RNA–Protein interactions for RNA: ENSMUST00000207054.1

Smarca2-220, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-220ENSMUST00000207054 Esf1Q3V1V3 845 aaKnown RBP7.64□□□□□ -1.19
Smarca2-220ENSMUST00000207054 NrdcQ8BHG1 1161 aa7.63□□□□□ -1.19
Smarca2-220ENSMUST00000207054 BccipQ9CWI3 316 aa7.62□□□□□ -1.19
Smarca2-220ENSMUST00000207054 Mkrn3Q60764 544 aa7.62□□□□□ -1.19
Smarca2-220ENSMUST00000207054 Anks4bQ8K3X6 423 aa7.62□□□□□ -1.19
Smarca2-220ENSMUST00000207054 MycnP03966 462 aaKnown RBP7.61□□□□□ -1.19
Smarca2-220ENSMUST00000207054 TimelessQ9R1X4 1197 aa7.61□□□□□ -1.19
Smarca2-220ENSMUST00000207054 Ferd3lQ923Z4 168 aa7.61□□□□□ -1.19
Smarca2-220ENSMUST00000207054 Hdac5Q9Z2V6 1113 aa7.61□□□□□ -1.19
Smarca2-220ENSMUST00000207054 Eif5bQ05D44 1216 aaKnown RBP7.58□□□□□ -1.2
Smarca2-220ENSMUST00000207054 UbtfP25976 765 aaKnown RBP7.57□□□□□ -1.2
Smarca2-220ENSMUST00000207054 Fam117bQ3U3E2 584 aa7.57□□□□□ -1.2
Smarca2-220ENSMUST00000207054 Repin1Q5U4E2 545 aa7.57□□□□□ -1.2
Smarca2-220ENSMUST00000207054 Pde4dQ01063 747 aa7.56□□□□□ -1.2
Smarca2-220ENSMUST00000207054 Rtl1Q7M732 1744 aa7.56□□□□□ -1.2
Smarca2-220ENSMUST00000207054 HrcG5E8J6 738 aa7.53□□□□□ -1.2
Smarca2-220ENSMUST00000207054 Scaf1Q5U4C3 1256 aaKnown RBP7.53□□□□□ -1.2
Smarca2-220ENSMUST00000207054 Pelp1Q9DBD5 1123 aaKnown RBP7.53□□□□□ -1.2
Smarca2-220ENSMUST00000207054 Noa1Q9JJG9 693 aaKnown RBP7.53□□□□□ -1.2
Smarca2-220ENSMUST00000207054 Zfp777B9EKF4 885 aa7.51□□□□□ -1.21
Smarca2-220ENSMUST00000207054 Znf704Q9ERQ3 566 aa7.51□□□□□ -1.21
Smarca2-220ENSMUST00000207054 Rgl2Q61193 778 aa7.51□□□□□ -1.21
Smarca2-220ENSMUST00000207054 Abcc8B2RUS7 1588 aa7.51□□□□□ -1.21
Smarca2-220ENSMUST00000207054 Ripply1Q2WG77 201 aa7.5□□□□□ -1.21
Smarca2-220ENSMUST00000207054 Zeb1Q64318 1117 aa7.5□□□□□ -1.21
Smarca2-220ENSMUST00000207054 Abcc9P70170 1546 aa7.48□□□□□ -1.21
Smarca2-220ENSMUST00000207054 Sra1Q80VJ2 232 aa7.45□□□□□ -1.22
Smarca2-220ENSMUST00000207054 Slc24a1Q91WD8 1130 aa7.44□□□□□ -1.22
Smarca2-220ENSMUST00000207054 Ccdc180J3QNE4 1664 aa7.44□□□□□ -1.22
Smarca2-220ENSMUST00000207054 Slc4a5E9Q3M5 1116 aa7.43□□□□□ -1.22
Smarca2-220ENSMUST00000207054 UncxO08934 530 aa7.42□□□□□ -1.22
Smarca2-220ENSMUST00000207054 Plcd4Q8K3R3 807 aa7.42□□□□□ -1.22
Smarca2-220ENSMUST00000207054 Znf316Q6PGE4 1016 aa7.41□□□□□ -1.22
Smarca2-220ENSMUST00000207054 Cngb1E1AZ71 1325 aa7.4□□□□□ -1.22
Smarca2-220ENSMUST00000207054 Stk3Q9JI10 497 aa7.4□□□□□ -1.22
Smarca2-220ENSMUST00000207054 ScribQ80U72 1612 aa7.4□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Dnajc5P60904 198 aa7.39□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Zbtb38Q3LR78 1197 aa7.39□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Q8BT18 775 aa7.38□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Ccdc136Q3TVA9 1136 aa7.38□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Zbtb7bQ64321 544 aa7.36□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Pitpnm1O35954 1243 aa7.35□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Map4k4P97820 1233 aaKnown RBP7.35□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Gm13697A2AK42 830 aa7.34□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Gtf3c3Q3TMP1 882 aa7.34□□□□□ -1.23
Smarca2-220ENSMUST00000207054 P3h3Q8CG70 732 aa7.34□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Spryd3E9Q9B3 442 aa7.34□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Trim35Q8C006 501 aa7.34□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Rsph6aQ8CDR2 708 aa7.34□□□□□ -1.23
Smarca2-220ENSMUST00000207054 Cadps2Q8BYR5 1297 aa7.33□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Os9Q8K2C7 672 aa7.33□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Stk25Q9Z2W1 426 aa7.33□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Ubap1lG3UW59 384 aa7.33□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Aebp2Q9Z248 504 aaKnown RBP7.33□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Stag3O70576 1240 aa7.32□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Atad2Q8CDM1 1040 aa7.32□□□□□ -1.24
Smarca2-220ENSMUST00000207054 PygbQ8CI94 843 aaKnown RBP7.31□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Cdk11bP24788 784 aaKnown RBP7.3□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Ncbp3Q8BZR9 615 aaKnown RBP7.3□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Il27Q8K3I6 234 aa7.3□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Hnrnpul2Q00PI9 745 aaKnown RBP7.29□□□□□ -1.24
Smarca2-220ENSMUST00000207054 Nyap1Q6PFX7 833 aa7.29□□□□□ -1.24
Smarca2-220ENSMUST00000207054 ChgaP26339 463 aaKnown RBP7.27□□□□□ -1.25
Smarca2-220ENSMUST00000207054 4930567H17RikQ3V0K5 233 aa7.27□□□□□ -1.25
Smarca2-220ENSMUST00000207054 Tmem132aQ922P8 1018 aa7.27□□□□□ -1.25
Smarca2-220ENSMUST00000207054 Pdap1Q3UHX2 181 aaKnown RBP7.27□□□□□ -1.25
Smarca2-220ENSMUST00000207054 Stk24Q99KH8 431 aa7.27□□□□□ -1.25
Smarca2-220ENSMUST00000207054 Dcaf1Q80TR8 1506 aa7.26□□□□□ -1.25
Smarca2-220ENSMUST00000207054 Rbm10Q99KG3 930 aaKnown RBP7.26□□□□□ -1.25
Smarca2-220ENSMUST00000207054 Chrm1P12657 460 aa7.25□□□□□ -1.25
Smarca2-220ENSMUST00000207054 AampJ3QN89 436 aa7.24□□□□□ -1.25
Smarca2-220ENSMUST00000207054 VaspP70460 375 aaKnown RBP7.23□□□□□ -1.25
Smarca2-220ENSMUST00000207054 Ube2q2Q8K2Z8 378 aa7.23□□□□□ -1.25
Smarca2-220ENSMUST00000207054 CrebzfQ91ZR3 358 aa7.23□□□□□ -1.25
Smarca2-220ENSMUST00000207054 Samd1D3YXK1 519 aa7.22□□□□□ -1.25
Smarca2-220ENSMUST00000207054 NgefQ8CHT1 710 aa7.22□□□□□ -1.25
Smarca2-220ENSMUST00000207054 Vgll3P85442 326 aa7.21□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Ipo4Q8VI75 1082 aa7.21□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Slc7a3P70423 618 aa7.19□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Mier1Q5UAK0 511 aa7.19□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Ric3Q8BPM6 367 aa7.17□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Sall2Q9QX96 1004 aa7.17□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Arhgef1Q61210 920 aaKnown RBP7.17□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Sgip1Q8VD37 806 aa7.17□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Pcdhb17Q91VD8 799 aa7.17□□□□□ -1.26
Smarca2-220ENSMUST00000207054 NacadQ5SWP3 1504 aa7.17□□□□□ -1.26
Smarca2-220ENSMUST00000207054 NefmP08553 848 aa7.16□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Rtl5Q5DTT4 599 aa7.16□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Irx3P81067 507 aa7.16□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Kcnn1Q9EQR3 537 aa7.15□□□□□ -1.26
Smarca2-220ENSMUST00000207054 Wdr66E9Q743 1299 aa7.15□□□□□ -1.27
Smarca2-220ENSMUST00000207054 Cnksr2Q80YA9 1032 aa7.14□□□□□ -1.27
Smarca2-220ENSMUST00000207054 Fbxo3Q9DC63 480 aa7.13□□□□□ -1.27
Smarca2-220ENSMUST00000207054 Slc24a3Q99PD7 645 aa7.13□□□□□ -1.27
Smarca2-220ENSMUST00000207054 Upf2A2AT37 1269 aaKnown RBP7.12□□□□□ -1.27
Smarca2-220ENSMUST00000207054 SafbD3YXK2 937 aaKnown RBP7.11□□□□□ -1.27
Smarca2-220ENSMUST00000207054 Zbtb7cQ8VCZ7 619 aa7.11□□□□□ -1.27
Smarca2-220ENSMUST00000207054 4933416C03RikQ3V063 378 aa7.1□□□□□ -1.27
Smarca2-220ENSMUST00000207054 Kank3Q9Z1P7 791 aa7.1□□□□□ -1.27
Smarca2-220ENSMUST00000207054 Ak7Q9D2H2 614 aa7.1□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms