RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Aebp1Q640N1 1128 aa15.15■□□□□ 0.02
Msh3-202ENSMUST00000185852 Baz1bQ9Z277 1479 aa15.15■□□□□ 0.02
Msh3-202ENSMUST00000185852 ClspnQ80YR7 1315 aa15.15■□□□□ 0.02
Msh3-202ENSMUST00000185852 Rgl3Q3UYI5 709 aa15.14■□□□□ 0.01
Msh3-202ENSMUST00000185852 AknaQ80VW7 1404 aa15.12■□□□□ 0.01
Msh3-202ENSMUST00000185852 Gm38655A0A286YDK6 273 aa15.11■□□□□ 0.01
Msh3-202ENSMUST00000185852 Rpap1Q80TE0 1409 aa15.11■□□□□ 0.01
Msh3-202ENSMUST00000185852 Dhx29Q6PGC1 1365 aaKnown RBP15.09■□□□□ 0.01
Msh3-202ENSMUST00000185852 Grwd1Q810D6 446 aaKnown RBP15.09■□□□□ 0.01
Msh3-202ENSMUST00000185852 LrpprcQ6PB66 1392 aaKnown RBP15.09■□□□□ 0.01
Msh3-202ENSMUST00000185852 Cttnbp2B9EJA2 1648 aa15.09■□□□□ 0.01
Msh3-202ENSMUST00000185852 Hspa5P20029 655 aaKnown RBP15.06■□□□□ 0
Msh3-202ENSMUST00000185852 Rrp7aQ9D1C9 280 aaKnown RBP15.06■□□□□ 0
Msh3-202ENSMUST00000185852 Gm13695A2AK44 830 aa15.05■□□□□ -0
Msh3-202ENSMUST00000185852 Stra8P70278 393 aa15.04■□□□□ -0
Msh3-202ENSMUST00000185852 Kif27Q7M6Z4 1394 aa15.03■□□□□ -0
Msh3-202ENSMUST00000185852 Cabp1Q9JLK7 227 aa15□□□□□ -0.01
Msh3-202ENSMUST00000185852 Kdm2aP59997 1161 aa15□□□□□ -0.01
Msh3-202ENSMUST00000185852 Anp32bQ9EST5 272 aaKnown RBP15□□□□□ -0.01
Msh3-202ENSMUST00000185852 Frmpd1A2AKB4 1549 aa14.99□□□□□ -0.01
Msh3-202ENSMUST00000185852 P3h3Q8CG70 732 aa14.98□□□□□ -0.01
Msh3-202ENSMUST00000185852 Cc2d2aQ8CFW7 1633 aa14.98□□□□□ -0.01
Msh3-202ENSMUST00000185852 Rad54l2Q99NG0 1466 aa14.96□□□□□ -0.01
Msh3-202ENSMUST00000185852 Rangap1P46061 589 aaKnown RBP14.94□□□□□ -0.02
Msh3-202ENSMUST00000185852 PtprkP35822 1457 aa14.92□□□□□ -0.02
Msh3-202ENSMUST00000185852 Ccer2J3QPU5 274 aa14.92□□□□□ -0.02
Msh3-202ENSMUST00000185852 Sin3aQ60520 1274 aaKnown RBP14.91□□□□□ -0.02
Msh3-202ENSMUST00000185852 Ecm2Q5FW85 670 aa14.89□□□□□ -0.03
Msh3-202ENSMUST00000185852 Mtus2Q3UHD3 1353 aa14.88□□□□□ -0.03
Msh3-202ENSMUST00000185852 Stk24Q99KH8 431 aa14.88□□□□□ -0.03
Msh3-202ENSMUST00000185852 Safb2Q80YR5 991 aaKnown RBP14.88□□□□□ -0.03
Msh3-202ENSMUST00000185852 Csrnp3P59055 597 aa14.87□□□□□ -0.03
Msh3-202ENSMUST00000185852 Ppp1r18Q8BQ30 594 aa14.87□□□□□ -0.03
Msh3-202ENSMUST00000185852 Mrs2Q5NCE8 434 aa14.87□□□□□ -0.03
Msh3-202ENSMUST00000185852 Carmil1Q6EDY6 1374 aa14.86□□□□□ -0.03
Msh3-202ENSMUST00000185852 Trak1Q6PD31 939 aa14.85□□□□□ -0.03
Msh3-202ENSMUST00000185852 Rad21Q61550 635 aaKnown RBP14.85□□□□□ -0.03
Msh3-202ENSMUST00000185852 WrnO09053 1401 aa14.84□□□□□ -0.03
Msh3-202ENSMUST00000185852 Polr3glQ8R0C0 218 aa14.82□□□□□ -0.04
Msh3-202ENSMUST00000185852 Mroh3A0A1D5RM54 893 aa14.81□□□□□ -0.04
Msh3-202ENSMUST00000185852 Pkd2O35245 966 aa14.81□□□□□ -0.04
Msh3-202ENSMUST00000185852 Urb2E9Q7L1 1524 aaKnown RBP14.8□□□□□ -0.04
Msh3-202ENSMUST00000185852 Nlrp6Q91WS2 869 aa14.8□□□□□ -0.04
Msh3-202ENSMUST00000185852 Map4P27546 1125 aaKnown RBP14.79□□□□□ -0.04
Msh3-202ENSMUST00000185852 CenpbP27790 599 aa14.79□□□□□ -0.04
Msh3-202ENSMUST00000185852 Ccnb3Q810T2 1396 aa14.78□□□□□ -0.04
Msh3-202ENSMUST00000185852 Duox2A2AQ99 1517 aa14.78□□□□□ -0.04
Msh3-202ENSMUST00000185852 Clstn2Q9ER65 966 aa14.78□□□□□ -0.04
Msh3-202ENSMUST00000185852 MyclP10166 368 aa14.76□□□□□ -0.05
Msh3-202ENSMUST00000185852 CntlnA2AM05 1397 aa14.74□□□□□ -0.05
Msh3-202ENSMUST00000185852 Cnga1P29974 684 aa14.74□□□□□ -0.05
Msh3-202ENSMUST00000185852 Mphosph9A6H5Y1 991 aa14.73□□□□□ -0.05
Msh3-202ENSMUST00000185852 Sart1Q9Z315 806 aaKnown RBP14.73□□□□□ -0.05
Msh3-202ENSMUST00000185852 Arhgap35Q91YM2 1499 aa14.73□□□□□ -0.05
Msh3-202ENSMUST00000185852 Top2aQ01320 1528 aaKnown RBP14.72□□□□□ -0.05
Msh3-202ENSMUST00000185852 Zfp644E9QA22 1323 aa14.72□□□□□ -0.05
Msh3-202ENSMUST00000185852 Shroom4Q1W617 1475 aa14.72□□□□□ -0.05
Msh3-202ENSMUST00000185852 Card11Q8CIS0 1159 aa14.72□□□□□ -0.05
Msh3-202ENSMUST00000185852 Fyco1Q8VDC1 1437 aa14.71□□□□□ -0.06
Msh3-202ENSMUST00000185852 Wdr62Q3U3T8 1523 aa14.7□□□□□ -0.06
Msh3-202ENSMUST00000185852 Kif3bQ61771 747 aa14.69□□□□□ -0.06
Msh3-202ENSMUST00000185852 Efcab5A0JP43 1406 aa14.69□□□□□ -0.06
Msh3-202ENSMUST00000185852 Wwc2Q6NXJ0 1187 aa14.69□□□□□ -0.06
Msh3-202ENSMUST00000185852 Tdrd9Q14BI7 1383 aa14.69□□□□□ -0.06
Msh3-202ENSMUST00000185852 NeflP08551 543 aa14.68□□□□□ -0.06
Msh3-202ENSMUST00000185852 Jph4Q80WT0 628 aa14.68□□□□□ -0.06
Msh3-202ENSMUST00000185852 Plb1Q3TTY0 1478 aa14.67□□□□□ -0.06
Msh3-202ENSMUST00000185852 Gm20521D3Z5F7 333 aa14.67□□□□□ -0.06
Msh3-202ENSMUST00000185852 PogzQ8BZH4 1409 aaKnown RBP14.66□□□□□ -0.06
Msh3-202ENSMUST00000185852 NgefQ8CHT1 710 aa14.66□□□□□ -0.06
Msh3-202ENSMUST00000185852 Grin2bQ01097 1482 aa14.65□□□□□ -0.06
Msh3-202ENSMUST00000185852 Mrc2Q64449 1479 aa14.65□□□□□ -0.06
Msh3-202ENSMUST00000185852 Lemd3Q9WU40 921 aa14.65□□□□□ -0.06
Msh3-202ENSMUST00000185852 Ifit1bl1D3Z6F0 470 aa14.65□□□□□ -0.06
Msh3-202ENSMUST00000185852 Tnnt3Q9QZ47 272 aa14.65□□□□□ -0.06
Msh3-202ENSMUST00000185852 Stk26Q99JT2 416 aa14.64□□□□□ -0.07
Msh3-202ENSMUST00000185852 Mia2Q91ZV0 1396 aa14.64□□□□□ -0.07
Msh3-202ENSMUST00000185852 Srpk2O54781 681 aaKnown RBP14.63□□□□□ -0.07
Msh3-202ENSMUST00000185852 Trim26Q99PN3 545 aa14.63□□□□□ -0.07
Msh3-202ENSMUST00000185852 Arap1Q4LDD4 1452 aa14.62□□□□□ -0.07
Msh3-202ENSMUST00000185852 Soga1E1U8D0 1418 aa14.62□□□□□ -0.07
Msh3-202ENSMUST00000185852 Rundc1Q0VDN7 615 aa14.62□□□□□ -0.07
Msh3-202ENSMUST00000185852 Pabpn1Q8CCS6 302 aaKnown RBP14.62□□□□□ -0.07
Msh3-202ENSMUST00000185852 Top2bQ64511 1612 aa14.58□□□□□ -0.08
Msh3-202ENSMUST00000185852 Naip1Q9QWK5 1403 aa14.56□□□□□ -0.08
Msh3-202ENSMUST00000185852 ArxO35085 564 aa14.55□□□□□ -0.08
Msh3-202ENSMUST00000185852 Irx6Q9ER75 438 aa14.55□□□□□ -0.08
Msh3-202ENSMUST00000185852 Mroh2bQ7M6Y6 1581 aa14.54□□□□□ -0.08
Msh3-202ENSMUST00000185852 NrkQ9R0G8 1455 aa14.54□□□□□ -0.08
Msh3-202ENSMUST00000185852 Camsap1A2AHC3 1581 aa14.54□□□□□ -0.08
Msh3-202ENSMUST00000185852 Cc2d2bA0A286YDU8 1405 aa14.54□□□□□ -0.08
Msh3-202ENSMUST00000185852 Znf316Q6PGE4 1016 aa14.53□□□□□ -0.08
Msh3-202ENSMUST00000185852 Apbb1Q9QXJ1 710 aa14.53□□□□□ -0.08
Msh3-202ENSMUST00000185852 Stag3O70576 1240 aa14.53□□□□□ -0.08
Msh3-202ENSMUST00000185852 MlecQ6ZQI3 291 aaKnown RBP14.53□□□□□ -0.08
Msh3-202ENSMUST00000185852 Nup155Q99P88 1391 aaKnown RBP14.52□□□□□ -0.08
Msh3-202ENSMUST00000185852 Exosc9Q9JHI7 438 aaKnown RBP14.52□□□□□ -0.08
Msh3-202ENSMUST00000185852 Anks4bQ8K3X6 423 aa14.52□□□□□ -0.09
Msh3-202ENSMUST00000185852 Neurod2Q62414 383 aa14.51□□□□□ -0.09
Msh3-202ENSMUST00000185852 Arhgap31A6X8Z5 1425 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms