Protein–RNA interactions for Protein: Q80VJ2

Sra1, Steroid receptor RNA activator 1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sra1Q80VJ2 Gm25239-201ENSMUST00000174915 86 ntBASIC36.18■■■■□ 3.38
Sra1Q80VJ2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Sra1Q80VJ2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Sra1Q80VJ2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Sra1Q80VJ2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Sra1Q80VJ2 Gm15042-201ENSMUST00000120212 883 ntBASIC31.94■■■□□ 2.7
Sra1Q80VJ2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Sra1Q80VJ2 Gm15045-201ENSMUST00000117359 883 ntBASIC31.26■■■□□ 2.59
Sra1Q80VJ2 Gm24109-201ENSMUST00000175489 103 ntBASIC31.16■■■□□ 2.58
Sra1Q80VJ2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Sra1Q80VJ2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Sra1Q80VJ2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Sra1Q80VJ2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Sra1Q80VJ2 Psd-208ENSMUST00000224556 2034 ntBASIC30.31■■■□□ 2.44
Sra1Q80VJ2 Gm23366-201ENSMUST00000175022 89 ntBASIC30.29■■■□□ 2.44
Sra1Q80VJ2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.27■■■□□ 2.44
Sra1Q80VJ2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Sra1Q80VJ2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Sra1Q80VJ2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Sra1Q80VJ2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Sra1Q80VJ2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Sra1Q80VJ2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Sra1Q80VJ2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Sra1Q80VJ2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
Sra1Q80VJ2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Sra1Q80VJ2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Sra1Q80VJ2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.5■■■□□ 2.31
Sra1Q80VJ2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Sra1Q80VJ2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Sra1Q80VJ2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.35■■■□□ 2.29
Sra1Q80VJ2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Sra1Q80VJ2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.13■■■□□ 2.25
Sra1Q80VJ2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Sra1Q80VJ2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Sra1Q80VJ2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.85■■■□□ 2.21
Sra1Q80VJ2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Sra1Q80VJ2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Sra1Q80VJ2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.62■■■□□ 2.17
Sra1Q80VJ2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.62■■■□□ 2.17
Sra1Q80VJ2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Sra1Q80VJ2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Sra1Q80VJ2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Sra1Q80VJ2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Sra1Q80VJ2 Gm25238-201ENSMUST00000174914 89 ntBASIC28.44■■■□□ 2.14
Sra1Q80VJ2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.42■■■□□ 2.14
Sra1Q80VJ2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sra1Q80VJ2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Sra1Q80VJ2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Sra1Q80VJ2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.32■■■□□ 2.12
Sra1Q80VJ2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sra1Q80VJ2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sra1Q80VJ2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Sra1Q80VJ2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Sra1Q80VJ2 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.13■■■□□ 2.09
Sra1Q80VJ2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sra1Q80VJ2 Gm27325-201ENSMUST00000175467 74 ntBASIC28.04■■■□□ 2.08
Sra1Q80VJ2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Sra1Q80VJ2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.99■■■□□ 2.07
Sra1Q80VJ2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Sra1Q80VJ2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
Sra1Q80VJ2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sra1Q80VJ2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sra1Q80VJ2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.89■■■□□ 2.06
Sra1Q80VJ2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Sra1Q80VJ2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.82■■■□□ 2.04
Sra1Q80VJ2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sra1Q80VJ2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Sra1Q80VJ2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Sra1Q80VJ2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.69■■■□□ 2.02
Sra1Q80VJ2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Sra1Q80VJ2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Sra1Q80VJ2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.64■■■□□ 2.02
Sra1Q80VJ2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.64■■■□□ 2.02
Sra1Q80VJ2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Sra1Q80VJ2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Sra1Q80VJ2 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.56■■■□□ 2
Sra1Q80VJ2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Sra1Q80VJ2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Sra1Q80VJ2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Sra1Q80VJ2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Sra1Q80VJ2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Sra1Q80VJ2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.36■■□□□ 1.97
Sra1Q80VJ2 Rab21-202ENSMUST00000218831 843 ntBASIC27.33■■□□□ 1.97
Sra1Q80VJ2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Sra1Q80VJ2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Sra1Q80VJ2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.22■■□□□ 1.95
Sra1Q80VJ2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Sra1Q80VJ2 Gm25262-201ENSMUST00000174934 133 ntBASIC27.12■■□□□ 1.93
Sra1Q80VJ2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sra1Q80VJ2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sra1Q80VJ2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Sra1Q80VJ2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Sra1Q80VJ2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.03■■□□□ 1.92
Sra1Q80VJ2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Sra1Q80VJ2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Sra1Q80VJ2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Sra1Q80VJ2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.99■■□□□ 1.91
Sra1Q80VJ2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Sra1Q80VJ2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.9■■□□□ 1.9
Sra1Q80VJ2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms