RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Rhox8Q6VSS7 320 aa20.2■□□□□ 0.82
Msh3-202ENSMUST00000185852 NischQ80TM9 1593 aa18.98■□□□□ 0.63
Msh3-202ENSMUST00000185852 Ccdc136Q3TVA9 1136 aa18.44■□□□□ 0.54
Msh3-202ENSMUST00000185852 Ehmt2Q9Z148 1263 aaKnown RBP18.09■□□□□ 0.49
Msh3-202ENSMUST00000185852 Abcc9P70170 1546 aa18■□□□□ 0.47
Msh3-202ENSMUST00000185852 Cngb1E1AZ71 1325 aa17.83■□□□□ 0.44
Msh3-202ENSMUST00000185852 Esf1Q3V1V3 845 aaKnown RBP17.81■□□□□ 0.44
Msh3-202ENSMUST00000185852 Gm35339A0A140LHH9 1649 aa17.78■□□□□ 0.44
Msh3-202ENSMUST00000185852 Gab3Q8BSM5 595 aa17.7■□□□□ 0.42
Msh3-202ENSMUST00000185852 Abcc8B2RUS7 1588 aa17.64■□□□□ 0.41
Msh3-202ENSMUST00000185852 Trim41Q5NCC3 630 aa17.51■□□□□ 0.39
Msh3-202ENSMUST00000185852 Zcchc6Q5BLK4 1491 aaKnown RBP17.31■□□□□ 0.36
Msh3-202ENSMUST00000185852 Myt1lP97500 1187 aa17.26■□□□□ 0.35
Msh3-202ENSMUST00000185852 Zeb1Q64318 1117 aa17.19■□□□□ 0.34
Msh3-202ENSMUST00000185852 Npm2Q80W85 207 aa17.16■□□□□ 0.34
Msh3-202ENSMUST00000185852 Il27Q8K3I6 234 aa17.15■□□□□ 0.34
Msh3-202ENSMUST00000185852 UbtfP25976 765 aaKnown RBP16.76■□□□□ 0.27
Msh3-202ENSMUST00000185852 Ube2uB1AUC4 352 aa16.73■□□□□ 0.27
Msh3-202ENSMUST00000185852 Ap3b1Q9Z1T1 1105 aa16.66■□□□□ 0.26
Msh3-202ENSMUST00000185852 HrcG5E8J6 738 aa16.64■□□□□ 0.25
Msh3-202ENSMUST00000185852 Rb1cc1Q9ESK9 1588 aa16.63■□□□□ 0.25
Msh3-202ENSMUST00000185852 Wdr66E9Q743 1299 aa16.58■□□□□ 0.24
Msh3-202ENSMUST00000185852 Ccdc180J3QNE4 1664 aa16.57■□□□□ 0.24
Msh3-202ENSMUST00000185852 Chic1Q8CBW7 227 aa16.56■□□□□ 0.24
Msh3-202ENSMUST00000185852 Rpgrip1Q9EPQ2 1331 aa16.48■□□□□ 0.23
Msh3-202ENSMUST00000185852 NacadQ5SWP3 1504 aa16.44■□□□□ 0.22
Msh3-202ENSMUST00000185852 Kdm5dQ62240 1548 aa16.42■□□□□ 0.22
Msh3-202ENSMUST00000185852 Dcaf1Q80TR8 1506 aa16.36■□□□□ 0.21
Msh3-202ENSMUST00000185852 Ppargc1bQ8VHJ7 1014 aa16.35■□□□□ 0.21
Msh3-202ENSMUST00000185852 Rtl1Q7M732 1744 aa16.32■□□□□ 0.2
Msh3-202ENSMUST00000185852 Npm1Q61937 292 aaKnown RBP16.32■□□□□ 0.2
Msh3-202ENSMUST00000185852 Acin1Q9JIX8 1338 aaKnown RBP16.32■□□□□ 0.2
Msh3-202ENSMUST00000185852 Las1lA2BE28 776 aaKnown RBP16.31■□□□□ 0.2
Msh3-202ENSMUST00000185852 Plekhg3Q4VAC9 1341 aa16.27■□□□□ 0.2
Msh3-202ENSMUST00000185852 Lmod2Q3UHZ5 550 aa16.27■□□□□ 0.19
Msh3-202ENSMUST00000185852 Fam50aQ9WV03 339 aaKnown RBP16.25■□□□□ 0.19
Msh3-202ENSMUST00000185852 Ubl4bQ9CQ84 188 aa16.22■□□□□ 0.19
Msh3-202ENSMUST00000185852 Brd4Q9ESU6 1400 aaKnown RBP16.22■□□□□ 0.19
Msh3-202ENSMUST00000185852 ScribQ80U72 1612 aa16.2■□□□□ 0.18
Msh3-202ENSMUST00000185852 Baz1aO88379 1555 aa16.19■□□□□ 0.18
Msh3-202ENSMUST00000185852 Ifnlr1Q8CGK5 535 aa16.13■□□□□ 0.17
Msh3-202ENSMUST00000185852 Zbtb7cQ8VCZ7 619 aa16.07■□□□□ 0.16
Msh3-202ENSMUST00000185852 Fkbp15Q6P9Q6 1216 aaKnown RBP16.06■□□□□ 0.16
Msh3-202ENSMUST00000185852 Mier1Q5UAK0 511 aa16.04■□□□□ 0.16
Msh3-202ENSMUST00000185852 Neurod1Q60867 357 aa16.04■□□□□ 0.16
Msh3-202ENSMUST00000185852 Eid3Q3V124 375 aa15.95■□□□□ 0.14
Msh3-202ENSMUST00000185852 NefmP08553 848 aa15.93■□□□□ 0.14
Msh3-202ENSMUST00000185852 Slc24a1Q91WD8 1130 aa15.93■□□□□ 0.14
Msh3-202ENSMUST00000185852 Cecr2E9Q2Z1 1453 aa15.92■□□□□ 0.14
Msh3-202ENSMUST00000185852 Cep164Q5DU05 1446 aa15.9■□□□□ 0.14
Msh3-202ENSMUST00000185852 Sycp2Q9CUU3 1500 aa15.89■□□□□ 0.13
Msh3-202ENSMUST00000185852 Rsf1E9PWW9 1441 aaKnown RBP15.88■□□□□ 0.13
Msh3-202ENSMUST00000185852 Kif15Q6P9L6 1387 aa15.87■□□□□ 0.13
Msh3-202ENSMUST00000185852 Clip1Q922J3 1391 aa15.81■□□□□ 0.12
Msh3-202ENSMUST00000185852 Supt5hO55201 1082 aaKnown RBP15.81■□□□□ 0.12
Msh3-202ENSMUST00000185852 Golga3P55937 1487 aa15.81■□□□□ 0.12
Msh3-202ENSMUST00000185852 Mapk8ip2Q9ERE9 830 aa15.79■□□□□ 0.12
Msh3-202ENSMUST00000185852 Ccdc88bQ4QRL3 1481 aa15.79■□□□□ 0.12
Msh3-202ENSMUST00000185852 Pcgf6Q99NA9 353 aa15.77■□□□□ 0.12
Msh3-202ENSMUST00000185852 NclP09405 707 aaKnown RBP15.75■□□□□ 0.11
Msh3-202ENSMUST00000185852 Zbtb4Q5F293 982 aa15.73■□□□□ 0.11
Msh3-202ENSMUST00000185852 Plppr3Q7TPB0 716 aa15.72■□□□□ 0.11
Msh3-202ENSMUST00000185852 Hnrnpul2Q00PI9 745 aaKnown RBP15.71■□□□□ 0.11
Msh3-202ENSMUST00000185852 Pelp1Q9DBD5 1123 aaKnown RBP15.71■□□□□ 0.1
Msh3-202ENSMUST00000185852 Chic2Q9D9G3 165 aa15.68■□□□□ 0.1
Msh3-202ENSMUST00000185852 TonslQ6NZL6 1363 aa15.63■□□□□ 0.09
Msh3-202ENSMUST00000185852 Ercc6F8VPZ5 1481 aa15.61■□□□□ 0.09
Msh3-202ENSMUST00000185852 CftrP26361 1476 aa15.58■□□□□ 0.08
Msh3-202ENSMUST00000185852 Pds5bQ4VA53 1446 aaKnown RBP15.55■□□□□ 0.08
Msh3-202ENSMUST00000185852 Setd5Q5XJV7 1441 aa15.55■□□□□ 0.08
Msh3-202ENSMUST00000185852 Os9Q8K2C7 672 aa15.55■□□□□ 0.08
Msh3-202ENSMUST00000185852 BlmO88700 1416 aa15.55■□□□□ 0.08
Msh3-202ENSMUST00000185852 Smarca2Q6DIC0 1577 aa15.52■□□□□ 0.07
Msh3-202ENSMUST00000185852 Synj1Q8CHC4 1574 aa15.51■□□□□ 0.07
Msh3-202ENSMUST00000185852 Erich6D3Z6S9 713 aa15.49■□□□□ 0.07
Msh3-202ENSMUST00000185852 Arhgap27A2AB59 869 aa15.47■□□□□ 0.07
Msh3-202ENSMUST00000185852 Prdm10Q3UTQ7 1184 aa15.46■□□□□ 0.07
Msh3-202ENSMUST00000185852 Sall2Q9QX96 1004 aa15.42■□□□□ 0.06
Msh3-202ENSMUST00000185852 Ccdc18Q640L5 1455 aa15.41■□□□□ 0.06
Msh3-202ENSMUST00000185852 Crybg2B7ZCC2 1516 aa15.4■□□□□ 0.06
Msh3-202ENSMUST00000185852 Nop58Q6DFW4 536 aaKnown RBP15.39■□□□□ 0.05
Msh3-202ENSMUST00000185852 Cdk11bP24788 784 aaKnown RBP15.38■□□□□ 0.05
Msh3-202ENSMUST00000185852 Cux2P70298 1426 aa15.38■□□□□ 0.05
Msh3-202ENSMUST00000185852 Atad2bE9Q166 1460 aaKnown RBP15.36■□□□□ 0.05
Msh3-202ENSMUST00000185852 Eif5bQ05D44 1216 aaKnown RBP15.35■□□□□ 0.05
Msh3-202ENSMUST00000185852 Dnajc5bQ9CQ94 199 aa15.32■□□□□ 0.04
Msh3-202ENSMUST00000185852 Ttbk1Q6PCN3 1308 aa15.31■□□□□ 0.04
Msh3-202ENSMUST00000185852 Gm13697A2AK42 830 aa15.3■□□□□ 0.04
Msh3-202ENSMUST00000185852 Smarca4Q3TKT4 1613 aaKnown RBP15.29■□□□□ 0.04
Msh3-202ENSMUST00000185852 Aebp2Q9Z248 504 aaKnown RBP15.29■□□□□ 0.04
Msh3-202ENSMUST00000185852 Cep162Q6ZQ06 1403 aa15.28■□□□□ 0.04
Msh3-202ENSMUST00000185852 Fmn1Q05860 1466 aa15.27■□□□□ 0.03
Msh3-202ENSMUST00000185852 Eea1Q8BL66 1411 aa15.26■□□□□ 0.03
Msh3-202ENSMUST00000185852 Atp1b4Q99ME6 356 aa15.26■□□□□ 0.03
Msh3-202ENSMUST00000185852 Rapgef2Q8CHG7 1496 aa15.24■□□□□ 0.03
Msh3-202ENSMUST00000185852 BicraF8VPZ9 1578 aa15.24■□□□□ 0.03
Msh3-202ENSMUST00000185852 Phldb1Q6PDH0 1371 aaKnown RBP15.24■□□□□ 0.03
Msh3-202ENSMUST00000185852 Iqgap2Q3UQ44 1575 aa15.21■□□□□ 0.02
Msh3-202ENSMUST00000185852 NrdcQ8BHG1 1161 aa15.2■□□□□ 0.02
Msh3-202ENSMUST00000185852 Arid3cA6PWV5 409 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms