Protein–RNA interactions for Protein: Q5U4E2

Repin1, Replication initiator 1, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Repin1Q5U4E2 Gm25239-201ENSMUST00000174915 86 ntBASIC37.38■■■■□ 3.57
Repin1Q5U4E2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Repin1Q5U4E2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Repin1Q5U4E2 Gm24109-201ENSMUST00000175489 103 ntBASIC33.11■■■□□ 2.89
Repin1Q5U4E2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Repin1Q5U4E2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Repin1Q5U4E2 Gm15042-201ENSMUST00000120212 883 ntBASIC31.6■■■□□ 2.65
Repin1Q5U4E2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Repin1Q5U4E2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Repin1Q5U4E2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.19■■■□□ 2.58
Repin1Q5U4E2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Repin1Q5U4E2 Gm23366-201ENSMUST00000175022 89 ntBASIC31.13■■■□□ 2.57
Repin1Q5U4E2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
Repin1Q5U4E2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Repin1Q5U4E2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.64■■■□□ 2.5
Repin1Q5U4E2 Gm15045-201ENSMUST00000117359 883 ntBASIC30.58■■■□□ 2.49
Repin1Q5U4E2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.08■■■□□ 2.41
Repin1Q5U4E2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Repin1Q5U4E2 Gm25238-201ENSMUST00000174914 89 ntBASIC29.81■■■□□ 2.36
Repin1Q5U4E2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Repin1Q5U4E2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.56■■■□□ 2.32
Repin1Q5U4E2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Repin1Q5U4E2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Repin1Q5U4E2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Repin1Q5U4E2 Gm25262-201ENSMUST00000174934 133 ntBASIC29.27■■■□□ 2.28
Repin1Q5U4E2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
Repin1Q5U4E2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
Repin1Q5U4E2 Gm26115-201ENSMUST00000175605 87 ntBASIC29.03■■■□□ 2.24
Repin1Q5U4E2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.96■■■□□ 2.23
Repin1Q5U4E2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.89■■■□□ 2.22
Repin1Q5U4E2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.7■■■□□ 2.18
Repin1Q5U4E2 Gm8109-201ENSMUST00000194076 746 ntBASIC28.68■■■□□ 2.18
Repin1Q5U4E2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Repin1Q5U4E2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Repin1Q5U4E2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Repin1Q5U4E2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.39■■■□□ 2.14
Repin1Q5U4E2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.21■■■□□ 2.11
Repin1Q5U4E2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.2■■■□□ 2.1
Repin1Q5U4E2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Repin1Q5U4E2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.82■■■□□ 2.04
Repin1Q5U4E2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Repin1Q5U4E2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Repin1Q5U4E2 Rab21-202ENSMUST00000218831 843 ntBASIC27.72■■■□□ 2.03
Repin1Q5U4E2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Repin1Q5U4E2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Repin1Q5U4E2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Repin1Q5U4E2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Repin1Q5U4E2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.55■■■□□ 2
Repin1Q5U4E2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.53■■■□□ 2
Repin1Q5U4E2 Gm24804-201ENSMUST00000174982 85 ntBASIC27.53■■■□□ 2
Repin1Q5U4E2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Repin1Q5U4E2 Gm27325-201ENSMUST00000175467 74 ntBASIC27.39■■□□□ 1.98
Repin1Q5U4E2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Repin1Q5U4E2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.34■■□□□ 1.97
Repin1Q5U4E2 Zfp131-205ENSMUST00000223812 663 ntBASIC27.3■■□□□ 1.96
Repin1Q5U4E2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Repin1Q5U4E2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.26■■□□□ 1.95
Repin1Q5U4E2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Repin1Q5U4E2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Repin1Q5U4E2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Repin1Q5U4E2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Repin1Q5U4E2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Repin1Q5U4E2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.13■■□□□ 1.93
Repin1Q5U4E2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Repin1Q5U4E2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Repin1Q5U4E2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Repin1Q5U4E2 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.01■■□□□ 1.91
Repin1Q5U4E2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Repin1Q5U4E2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.98■■□□□ 1.91
Repin1Q5U4E2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Repin1Q5U4E2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Repin1Q5U4E2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Repin1Q5U4E2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Repin1Q5U4E2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.78■■□□□ 1.88
Repin1Q5U4E2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
Repin1Q5U4E2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.76■■□□□ 1.87
Repin1Q5U4E2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Repin1Q5U4E2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.72■■□□□ 1.87
Repin1Q5U4E2 Gm27322-201ENSMUST00000184007 104 ntBASIC26.7■■□□□ 1.86
Repin1Q5U4E2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Repin1Q5U4E2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Repin1Q5U4E2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Repin1Q5U4E2 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.63■■□□□ 1.85
Repin1Q5U4E2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Repin1Q5U4E2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.6■■□□□ 1.85
Repin1Q5U4E2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Repin1Q5U4E2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Repin1Q5U4E2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Repin1Q5U4E2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Repin1Q5U4E2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Repin1Q5U4E2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Repin1Q5U4E2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Repin1Q5U4E2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Repin1Q5U4E2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Repin1Q5U4E2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.49■■□□□ 1.83
Repin1Q5U4E2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.47■■□□□ 1.83
Repin1Q5U4E2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Repin1Q5U4E2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Repin1Q5U4E2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Repin1Q5U4E2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.33■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms