RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 DekQ7TNV0 380 aaKnown RBP10.84□□□□□ -0.67
Rc3h1-202ENSMUST00000161609 Ciz1Q8VEH2 845 aa10.83□□□□□ -0.67
Rc3h1-202ENSMUST00000161609 Abcc9P70170 1546 aa10.83□□□□□ -0.68
Rc3h1-202ENSMUST00000161609 Bcl11bQ99PV8 884 aa10.83□□□□□ -0.68
Rc3h1-202ENSMUST00000161609 Ppp1r18Q8BQ30 594 aa10.82□□□□□ -0.68
Rc3h1-202ENSMUST00000161609 Taok2Q6ZQ29 1240 aa10.79□□□□□ -0.68
Rc3h1-202ENSMUST00000161609 Chic2Q9D9G3 165 aa10.79□□□□□ -0.68
Rc3h1-202ENSMUST00000161609 Kif7B7ZNG0 1348 aa10.78□□□□□ -0.68
Rc3h1-202ENSMUST00000161609 NefmP08553 848 aa10.78□□□□□ -0.68
Rc3h1-202ENSMUST00000161609 Klf15Q9EPW2 415 aa10.78□□□□□ -0.68
Rc3h1-202ENSMUST00000161609 Grwd1Q810D6 446 aaKnown RBP10.77□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Mical1Q8VDP3 1048 aa10.76□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Plagl1Q9JLQ4 704 aa10.76□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Sox12Q04890 314 aa10.75□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Plcb2A3KGF7 1181 aa10.75□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Spryd3E9Q9B3 442 aa10.74□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Arid3aQ62431 601 aa10.74□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Nop58Q6DFW4 536 aaKnown RBP10.72□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Apbb1Q9QXJ1 710 aa10.72□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Kdm2aP59997 1161 aa10.71□□□□□ -0.69
Rc3h1-202ENSMUST00000161609 Pip4k2bQ80XI4 416 aa10.7□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Upf2A2AT37 1269 aaKnown RBP10.7□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Tnnt1O88346 262 aa10.7□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Armcx1Q9CX83 456 aa10.69□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Paf1Q8K2T8 535 aa10.69□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 BccipQ9CWI3 316 aa10.68□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Rsph4aQ8BYM7 716 aa10.68□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Cnga1P29974 684 aa10.67□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Hs1bp3Q3TC93 395 aa10.67□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Fnbp4Q6ZQ03 1031 aa10.66□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Neurod2Q62414 383 aa10.66□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Vps53Q8CCB4 832 aa10.65□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Ccdc96Q9CR92 584 aa10.65□□□□□ -0.7
Rc3h1-202ENSMUST00000161609 Ubl4bQ9CQ84 188 aa10.64□□□□□ -0.71
Rc3h1-202ENSMUST00000161609 Znf428Q8C1M2 176 aa10.64□□□□□ -0.71
Rc3h1-202ENSMUST00000161609 Stk24Q99KH8 431 aa10.64□□□□□ -0.71
Rc3h1-202ENSMUST00000161609 Znf704Q9ERQ3 566 aa10.64□□□□□ -0.71
Rc3h1-202ENSMUST00000161609 TonslQ6NZL6 1363 aa10.63□□□□□ -0.71
Rc3h1-202ENSMUST00000161609 MycnP03966 462 aaKnown RBP10.62□□□□□ -0.71
Rc3h1-202ENSMUST00000161609 Sugp2Q8CH09 1067 aa10.61□□□□□ -0.71
Rc3h1-202ENSMUST00000161609 Gm6268A2A3U9 297 aa10.6□□□□□ -0.71
Rc3h1-202ENSMUST00000161609 Znf316Q6PGE4 1016 aa10.6□□□□□ -0.71
Rc3h1-202ENSMUST00000161609 Dbr1Q923B1 550 aa10.57□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Tomm22Q9CPQ3 142 aa10.57□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Hdgfl1Q2VPR5 283 aa10.56□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Skida1Q80YR3 822 aa10.56□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Pes1Q9EQ61 584 aaKnown RBP10.55□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 ArsiQ32KI9 573 aa10.55□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Sh3bp5Q9Z131 463 aa10.55□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Kcnn1Q9EQR3 537 aa10.54□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Zcchc6Q5BLK4 1491 aaKnown RBP10.54□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Ppp4r2Q0VGB7 417 aa10.54□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Fbln2P37889 1221 aa10.53□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Arid4aF8VPQ2 1261 aaKnown RBP10.53□□□□□ -0.72
Rc3h1-202ENSMUST00000161609 Stk26Q99JT2 416 aa10.52□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Cdca7Q9D0M2 382 aa10.52□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 IbspQ61711 324 aa10.52□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 PtmaP26350 111 aa10.51□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 PnnO35691 725 aaKnown RBP10.51□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Anapc15P60007 132 aa10.5□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Znf697Q569E7 569 aa10.5□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Arid3cA6PWV5 409 aa10.5□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Exosc9Q9JHI7 438 aaKnown RBP10.5□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Sytl4Q9R0Q1 673 aa10.49□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Ppm1gQ61074 542 aa10.49□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Rtl5Q5DTT4 599 aa10.47□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Ccar1Q8CH18 1146 aaKnown RBP10.47□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Pak3Q61036 559 aa10.46□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Tcerg1Q8CGF7 1100 aaKnown RBP10.46□□□□□ -0.73
Rc3h1-202ENSMUST00000161609 Rassf8Q8CJ96 419 aa10.46□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 Mier1Q5UAK0 511 aa10.45□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 U2surpQ6NV83 1029 aaKnown RBP10.44□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 Arhgap27A2AB59 869 aa10.44□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 Supt5hO55201 1082 aaKnown RBP10.44□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 Pibf1E9Q6K3 756 aa10.43□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 1700123L14RikQ3V2K7 440 aa10.42□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 Rgl3Q3UYI5 709 aa10.42□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 Rbm19Q8R3C6 952 aaKnown RBP10.41□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 TprnA2AI08 749 aaKnown RBP10.41□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 Cnksr2Q80YA9 1032 aa10.41□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 Stag3O70576 1240 aa10.4□□□□□ -0.74
Rc3h1-202ENSMUST00000161609 Wdr78E9PYY5 807 aa10.39□□□□□ -0.75
Rc3h1-202ENSMUST00000161609 Samd1D3YXK1 519 aa10.37□□□□□ -0.75
Rc3h1-202ENSMUST00000161609 Gm20521D3Z5F7 333 aa10.37□□□□□ -0.75
Rc3h1-202ENSMUST00000161609 IqubQ8CDK3 788 aa10.37□□□□□ -0.75
Rc3h1-202ENSMUST00000161609 Chmp3Q9CQ10 224 aa10.35□□□□□ -0.75
Rc3h1-202ENSMUST00000161609 Ca8P28651 291 aa10.34□□□□□ -0.75
Rc3h1-202ENSMUST00000161609 Psme1P97371 249 aa10.34□□□□□ -0.75
Rc3h1-202ENSMUST00000161609 Hsp90b1P08113 802 aaKnown RBP10.33□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Pcmtd1P59913 357 aa10.33□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Srpk2O54781 681 aaKnown RBP10.33□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Mak16Q8BGS0 296 aaKnown RBP10.31□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Tnnt3Q9QZ47 272 aa10.31□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Kdm4aQ8BW72 1064 aa10.31□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Znf219Q6IQX8 726 aa10.31□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Birc3O08863 600 aa10.3□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Rrp7aQ9D1C9 280 aaKnown RBP10.3□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Trim30dE9PWL0 497 aa10.3□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Sf3b2Q3UJB0 878 aaKnown RBP10.29□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Dmrt2Q8BG36 561 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms