RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Csrnp3P59055 597 aa18.89■□□□□ 0.62
Stag1-206ENSMUST00000129269 ClspnQ80YR7 1315 aa18.89■□□□□ 0.61
Stag1-206ENSMUST00000129269 Rrp7aQ9D1C9 280 aaKnown RBP18.88■□□□□ 0.61
Stag1-206ENSMUST00000129269 Dcaf1Q80TR8 1506 aa18.88■□□□□ 0.61
Stag1-206ENSMUST00000129269 Ggt6Q6PDE7 497 aa18.87■□□□□ 0.61
Stag1-206ENSMUST00000129269 Stk24Q99KH8 431 aa18.85■□□□□ 0.61
Stag1-206ENSMUST00000129269 Ccer2J3QPU5 274 aa18.84■□□□□ 0.61
Stag1-206ENSMUST00000129269 Trim26Q99PN3 545 aa18.84■□□□□ 0.61
Stag1-206ENSMUST00000129269 4930567H17RikQ3V0K5 233 aa18.84■□□□□ 0.61
Stag1-206ENSMUST00000129269 IqubQ8CDK3 788 aa18.83■□□□□ 0.6
Stag1-206ENSMUST00000129269 Sall2Q9QX96 1004 aa18.81■□□□□ 0.6
Stag1-206ENSMUST00000129269 AknaQ80VW7 1404 aa18.79■□□□□ 0.6
Stag1-206ENSMUST00000129269 Srpk2O54781 681 aaKnown RBP18.79■□□□□ 0.6
Stag1-206ENSMUST00000129269 Grwd1Q810D6 446 aaKnown RBP18.78■□□□□ 0.6
Stag1-206ENSMUST00000129269 Rtn4Q99P72 1162 aaKnown RBP18.76■□□□□ 0.59
Stag1-206ENSMUST00000129269 Exosc9Q9JHI7 438 aaKnown RBP18.76■□□□□ 0.59
Stag1-206ENSMUST00000129269 Mroh3A0A1D5RM54 893 aa18.76■□□□□ 0.59
Stag1-206ENSMUST00000129269 Gm38655A0A286YDK6 273 aa18.75■□□□□ 0.59
Stag1-206ENSMUST00000129269 Fgd1P52734 960 aa18.73■□□□□ 0.59
Stag1-206ENSMUST00000129269 Gm20521D3Z5F7 333 aa18.73■□□□□ 0.59
Stag1-206ENSMUST00000129269 Arid4bA2CG63 1314 aaKnown RBP18.68■□□□□ 0.58
Stag1-206ENSMUST00000129269 Rtl5Q5DTT4 599 aa18.67■□□□□ 0.58
Stag1-206ENSMUST00000129269 Anks4bQ8K3X6 423 aa18.66■□□□□ 0.58
Stag1-206ENSMUST00000129269 Aplp2Q06335 707 aa18.65■□□□□ 0.58
Stag1-206ENSMUST00000129269 Stag3O70576 1240 aa18.64■□□□□ 0.58
Stag1-206ENSMUST00000129269 Ythdc1E9Q5K9 736 aaKnown RBP18.63■□□□□ 0.57
Stag1-206ENSMUST00000129269 Anp32aO35381 247 aa18.62■□□□□ 0.57
Stag1-206ENSMUST00000129269 Pds5bQ4VA53 1446 aaKnown RBP18.61■□□□□ 0.57
Stag1-206ENSMUST00000129269 Baz1aO88379 1555 aa18.6■□□□□ 0.57
Stag1-206ENSMUST00000129269 Kdm5dQ62240 1548 aa18.58■□□□□ 0.57
Stag1-206ENSMUST00000129269 Golga3P55937 1487 aa18.58■□□□□ 0.56
Stag1-206ENSMUST00000129269 Cnga1P29974 684 aa18.58■□□□□ 0.56
Stag1-206ENSMUST00000129269 Mtus2Q3UHD3 1353 aa18.58■□□□□ 0.56
Stag1-206ENSMUST00000129269 Mrs2Q5NCE8 434 aa18.57■□□□□ 0.56
Stag1-206ENSMUST00000129269 Q8BT18 775 aa18.57■□□□□ 0.56
Stag1-206ENSMUST00000129269 Ecm2Q5FW85 670 aa18.53■□□□□ 0.56
Stag1-206ENSMUST00000129269 Znf326O88291 580 aa18.52■□□□□ 0.56
Stag1-206ENSMUST00000129269 Ubap1lG3UW59 384 aa18.52■□□□□ 0.55
Stag1-206ENSMUST00000129269 Stk26Q99JT2 416 aa18.51■□□□□ 0.55
Stag1-206ENSMUST00000129269 1700019A02RikA0A087WPV9 146 aa18.49■□□□□ 0.55
Stag1-206ENSMUST00000129269 Sox12Q04890 314 aa18.48■□□□□ 0.55
Stag1-206ENSMUST00000129269 Eea1Q8BL66 1411 aa18.48■□□□□ 0.55
Stag1-206ENSMUST00000129269 DaxxO35613 739 aa18.48■□□□□ 0.55
Stag1-206ENSMUST00000129269 Clstn1Q9EPL2 979 aa18.47■□□□□ 0.55
Stag1-206ENSMUST00000129269 Psme1P97371 249 aa18.46■□□□□ 0.55
Stag1-206ENSMUST00000129269 Card11Q8CIS0 1159 aa18.46■□□□□ 0.55
Stag1-206ENSMUST00000129269 Txndc2Q6P902 515 aa18.46■□□□□ 0.55
Stag1-206ENSMUST00000129269 Lemd3Q9WU40 921 aa18.45■□□□□ 0.54
Stag1-206ENSMUST00000129269 Rpap1Q80TE0 1409 aa18.45■□□□□ 0.54
Stag1-206ENSMUST00000129269 Kif27Q7M6Z4 1394 aa18.41■□□□□ 0.54
Stag1-206ENSMUST00000129269 Plin1Q8CGN5 517 aa18.4■□□□□ 0.54
Stag1-206ENSMUST00000129269 Neurod2Q62414 383 aa18.4■□□□□ 0.54
Stag1-206ENSMUST00000129269 Mapk8ip3Q9ESN9 1337 aa18.39■□□□□ 0.53
Stag1-206ENSMUST00000129269 Hsp90aa1P07901 733 aaKnown RBP18.38■□□□□ 0.53
Stag1-206ENSMUST00000129269 Pabpn1Q8CCS6 302 aaKnown RBP18.37■□□□□ 0.53
Stag1-206ENSMUST00000129269 Gm6268A2A3U9 297 aa18.37■□□□□ 0.53
Stag1-206ENSMUST00000129269 Apbb1Q9QXJ1 710 aa18.36■□□□□ 0.53
Stag1-206ENSMUST00000129269 Znf316Q6PGE4 1016 aa18.35■□□□□ 0.53
Stag1-206ENSMUST00000129269 Cux2P70298 1426 aa18.35■□□□□ 0.53
Stag1-206ENSMUST00000129269 Map4P27546 1125 aaKnown RBP18.33■□□□□ 0.53
Stag1-206ENSMUST00000129269 Ppm1fQ8CGA0 452 aa18.33■□□□□ 0.52
Stag1-206ENSMUST00000129269 Upf2A2AT37 1269 aaKnown RBP18.32■□□□□ 0.52
Stag1-206ENSMUST00000129269 Vsig10D3YX43 558 aa18.32■□□□□ 0.52
Stag1-206ENSMUST00000129269 Bcl11bQ99PV8 884 aa18.3■□□□□ 0.52
Stag1-206ENSMUST00000129269 Kif3bQ61771 747 aa18.27■□□□□ 0.52
Stag1-206ENSMUST00000129269 Iqcf3Q9D498 203 aa18.27■□□□□ 0.51
Stag1-206ENSMUST00000129269 Calr4Q3TQS0 420 aa18.25■□□□□ 0.51
Stag1-206ENSMUST00000129269 Aebp1Q640N1 1128 aa18.25■□□□□ 0.51
Stag1-206ENSMUST00000129269 Ppp4r2Q0VGB7 417 aa18.25■□□□□ 0.51
Stag1-206ENSMUST00000129269 Ifit1bl1D3Z6F0 470 aa18.22■□□□□ 0.51
Stag1-206ENSMUST00000129269 Pip4k2bQ80XI4 416 aa18.22■□□□□ 0.51
Stag1-206ENSMUST00000129269 Aebp2Q9Z248 504 aaKnown RBP18.21■□□□□ 0.51
Stag1-206ENSMUST00000129269 HdgfP51859 237 aaKnown RBP18.21■□□□□ 0.51
Stag1-206ENSMUST00000129269 Phldb1Q6PDH0 1371 aaKnown RBP18.2■□□□□ 0.5
Stag1-206ENSMUST00000129269 1700123L14RikQ3V2K7 440 aa18.2■□□□□ 0.5
Stag1-206ENSMUST00000129269 Baz1bQ9Z277 1479 aa18.2■□□□□ 0.5
Stag1-206ENSMUST00000129269 Birc3O08863 600 aa18.19■□□□□ 0.5
Stag1-206ENSMUST00000129269 DekQ7TNV0 380 aaKnown RBP18.19■□□□□ 0.5
Stag1-206ENSMUST00000129269 Tnnt1O88346 262 aa18.17■□□□□ 0.5
Stag1-206ENSMUST00000129269 Trak1Q6PD31 939 aa18.16■□□□□ 0.5
Stag1-206ENSMUST00000129269 U2surpQ6NV83 1029 aaKnown RBP18.15■□□□□ 0.5
Stag1-206ENSMUST00000129269 Rtf1A2AQ19 715 aaKnown RBP18.15■□□□□ 0.5
Stag1-206ENSMUST00000129269 Ofd1Q80Z25 1017 aa18.14■□□□□ 0.49
Stag1-206ENSMUST00000129269 Gtf2e1Q9D0D5 440 aa18.13■□□□□ 0.49
Stag1-206ENSMUST00000129269 Senp3Q9EP97 568 aaKnown RBP18.13■□□□□ 0.49
Stag1-206ENSMUST00000129269 Ciz1Q8VEH2 845 aa18.13■□□□□ 0.49
Stag1-206ENSMUST00000129269 Cabp1Q9JLK7 227 aa18.13■□□□□ 0.49
Stag1-206ENSMUST00000129269 Pak3Q61036 559 aa18.12■□□□□ 0.49
Stag1-206ENSMUST00000129269 Armcx1Q9CX83 456 aa18.12■□□□□ 0.49
Stag1-206ENSMUST00000129269 Cwc22Q8C5N3 908 aaKnown RBP18.1■□□□□ 0.49
Stag1-206ENSMUST00000129269 Zfp777B9EKF4 885 aa18.1■□□□□ 0.49
Stag1-206ENSMUST00000129269 Pkd2O35245 966 aa18.09■□□□□ 0.49
Stag1-206ENSMUST00000129269 Trim30dE9PWL0 497 aa18.09■□□□□ 0.49
Stag1-206ENSMUST00000129269 Hspa5P20029 655 aaKnown RBP18.08■□□□□ 0.48
Stag1-206ENSMUST00000129269 Eif4g2Q62448 906 aaKnown RBP18.07■□□□□ 0.48
Stag1-206ENSMUST00000129269 Chrna2Q91X60 512 aa18.07■□□□□ 0.48
Stag1-206ENSMUST00000129269 Sycp2Q9CUU3 1500 aa18.07■□□□□ 0.48
Stag1-206ENSMUST00000129269 Pes1Q9EQ61 584 aaKnown RBP18.06■□□□□ 0.48
Stag1-206ENSMUST00000129269 Sart1Q9Z315 806 aaKnown RBP18.05■□□□□ 0.48
Stag1-206ENSMUST00000129269 Wdr43Q6ZQL4 677 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms