RNA–Protein interactions for RNA: ENSMUST00000207054.1

Smarca2-220, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-220ENSMUST00000207054 Chic1Q8CBW7 227 aa13.02□□□□□ -0.33
Smarca2-220ENSMUST00000207054 Mapk8ip2Q9ERE9 830 aa12.32□□□□□ -0.44
Smarca2-220ENSMUST00000207054 Phf23Q8BSN5 401 aa11.91□□□□□ -0.5
Smarca2-220ENSMUST00000207054 Plppr3Q7TPB0 716 aa11.74□□□□□ -0.53
Smarca2-220ENSMUST00000207054 Gab3Q8BSM5 595 aa11.42□□□□□ -0.58
Smarca2-220ENSMUST00000207054 Kcna4Q61423 654 aa11.14□□□□□ -0.63
Smarca2-220ENSMUST00000207054 Senp3Q9EP97 568 aaKnown RBP11.03□□□□□ -0.64
Smarca2-220ENSMUST00000207054 Ppargc1bQ8VHJ7 1014 aa10.22□□□□□ -0.77
Smarca2-220ENSMUST00000207054 Dmrt2Q8BG36 561 aa9.93□□□□□ -0.82
Smarca2-220ENSMUST00000207054 Ube2uB1AUC4 352 aa9.78□□□□□ -0.84
Smarca2-220ENSMUST00000207054 Trap1aP19473 224 aa9.67□□□□□ -0.86
Smarca2-220ENSMUST00000207054 Slc4a1apE9PX68 744 aa9.64□□□□□ -0.87
Smarca2-220ENSMUST00000207054 Hoxd11P23813 323 aa9.51□□□□□ -0.89
Smarca2-220ENSMUST00000207054 Atf5O70191 283 aa9.39□□□□□ -0.91
Smarca2-220ENSMUST00000207054 Fam71e1A1L3C1 212 aa9.28□□□□□ -0.92
Smarca2-220ENSMUST00000207054 Ppp4r2Q0VGB7 417 aa9.14□□□□□ -0.95
Smarca2-220ENSMUST00000207054 1700123L14RikQ3V2K7 440 aa9.13□□□□□ -0.95
Smarca2-220ENSMUST00000207054 Chrna2Q91X60 512 aa9.1□□□□□ -0.95
Smarca2-220ENSMUST00000207054 Hs6st3Q9QYK4 470 aa9.07□□□□□ -0.96
Smarca2-220ENSMUST00000207054 Ehmt2Q9Z148 1263 aaKnown RBP9.05□□□□□ -0.96
Smarca2-220ENSMUST00000207054 Znf219Q6IQX8 726 aa9.02□□□□□ -0.97
Smarca2-220ENSMUST00000207054 Dnajc5bQ9CQ94 199 aa9□□□□□ -0.97
Smarca2-220ENSMUST00000207054 Rsph4aQ8BYM7 716 aa9□□□□□ -0.97
Smarca2-220ENSMUST00000207054 Fam163aQ8CAA5 168 aa8.96□□□□□ -0.97
Smarca2-220ENSMUST00000207054 Nlrp6Q91WS2 869 aa8.94□□□□□ -0.98
Smarca2-220ENSMUST00000207054 Pde4cQ3UEI1 686 aa8.93□□□□□ -0.98
Smarca2-220ENSMUST00000207054 Rimbp2Q80U40 1072 aa8.92□□□□□ -0.98
Smarca2-220ENSMUST00000207054 AcrbpQ3V140 540 aa8.91□□□□□ -0.98
Smarca2-220ENSMUST00000207054 Cdca7Q9D0M2 382 aa8.88□□□□□ -0.99
Smarca2-220ENSMUST00000207054 Tshz2Q68FE9 1030 aa8.76□□□□□ -1.01
Smarca2-220ENSMUST00000207054 Bach1P97302 739 aa8.74□□□□□ -1.01
Smarca2-220ENSMUST00000207054 Rtn4Q99P72 1162 aaKnown RBP8.68□□□□□ -1.02
Smarca2-220ENSMUST00000207054 DiexfQ8BTT6 772 aaKnown RBP8.65□□□□□ -1.03
Smarca2-220ENSMUST00000207054 Prm3Q62100 101 aa8.62□□□□□ -1.03
Smarca2-220ENSMUST00000207054 C1qtnf12Q8R2Z0 308 aa8.54□□□□□ -1.04
Smarca2-220ENSMUST00000207054 Riok3Q9DBU3 519 aaKnown RBP8.53□□□□□ -1.04
Smarca2-220ENSMUST00000207054 WdpcpQ8C456 722 aa8.52□□□□□ -1.05
Smarca2-220ENSMUST00000207054 Akt1s1Q9D1F4 257 aa8.52□□□□□ -1.05
Smarca2-220ENSMUST00000207054 ArsiQ32KI9 573 aa8.51□□□□□ -1.05
Smarca2-220ENSMUST00000207054 Pcgf6Q99NA9 353 aa8.51□□□□□ -1.05
Smarca2-220ENSMUST00000207054 Prdm10Q3UTQ7 1184 aa8.49□□□□□ -1.05
Smarca2-220ENSMUST00000207054 Ecm2Q5FW85 670 aa8.49□□□□□ -1.05
Smarca2-220ENSMUST00000207054 MyclP10166 368 aa8.48□□□□□ -1.05
Smarca2-220ENSMUST00000207054 Rhox8Q6VSS7 320 aa8.47□□□□□ -1.05
Smarca2-220ENSMUST00000207054 Styxl1Q9DAR2 321 aa8.47□□□□□ -1.05
Smarca2-220ENSMUST00000207054 Slc34a2Q9DBP0 697 aa8.46□□□□□ -1.06
Smarca2-220ENSMUST00000207054 Npm2Q80W85 207 aa8.45□□□□□ -1.06
Smarca2-220ENSMUST00000207054 Ms4a5Q810P8 197 aa8.45□□□□□ -1.06
Smarca2-220ENSMUST00000207054 Sox12Q04890 314 aa8.37□□□□□ -1.07
Smarca2-220ENSMUST00000207054 Bcl11aQ9QYE3 773 aa8.35□□□□□ -1.07
Smarca2-220ENSMUST00000207054 Amer1Q7TS75 1132 aa8.34□□□□□ -1.08
Smarca2-220ENSMUST00000207054 Rpgrip1Q9EPQ2 1331 aa8.31□□□□□ -1.08
Smarca2-220ENSMUST00000207054 Myt1Q8CFC2 1127 aa8.3□□□□□ -1.08
Smarca2-220ENSMUST00000207054 CenpbP27790 599 aa8.29□□□□□ -1.08
Smarca2-220ENSMUST00000207054 PrkcshO08795 521 aa8.26□□□□□ -1.09
Smarca2-220ENSMUST00000207054 Trim41Q5NCC3 630 aa8.21□□□□□ -1.09
Smarca2-220ENSMUST00000207054 Ttbk1Q6PCN3 1308 aa8.16□□□□□ -1.1
Smarca2-220ENSMUST00000207054 G430095P16RikE9Q913 147 aa8.15□□□□□ -1.1
Smarca2-220ENSMUST00000207054 Tcf3P15806 651 aa8.13□□□□□ -1.11
Smarca2-220ENSMUST00000207054 CatipB9EKE5 520 aa8.09□□□□□ -1.11
Smarca2-220ENSMUST00000207054 Gm35339A0A140LHH9 1649 aa8.08□□□□□ -1.12
Smarca2-220ENSMUST00000207054 Prdm16A2A935 1275 aa8.08□□□□□ -1.12
Smarca2-220ENSMUST00000207054 Las1lA2BE28 776 aaKnown RBP8.07□□□□□ -1.12
Smarca2-220ENSMUST00000207054 ArxO35085 564 aa8.07□□□□□ -1.12
Smarca2-220ENSMUST00000207054 MpndQ3TV65 487 aa8.02□□□□□ -1.13
Smarca2-220ENSMUST00000207054 Zbtb7aO88939 569 aaKnown RBP8.01□□□□□ -1.13
Smarca2-220ENSMUST00000207054 Ifnlr1Q8CGK5 535 aa8.01□□□□□ -1.13
Smarca2-220ENSMUST00000207054 Neurod1Q60867 357 aa8□□□□□ -1.13
Smarca2-220ENSMUST00000207054 Arid3aQ62431 601 aa7.99□□□□□ -1.13
Smarca2-220ENSMUST00000207054 Ppp1r37Q8BKR5 712 aa7.98□□□□□ -1.13
Smarca2-220ENSMUST00000207054 Npm3Q9CPP0 175 aaKnown RBP7.96□□□□□ -1.14
Smarca2-220ENSMUST00000207054 Taok2Q6ZQ29 1240 aa7.95□□□□□ -1.14
Smarca2-220ENSMUST00000207054 Fbln2P37889 1221 aa7.95□□□□□ -1.14
Smarca2-220ENSMUST00000207054 Egfem1Q8C088 590 aa7.93□□□□□ -1.14
Smarca2-220ENSMUST00000207054 Ppp6r1Q7TSI3 856 aa7.92□□□□□ -1.14
Smarca2-220ENSMUST00000207054 Abcb7Q61102 752 aaKnown RBP7.9□□□□□ -1.14
Smarca2-220ENSMUST00000207054 Gm38655A0A286YDK6 273 aa7.86□□□□□ -1.15
Smarca2-220ENSMUST00000207054 Vsig10D3YX43 558 aa7.86□□□□□ -1.15
Smarca2-220ENSMUST00000207054 Gtpbp6Q3U6U5 514 aa7.85□□□□□ -1.15
Smarca2-220ENSMUST00000207054 GapdhsQ64467 440 aa7.85□□□□□ -1.15
Smarca2-220ENSMUST00000207054 Grwd1Q810D6 446 aaKnown RBP7.84□□□□□ -1.15
Smarca2-220ENSMUST00000207054 Zbtb12Q9Z150 459 aa7.84□□□□□ -1.15
Smarca2-220ENSMUST00000207054 Skap1Q3UUV5 355 aa7.82□□□□□ -1.16
Smarca2-220ENSMUST00000207054 Pknox2Q8BG99 474 aa7.81□□□□□ -1.16
Smarca2-220ENSMUST00000207054 Acin1Q9JIX8 1338 aaKnown RBP7.8□□□□□ -1.16
Smarca2-220ENSMUST00000207054 Csrnp3P59055 597 aa7.78□□□□□ -1.16
Smarca2-220ENSMUST00000207054 Zbtb22Q9Z0G7 638 aa7.76□□□□□ -1.17
Smarca2-220ENSMUST00000207054 Nkx1-1G3UXB3 402 aa7.74□□□□□ -1.17
Smarca2-220ENSMUST00000207054 Gtf3c5Q8R2T8 520 aa7.74□□□□□ -1.17
Smarca2-220ENSMUST00000207054 Fgd1P52734 960 aa7.71□□□□□ -1.18
Smarca2-220ENSMUST00000207054 Skida1Q80YR3 822 aa7.71□□□□□ -1.18
Smarca2-220ENSMUST00000207054 Spock2Q9ER58 423 aa7.7□□□□□ -1.18
Smarca2-220ENSMUST00000207054 Supt5hO55201 1082 aaKnown RBP7.69□□□□□ -1.18
Smarca2-220ENSMUST00000207054 Rnf216P58283 853 aa7.69□□□□□ -1.18
Smarca2-220ENSMUST00000207054 Jarid2Q62315 1234 aa7.67□□□□□ -1.18
Smarca2-220ENSMUST00000207054 Slc4a2P13808 1237 aaKnown RBP7.67□□□□□ -1.18
Smarca2-220ENSMUST00000207054 Lrrc43Q3V0L5 667 aa7.66□□□□□ -1.18
Smarca2-220ENSMUST00000207054 Cypt1Q8CH20 168 aa7.66□□□□□ -1.18
Smarca2-220ENSMUST00000207054 NischQ80TM9 1593 aa7.64□□□□□ -1.19
Smarca2-220ENSMUST00000207054 Aplp2Q06335 707 aa7.64□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 72.7 ms