RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Rhox8Q6VSS7 320 aa14.34□□□□□ -0.11
Rc3h1-202ENSMUST00000161609 Ehmt2Q9Z148 1263 aaKnown RBP13.5□□□□□ -0.25
Rc3h1-202ENSMUST00000161609 Ube2uB1AUC4 352 aa13.41□□□□□ -0.26
Rc3h1-202ENSMUST00000161609 Zeb1Q64318 1117 aa13.07□□□□□ -0.32
Rc3h1-202ENSMUST00000161609 Plppr3Q7TPB0 716 aa12.95□□□□□ -0.34
Rc3h1-202ENSMUST00000161609 Cngb1E1AZ71 1325 aa12.88□□□□□ -0.35
Rc3h1-202ENSMUST00000161609 Esf1Q3V1V3 845 aaKnown RBP12.86□□□□□ -0.35
Rc3h1-202ENSMUST00000161609 Wdr66E9Q743 1299 aa12.86□□□□□ -0.35
Rc3h1-202ENSMUST00000161609 Gab3Q8BSM5 595 aa12.73□□□□□ -0.37
Rc3h1-202ENSMUST00000161609 Slc24a1Q91WD8 1130 aa12.69□□□□□ -0.38
Rc3h1-202ENSMUST00000161609 Myt1lP97500 1187 aa12.68□□□□□ -0.38
Rc3h1-202ENSMUST00000161609 Amer1Q7TS75 1132 aa12.63□□□□□ -0.39
Rc3h1-202ENSMUST00000161609 Chic1Q8CBW7 227 aa12.61□□□□□ -0.39
Rc3h1-202ENSMUST00000161609 Ccdc136Q3TVA9 1136 aa12.6□□□□□ -0.39
Rc3h1-202ENSMUST00000161609 Npm2Q80W85 207 aa12.6□□□□□ -0.39
Rc3h1-202ENSMUST00000161609 Ifnlr1Q8CGK5 535 aa12.56□□□□□ -0.4
Rc3h1-202ENSMUST00000161609 Rpgrip1Q9EPQ2 1331 aa12.46□□□□□ -0.41
Rc3h1-202ENSMUST00000161609 Zbtb7cQ8VCZ7 619 aa12.43□□□□□ -0.42
Rc3h1-202ENSMUST00000161609 HrcG5E8J6 738 aa12.4□□□□□ -0.42
Rc3h1-202ENSMUST00000161609 Il27Q8K3I6 234 aa12.33□□□□□ -0.44
Rc3h1-202ENSMUST00000161609 Neurod1Q60867 357 aa12.3□□□□□ -0.44
Rc3h1-202ENSMUST00000161609 Os9Q8K2C7 672 aa12.3□□□□□ -0.44
Rc3h1-202ENSMUST00000161609 Ttbk1Q6PCN3 1308 aa12.29□□□□□ -0.44
Rc3h1-202ENSMUST00000161609 Las1lA2BE28 776 aaKnown RBP12.22□□□□□ -0.45
Rc3h1-202ENSMUST00000161609 Prdm10Q3UTQ7 1184 aa12.21□□□□□ -0.45
Rc3h1-202ENSMUST00000161609 Ap3b1Q9Z1T1 1105 aa12.19□□□□□ -0.46
Rc3h1-202ENSMUST00000161609 Gm13697A2AK42 830 aa12.18□□□□□ -0.46
Rc3h1-202ENSMUST00000161609 Zbtb4Q5F293 982 aa12.15□□□□□ -0.46
Rc3h1-202ENSMUST00000161609 Ppargc1bQ8VHJ7 1014 aa12.1□□□□□ -0.47
Rc3h1-202ENSMUST00000161609 Pelp1Q9DBD5 1123 aaKnown RBP12.07□□□□□ -0.48
Rc3h1-202ENSMUST00000161609 Atp1b4Q99ME6 356 aa12.03□□□□□ -0.48
Rc3h1-202ENSMUST00000161609 UbtfP25976 765 aaKnown RBP12.02□□□□□ -0.49
Rc3h1-202ENSMUST00000161609 Rangap1P46061 589 aaKnown RBP12.01□□□□□ -0.49
Rc3h1-202ENSMUST00000161609 Eif5bQ05D44 1216 aaKnown RBP11.98□□□□□ -0.49
Rc3h1-202ENSMUST00000161609 Hnrnpul2Q00PI9 745 aaKnown RBP11.86□□□□□ -0.51
Rc3h1-202ENSMUST00000161609 Gm13695A2AK44 830 aa11.85□□□□□ -0.51
Rc3h1-202ENSMUST00000161609 Fkbp15Q6P9Q6 1216 aaKnown RBP11.83□□□□□ -0.52
Rc3h1-202ENSMUST00000161609 Trim41Q5NCC3 630 aa11.83□□□□□ -0.52
Rc3h1-202ENSMUST00000161609 Erich6D3Z6S9 713 aa11.8□□□□□ -0.52
Rc3h1-202ENSMUST00000161609 DiexfQ8BTT6 772 aaKnown RBP11.78□□□□□ -0.52
Rc3h1-202ENSMUST00000161609 ArxO35085 564 aa11.78□□□□□ -0.52
Rc3h1-202ENSMUST00000161609 Fam50aQ9WV03 339 aaKnown RBP11.76□□□□□ -0.53
Rc3h1-202ENSMUST00000161609 4933416C03RikQ3V063 378 aa11.73□□□□□ -0.53
Rc3h1-202ENSMUST00000161609 Ubap1lG3UW59 384 aa11.72□□□□□ -0.53
Rc3h1-202ENSMUST00000161609 4930567H17RikQ3V0K5 233 aa11.72□□□□□ -0.53
Rc3h1-202ENSMUST00000161609 Irx6Q9ER75 438 aa11.72□□□□□ -0.53
Rc3h1-202ENSMUST00000161609 Polr3glQ8R0C0 218 aa11.71□□□□□ -0.53
Rc3h1-202ENSMUST00000161609 Ecm2Q5FW85 670 aa11.71□□□□□ -0.54
Rc3h1-202ENSMUST00000161609 Ythdc1E9Q5K9 736 aaKnown RBP11.67□□□□□ -0.54
Rc3h1-202ENSMUST00000161609 Lmod2Q3UHZ5 550 aa11.65□□□□□ -0.54
Rc3h1-202ENSMUST00000161609 Rtn4Q99P72 1162 aaKnown RBP11.56□□□□□ -0.56
Rc3h1-202ENSMUST00000161609 Vsig10D3YX43 558 aa11.56□□□□□ -0.56
Rc3h1-202ENSMUST00000161609 Safb2Q80YR5 991 aaKnown RBP11.56□□□□□ -0.56
Rc3h1-202ENSMUST00000161609 Clstn1Q9EPL2 979 aa11.54□□□□□ -0.56
Rc3h1-202ENSMUST00000161609 Cdk11bP24788 784 aaKnown RBP11.54□□□□□ -0.56
Rc3h1-202ENSMUST00000161609 MyclP10166 368 aa11.52□□□□□ -0.57
Rc3h1-202ENSMUST00000161609 Hdac5Q9Z2V6 1113 aa11.51□□□□□ -0.57
Rc3h1-202ENSMUST00000161609 P3h3Q8CG70 732 aa11.47□□□□□ -0.57
Rc3h1-202ENSMUST00000161609 Mapk8ip2Q9ERE9 830 aa11.44□□□□□ -0.58
Rc3h1-202ENSMUST00000161609 NclP09405 707 aaKnown RBP11.41□□□□□ -0.58
Rc3h1-202ENSMUST00000161609 NrdcQ8BHG1 1161 aa11.41□□□□□ -0.58
Rc3h1-202ENSMUST00000161609 Acin1Q9JIX8 1338 aaKnown RBP11.4□□□□□ -0.58
Rc3h1-202ENSMUST00000161609 Q8BT18 775 aa11.4□□□□□ -0.58
Rc3h1-202ENSMUST00000161609 Lmod3E9QA62 571 aa11.39□□□□□ -0.59
Rc3h1-202ENSMUST00000161609 Ppm1fQ8CGA0 452 aa11.37□□□□□ -0.59
Rc3h1-202ENSMUST00000161609 Slc4a1apE9PX68 744 aa11.37□□□□□ -0.59
Rc3h1-202ENSMUST00000161609 Ggt6Q6PDE7 497 aa11.36□□□□□ -0.59
Rc3h1-202ENSMUST00000161609 Prm3Q62100 101 aa11.35□□□□□ -0.59
Rc3h1-202ENSMUST00000161609 Csrnp3P59055 597 aa11.33□□□□□ -0.6
Rc3h1-202ENSMUST00000161609 NeflP08551 543 aa11.33□□□□□ -0.6
Rc3h1-202ENSMUST00000161609 Nlrp6Q91WS2 869 aa11.29□□□□□ -0.6
Rc3h1-202ENSMUST00000161609 NgefQ8CHT1 710 aa11.29□□□□□ -0.6
Rc3h1-202ENSMUST00000161609 Ripply1Q2WG77 201 aa11.27□□□□□ -0.61
Rc3h1-202ENSMUST00000161609 Anp32bQ9EST5 272 aaKnown RBP11.25□□□□□ -0.61
Rc3h1-202ENSMUST00000161609 Gm35339A0A140LHH9 1649 aa11.25□□□□□ -0.61
Rc3h1-202ENSMUST00000161609 CatipB9EKE5 520 aa11.24□□□□□ -0.61
Rc3h1-202ENSMUST00000161609 Trim26Q99PN3 545 aa11.22□□□□□ -0.61
Rc3h1-202ENSMUST00000161609 Stra8P70278 393 aa11.21□□□□□ -0.61
Rc3h1-202ENSMUST00000161609 Znf326O88291 580 aa11.2□□□□□ -0.62
Rc3h1-202ENSMUST00000161609 Myt1Q8CFC2 1127 aa11.17□□□□□ -0.62
Rc3h1-202ENSMUST00000161609 Chrna2Q91X60 512 aa11.14□□□□□ -0.63
Rc3h1-202ENSMUST00000161609 MlecQ6ZQI3 291 aaKnown RBP11.11□□□□□ -0.63
Rc3h1-202ENSMUST00000161609 CenpbP27790 599 aa11.09□□□□□ -0.63
Rc3h1-202ENSMUST00000161609 Arid4bA2CG63 1314 aaKnown RBP11.09□□□□□ -0.63
Rc3h1-202ENSMUST00000161609 Gm38655A0A286YDK6 273 aa11.04□□□□□ -0.64
Rc3h1-202ENSMUST00000161609 Npm1Q61937 292 aaKnown RBP11.03□□□□□ -0.64
Rc3h1-202ENSMUST00000161609 Rad21Q61550 635 aaKnown RBP11.03□□□□□ -0.64
Rc3h1-202ENSMUST00000161609 DaxxO35613 739 aa10.99□□□□□ -0.65
Rc3h1-202ENSMUST00000161609 Hsp90aa1P07901 733 aaKnown RBP10.98□□□□□ -0.65
Rc3h1-202ENSMUST00000161609 Plekhg3Q4VAC9 1341 aa10.98□□□□□ -0.65
Rc3h1-202ENSMUST00000161609 Ncbp3Q8BZR9 615 aaKnown RBP10.97□□□□□ -0.65
Rc3h1-202ENSMUST00000161609 Aplp2Q06335 707 aa10.97□□□□□ -0.65
Rc3h1-202ENSMUST00000161609 Senp3Q9EP97 568 aaKnown RBP10.93□□□□□ -0.66
Rc3h1-202ENSMUST00000161609 Isy1Q69ZQ2 285 aaKnown RBP10.91□□□□□ -0.66
Rc3h1-202ENSMUST00000161609 Plin1Q8CGN5 517 aa10.9□□□□□ -0.66
Rc3h1-202ENSMUST00000161609 AcrbpQ3V140 540 aa10.89□□□□□ -0.67
Rc3h1-202ENSMUST00000161609 Fgd1P52734 960 aa10.89□□□□□ -0.67
Rc3h1-202ENSMUST00000161609 1700019A02RikA0A087WPV9 146 aa10.86□□□□□ -0.67
Rc3h1-202ENSMUST00000161609 Noc3lQ8VI84 807 aaKnown RBP10.84□□□□□ -0.67
Rc3h1-202ENSMUST00000161609 Eid3Q3V124 375 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms