RNA–Protein interactions for RNA: ENSMUST00000200169.5

Chd8-212, Transcript of Chromodomain-helicase-DNA-binding protein 8, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Chd8, Length 8,509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8-212ENSMUST00000200169 Hsp90ab1P11499 724 aaKnown RBP11.34□□□□□ -0.59
Chd8-212ENSMUST00000200169 Casc1Q6TDU8 730 aa11.34□□□□□ -0.59
Chd8-212ENSMUST00000200169 Zfp777B9EKF4 885 aa11.31□□□□□ -0.6
Chd8-212ENSMUST00000200169 Csrnp3P59055 597 aa11.31□□□□□ -0.6
Chd8-212ENSMUST00000200169 Chmp4bQ9D8B3 224 aaKnown RBP11.31□□□□□ -0.6
Chd8-212ENSMUST00000200169 Wwc2Q6NXJ0 1187 aa11.29□□□□□ -0.6
Chd8-212ENSMUST00000200169 Lmod2Q3UHZ5 550 aa11.28□□□□□ -0.6
Chd8-212ENSMUST00000200169 Ppp4r2Q0VGB7 417 aa11.28□□□□□ -0.6
Chd8-212ENSMUST00000200169 Gm6268A2A3U9 297 aa11.27□□□□□ -0.61
Chd8-212ENSMUST00000200169 Tpm3-rs7D3Z2H9 248 aa11.27□□□□□ -0.61
Chd8-212ENSMUST00000200169 Ftsj3Q9DBE9 838 aaKnown RBP11.27□□□□□ -0.61
Chd8-212ENSMUST00000200169 P3h3Q8CG70 732 aa11.26□□□□□ -0.61
Chd8-212ENSMUST00000200169 Trim30dE9PWL0 497 aa11.25□□□□□ -0.61
Chd8-212ENSMUST00000200169 Zcchc6Q5BLK4 1491 aaKnown RBP11.24□□□□□ -0.61
Chd8-212ENSMUST00000200169 Anapc15P60007 132 aa11.24□□□□□ -0.61
Chd8-212ENSMUST00000200169 Plcb2A3KGF7 1181 aa11.23□□□□□ -0.61
Chd8-212ENSMUST00000200169 Clstn2Q9ER65 966 aa11.23□□□□□ -0.61
Chd8-212ENSMUST00000200169 Ccer2J3QPU5 274 aa11.23□□□□□ -0.61
Chd8-212ENSMUST00000200169 Map7O88735 730 aa11.23□□□□□ -0.61
Chd8-212ENSMUST00000200169 Sh3bp5Q9Z131 463 aa11.22□□□□□ -0.61
Chd8-212ENSMUST00000200169 Rad21Q61550 635 aaKnown RBP11.22□□□□□ -0.61
Chd8-212ENSMUST00000200169 Rtn4Q99P72 1162 aaKnown RBP11.22□□□□□ -0.61
Chd8-212ENSMUST00000200169 MccE9PWI3 1003 aa11.21□□□□□ -0.61
Chd8-212ENSMUST00000200169 Isy1Q69ZQ2 285 aaKnown RBP11.21□□□□□ -0.61
Chd8-212ENSMUST00000200169 Irx6Q9ER75 438 aa11.21□□□□□ -0.61
Chd8-212ENSMUST00000200169 Iqcf3Q9D498 203 aa11.2□□□□□ -0.62
Chd8-212ENSMUST00000200169 CanxP35564 591 aaKnown RBP11.2□□□□□ -0.62
Chd8-212ENSMUST00000200169 Wdr43Q6ZQL4 677 aaKnown RBP11.2□□□□□ -0.62
Chd8-212ENSMUST00000200169 Cald1E9QA15 768 aaKnown RBP11.19□□□□□ -0.62
Chd8-212ENSMUST00000200169 PtmsQ9D0J8 101 aaKnown RBP11.18□□□□□ -0.62
Chd8-212ENSMUST00000200169 Trim26Q99PN3 545 aa11.18□□□□□ -0.62
Chd8-212ENSMUST00000200169 Map7d2A2AG50 781 aa11.17□□□□□ -0.62
Chd8-212ENSMUST00000200169 Mier1Q5UAK0 511 aa11.17□□□□□ -0.62
Chd8-212ENSMUST00000200169 IqubQ8CDK3 788 aa11.16□□□□□ -0.62
Chd8-212ENSMUST00000200169 Pde3bQ61409 1100 aa11.16□□□□□ -0.62
Chd8-212ENSMUST00000200169 MsnP26041 577 aaKnown RBP11.14□□□□□ -0.63
Chd8-212ENSMUST00000200169 Arid4bA2CG63 1314 aaKnown RBP11.14□□□□□ -0.63
Chd8-212ENSMUST00000200169 Plekhg3Q4VAC9 1341 aa11.12□□□□□ -0.63
Chd8-212ENSMUST00000200169 RdxP26043 583 aaKnown RBP11.11□□□□□ -0.63
Chd8-212ENSMUST00000200169 Tpm4Q6IRU2 248 aa11.1□□□□□ -0.63
Chd8-212ENSMUST00000200169 Ppm1gQ61074 542 aa11.1□□□□□ -0.63
Chd8-212ENSMUST00000200169 Fkbp15Q6P9Q6 1216 aaKnown RBP11.09□□□□□ -0.63
Chd8-212ENSMUST00000200169 Mapk8ip3Q9ESN9 1337 aa11.09□□□□□ -0.63
Chd8-212ENSMUST00000200169 Tpm3P21107 285 aaKnown RBP11.09□□□□□ -0.63
Chd8-212ENSMUST00000200169 Rassf8Q8CJ96 419 aa11.09□□□□□ -0.63
Chd8-212ENSMUST00000200169 CalrP14211 416 aaKnown RBP11.09□□□□□ -0.63
Chd8-212ENSMUST00000200169 Exosc9Q9JHI7 438 aaKnown RBP11.09□□□□□ -0.63
Chd8-212ENSMUST00000200169 Nol10Q5RJG1 687 aaKnown RBP11.09□□□□□ -0.63
Chd8-212ENSMUST00000200169 R3hcc1Q8BSI6 488 aa11.08□□□□□ -0.64
Chd8-212ENSMUST00000200169 Hsp90b1P08113 802 aaKnown RBP11.08□□□□□ -0.64
Chd8-212ENSMUST00000200169 Dusp9Q7TNL7 452 aa11.08□□□□□ -0.64
Chd8-212ENSMUST00000200169 Vps53Q8CCB4 832 aa11.08□□□□□ -0.64
Chd8-212ENSMUST00000200169 Aplp2Q06335 707 aa11.07□□□□□ -0.64
Chd8-212ENSMUST00000200169 KnstrnQ9D9Z1 312 aaKnown RBP11.07□□□□□ -0.64
Chd8-212ENSMUST00000200169 Erich6bQ9D4S6 220 aa11.07□□□□□ -0.64
Chd8-212ENSMUST00000200169 Pcmtd1P59913 357 aa11.06□□□□□ -0.64
Chd8-212ENSMUST00000200169 Zrsr2Q62377 462 aaKnown RBP11.05□□□□□ -0.64
Chd8-212ENSMUST00000200169 AU015836B2RUM3 263 aa11.05□□□□□ -0.64
Chd8-212ENSMUST00000200169 NudcO35685 332 aaKnown RBP11.04□□□□□ -0.64
Chd8-212ENSMUST00000200169 Pdcl3Q8BVF2 240 aa11.04□□□□□ -0.64
Chd8-212ENSMUST00000200169 Odf2A3KGV1 830 aaKnown RBP11.03□□□□□ -0.64
Chd8-212ENSMUST00000200169 Tpm2P58774 284 aa11.03□□□□□ -0.64
Chd8-212ENSMUST00000200169 Mapk8ip2Q9ERE9 830 aa11.03□□□□□ -0.64
Chd8-212ENSMUST00000200169 Gm35339A0A140LHH9 1649 aa11.02□□□□□ -0.64
Chd8-212ENSMUST00000200169 Hap1O35668 628 aa11.02□□□□□ -0.64
Chd8-212ENSMUST00000200169 Paf1Q8K2T8 535 aa11.02□□□□□ -0.65
Chd8-212ENSMUST00000200169 Becn1O88597 448 aa11.02□□□□□ -0.65
Chd8-212ENSMUST00000200169 Ccdc27Q3V036 639 aa11.02□□□□□ -0.65
Chd8-212ENSMUST00000200169 Kri1Q8VDQ9 704 aaKnown RBP11□□□□□ -0.65
Chd8-212ENSMUST00000200169 HnrnpuQ8VEK3 800 aaKnown RBP10.99□□□□□ -0.65
Chd8-212ENSMUST00000200169 Iffo2Q8R2V2 512 aa10.99□□□□□ -0.65
Chd8-212ENSMUST00000200169 Tpm1P58771 284 aa10.99□□□□□ -0.65
Chd8-212ENSMUST00000200169 Ccdc47Q9D024 483 aaKnown RBP10.98□□□□□ -0.65
Chd8-212ENSMUST00000200169 Ggt6Q6PDE7 497 aa10.98□□□□□ -0.65
Chd8-212ENSMUST00000200169 Chaf1aQ9QWF0 911 aa10.97□□□□□ -0.65
Chd8-212ENSMUST00000200169 Mrs2Q5NCE8 434 aa10.97□□□□□ -0.65
Chd8-212ENSMUST00000200169 Tpd52l1O54818 204 aa10.96□□□□□ -0.65
Chd8-212ENSMUST00000200169 Sart3Q9JLI8 962 aaKnown RBP10.96□□□□□ -0.65
Chd8-212ENSMUST00000200169 Abcc9P70170 1546 aa10.96□□□□□ -0.65
Chd8-212ENSMUST00000200169 Anks4bQ8K3X6 423 aa10.96□□□□□ -0.65
Chd8-212ENSMUST00000200169 Smarce1O54941 411 aaKnown RBP10.96□□□□□ -0.66
Chd8-212ENSMUST00000200169 MyclP10166 368 aa10.96□□□□□ -0.66
Chd8-212ENSMUST00000200169 HdgfP51859 237 aaKnown RBP10.95□□□□□ -0.66
Chd8-212ENSMUST00000200169 Srpk2O54781 681 aaKnown RBP10.94□□□□□ -0.66
Chd8-212ENSMUST00000200169 Ccdc34Q3UI66 367 aa10.94□□□□□ -0.66
Chd8-212ENSMUST00000200169 Kiaa0754Q69ZZ9 979 aa10.93□□□□□ -0.66
Chd8-212ENSMUST00000200169 Rtf1A2AQ19 715 aaKnown RBP10.92□□□□□ -0.66
Chd8-212ENSMUST00000200169 Q8BT18 775 aa10.92□□□□□ -0.66
Chd8-212ENSMUST00000200169 Podxl2Q8CAE9 603 aa10.92□□□□□ -0.66
Chd8-212ENSMUST00000200169 NgefQ8CHT1 710 aa10.92□□□□□ -0.66
Chd8-212ENSMUST00000200169 Mbd3Q9Z2D8 285 aaKnown RBP10.91□□□□□ -0.66
Chd8-212ENSMUST00000200169 MecomP14404 1042 aa10.91□□□□□ -0.66
Chd8-212ENSMUST00000200169 Tomm22Q9CPQ3 142 aa10.91□□□□□ -0.66
Chd8-212ENSMUST00000200169 1700019A02RikA0A087WPV9 146 aa10.91□□□□□ -0.66
Chd8-212ENSMUST00000200169 Ddx11Q6AXC6 880 aa10.91□□□□□ -0.66
Chd8-212ENSMUST00000200169 Eid3Q3V124 375 aa10.9□□□□□ -0.66
Chd8-212ENSMUST00000200169 Dctn1O08788 1281 aa10.9□□□□□ -0.67
Chd8-212ENSMUST00000200169 Ipo7Q9EPL8 1038 aaKnown RBP10.89□□□□□ -0.67
Chd8-212ENSMUST00000200169 Clip1Q922J3 1391 aa10.89□□□□□ -0.67
Chd8-212ENSMUST00000200169 A0A1L1SQF0 893 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms