1496 aa		12.4	□□□□□ -0.42
Smarca2-231	ENSMUST00000208091	Dok7	Q18PE0	504 aa		12.4	□□□□□ -0.42
Smarca2-231	ENSMUST00000208091	Ythdc2	B2RR83	1445 aa	Known RBP	12.39	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Hnrnpul2	Q00PI9	745 aa	Known RBP	12.39	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Fgd6	Q69ZL1	1399 aa		12.39	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Nup160	Q9Z0W3	1402 aa	Known RBP	12.38	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Duox2	A2AQ99	1517 aa		12.38	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Cc2d2b	A0A286YDU8	1405 aa		12.37	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Akna	Q80VW7	1404 aa		12.37	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Golga3	P55937	1487 aa		12.37	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Chd1	P40201	1711 aa		12.36	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Rtl1	Q7M732	1744 aa		12.36	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Abcc1	O35379	1528 aa		12.36	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Ak9	G3UYQ4	1894 aa		12.35	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Setbp1	Q9Z180	1582 aa		12.34	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Pbrm1	Q8BSQ9	1634 aa	Known RBP	12.33	□□□□□ -0.43
Smarca2-231	ENSMUST00000208091	Tnn	Q80Z71	1560 aa		12.33	□□□□□ -0.44
Smarca2-231	ENSMUST00000208091	Alpk3	Q924C5	1678 aa		12.32	□□□□□ -0.44
Smarca2-231	ENSMUST00000208091	Cyb5rl	B1AS42	316 aa		12.31	□□□□□ -0.44
Smarca2-231	ENSMUST00000208091	Top2a	Q01320	1528 aa	Known RBP	12.31	□□□□□ -0.44
Smarca2-231	ENSMUST00000208091	Samd9l	Q69Z37	1561 aa		12.3	□□□□□ -0.44
Smarca2-231	ENSMUST00000208091	Mycn	P03966	462 aa	Known RBP	12.29	□□□□□ -0.44
Smarca2-231	ENSMUST00000208091	Aqr	Q8CFQ3	1481 aa	Known RBP	12.28	□□□□□ -0.44
Smarca2-231	ENSMUST00000208091	Rad54l2	Q99NG0	1466 aa		12.27	□□□□□ -0.44
Smarca2-231	ENSMUST00000208091	Ccdc88b	Q4QRL3	1481 aa		12.26	□□□□□ -0.45
Smarca2-231	ENSMUST00000208091	Mlec	Q6ZQI3	291 aa	Known RBP	12.22	□□□□□ -0.45
Smarca2-231	ENSMUST00000208091	Grin2a	P35436	1464 aa		12.21	□□□□□ -0.45
Smarca2-231	ENSMUST00000208091	Soga1	E1U8D0	1418 aa		12.21	□□□□□ -0.45
Smarca2-231	ENSMUST00000208091	Cadps	Q80TJ1	1355 aa		12.21	□□□□□ -0.45
Smarca2-231	ENSMUST00000208091	Pde4d	Q01063	747 aa		12.21	□□□□□ -0.45
Smarca2-231	ENSMUST00000208091	Repin1	Q5U4E2	545 aa		12.21	□□□□□ -0.45
Smarca2-231	ENSMUST00000208091	Foxp4	Q9DBY0	795 aa	Known RBP	12.21	□□□□□ -0.45
Smarca2-231	ENSMUST00000208091	Fbxo41	Q6NS60	873 aa		12.2	□□□□□ -0.46
Smarca2-231	ENSMUST00000208091	Adgb	G3UZ78	1657 aa		12.19	□□□□□ -0.46
Smarca2-231	ENSMUST00000208091	Dnajc5g	Q8C632	165 aa		12.19	□□□□□ -0.46
Smarca2-231	ENSMUST00000208091	Magi3	Q9EQJ9	1476 aa		12.19	□□□□□ -0.46
Smarca2-231	ENSMUST00000208091	Fam117b	Q3U3E2	584 aa		12.17	□□□□□ -0.46
Smarca2-231	ENSMUST00000208091	Hdac5	Q9Z2V6	1113 aa		12.17	□□□□□ -0.46

Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms