RNA–Protein interactions for RNA: ENSMUST00000117160.1

Cdh13-201, Transcript of Cadherin-13, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdh13, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh13-201ENSMUST00000117160 Cttnbp2B9EJA2 1648 aa12.37□□□□□ -0.43
Cdh13-201ENSMUST00000117160 Ap3b1Q9Z1T1 1105 aa12.35□□□□□ -0.43
Cdh13-201ENSMUST00000117160 Fam135aQ6NS59 1506 aa12.34□□□□□ -0.43
Cdh13-201ENSMUST00000117160 Dhx29Q6PGC1 1365 aaKnown RBP12.34□□□□□ -0.43
Cdh13-201ENSMUST00000117160 Hnrnpul2Q00PI9 745 aaKnown RBP12.33□□□□□ -0.44
Cdh13-201ENSMUST00000117160 Golga3P55937 1487 aa12.33□□□□□ -0.44
Cdh13-201ENSMUST00000117160 Ccdc27Q3V036 639 aa12.31□□□□□ -0.44
Cdh13-201ENSMUST00000117160 Ipo4Q8VI75 1082 aa12.31□□□□□ -0.44
Cdh13-201ENSMUST00000117160 Mier1Q5UAK0 511 aa12.31□□□□□ -0.44
Cdh13-201ENSMUST00000117160 Znf316Q6PGE4 1016 aa12.29□□□□□ -0.44
Cdh13-201ENSMUST00000117160 Urb2E9Q7L1 1524 aaKnown RBP12.28□□□□□ -0.44
Cdh13-201ENSMUST00000117160 Arhgap27A2AB59 869 aa12.27□□□□□ -0.45
Cdh13-201ENSMUST00000117160 Aebp2Q9Z248 504 aaKnown RBP12.27□□□□□ -0.45
Cdh13-201ENSMUST00000117160 LrpprcQ6PB66 1392 aaKnown RBP12.26□□□□□ -0.45
Cdh13-201ENSMUST00000117160 AknaQ80VW7 1404 aa12.23□□□□□ -0.45
Cdh13-201ENSMUST00000117160 Hsp90aa1P07901 733 aaKnown RBP12.21□□□□□ -0.45
Cdh13-201ENSMUST00000117160 Ppargc1bQ8VHJ7 1014 aa12.2□□□□□ -0.46
Cdh13-201ENSMUST00000117160 Ppp1r18Q8BQ30 594 aa12.19□□□□□ -0.46
Cdh13-201ENSMUST00000117160 Stra8P70278 393 aa12.18□□□□□ -0.46
Cdh13-201ENSMUST00000117160 Plb1Q3TTY0 1478 aa12.18□□□□□ -0.46
Cdh13-201ENSMUST00000117160 4933416C03RikQ3V063 378 aa12.18□□□□□ -0.46
Cdh13-201ENSMUST00000117160 NeflP08551 543 aa12.17□□□□□ -0.46
Cdh13-201ENSMUST00000117160 Supt16hQ920B9 1047 aa12.17□□□□□ -0.46
Cdh13-201ENSMUST00000117160 Zfp777B9EKF4 885 aa12.16□□□□□ -0.46
Cdh13-201ENSMUST00000117160 Dnajc5P60904 198 aa12.15□□□□□ -0.46
Cdh13-201ENSMUST00000117160 Arid3cA6PWV5 409 aa12.14□□□□□ -0.47
Cdh13-201ENSMUST00000117160 Eif5bQ05D44 1216 aaKnown RBP12.14□□□□□ -0.47
Cdh13-201ENSMUST00000117160 TimelessQ9R1X4 1197 aa12.13□□□□□ -0.47
Cdh13-201ENSMUST00000117160 Lmod2Q3UHZ5 550 aa12.13□□□□□ -0.47
Cdh13-201ENSMUST00000117160 Nolc1E9Q5C9 702 aaKnown RBP12.12□□□□□ -0.47
Cdh13-201ENSMUST00000117160 Ccdc88bQ4QRL3 1481 aa12.1□□□□□ -0.47
Cdh13-201ENSMUST00000117160 Anp32bQ9EST5 272 aaKnown RBP12.08□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Fmn1Q05860 1466 aa12.08□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Calr4Q3TQS0 420 aa12.07□□□□□ -0.48
Cdh13-201ENSMUST00000117160 AampJ3QN89 436 aa12.07□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Rad54l2Q99NG0 1466 aa12.05□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Rtn4Q99P72 1162 aaKnown RBP12.05□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Pdcl3Q8BVF2 240 aa12.04□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Taok2Q6ZQ29 1240 aa12.03□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Ube2uB1AUC4 352 aa12.03□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Duox2A2AQ99 1517 aa12.02□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Kif21aQ9QXL2 1672 aa12.02□□□□□ -0.48
Cdh13-201ENSMUST00000117160 Scaf1Q5U4C3 1256 aaKnown RBP12.02□□□□□ -0.49
Cdh13-201ENSMUST00000117160 Dnttip2Q8R2M2 758 aaKnown RBP12.01□□□□□ -0.49
Cdh13-201ENSMUST00000117160 Zbtb7cQ8VCZ7 619 aa12□□□□□ -0.49
Cdh13-201ENSMUST00000117160 Baz1bQ9Z277 1479 aa11.99□□□□□ -0.49
Cdh13-201ENSMUST00000117160 PogzQ8BZH4 1409 aaKnown RBP11.99□□□□□ -0.49
Cdh13-201ENSMUST00000117160 Lrriq1Q0P5X1 1673 aa11.98□□□□□ -0.49
Cdh13-201ENSMUST00000117160 Ythdc1E9Q5K9 736 aaKnown RBP11.98□□□□□ -0.49
Cdh13-201ENSMUST00000117160 DaxxO35613 739 aa11.97□□□□□ -0.49
Cdh13-201ENSMUST00000117160 TonslQ6NZL6 1363 aa11.97□□□□□ -0.49
Cdh13-201ENSMUST00000117160 Ppp4r2Q0VGB7 417 aa11.97□□□□□ -0.49
Cdh13-201ENSMUST00000117160 Lamc3Q9R0B6 1581 aa11.96□□□□□ -0.49
Cdh13-201ENSMUST00000117160 Wdr43Q6ZQL4 677 aaKnown RBP11.96□□□□□ -0.49
Cdh13-201ENSMUST00000117160 Unc13aQ4KUS2 1712 aa11.96□□□□□ -0.5
Cdh13-201ENSMUST00000117160 Crocc2F6XLV1 1638 aa11.95□□□□□ -0.5
Cdh13-201ENSMUST00000117160 MlecQ6ZQI3 291 aaKnown RBP11.95□□□□□ -0.5
Cdh13-201ENSMUST00000117160 Rpap1Q80TE0 1409 aa11.95□□□□□ -0.5
Cdh13-201ENSMUST00000117160 DmtnQ9WV69 405 aa11.94□□□□□ -0.5
Cdh13-201ENSMUST00000117160 Soga1E1U8D0 1418 aa11.93□□□□□ -0.5
Cdh13-201ENSMUST00000117160 Gtf2a1Q99PM3 378 aa11.93□□□□□ -0.5
Cdh13-201ENSMUST00000117160 Ift140E9PY46 1464 aa11.92□□□□□ -0.5
Cdh13-201ENSMUST00000117160 Rbm10Q99KG3 930 aaKnown RBP11.91□□□□□ -0.5
Cdh13-201ENSMUST00000117160 Camsap1A2AHC3 1581 aa11.9□□□□□ -0.5
Cdh13-201ENSMUST00000117160 Fgd6Q69ZL1 1399 aa11.89□□□□□ -0.51
Cdh13-201ENSMUST00000117160 Plekhg3Q4VAC9 1341 aa11.88□□□□□ -0.51
Cdh13-201ENSMUST00000117160 Rrp9Q91WM3 475 aaKnown RBP11.88□□□□□ -0.51
Cdh13-201ENSMUST00000117160 Gm156Q58A37 223 aa11.88□□□□□ -0.51
Cdh13-201ENSMUST00000117160 Efcab5A0JP43 1406 aa11.87□□□□□ -0.51
Cdh13-201ENSMUST00000117160 Grin2bQ01097 1482 aa11.86□□□□□ -0.51
Cdh13-201ENSMUST00000117160 Kcnn1Q9EQR3 537 aa11.86□□□□□ -0.51
Cdh13-201ENSMUST00000117160 MyclP10166 368 aa11.86□□□□□ -0.51
Cdh13-201ENSMUST00000117160 Safb2Q80YR5 991 aaKnown RBP11.86□□□□□ -0.51
Cdh13-201ENSMUST00000117160 AU015836B2RUM3 263 aa11.85□□□□□ -0.51
Cdh13-201ENSMUST00000117160 Ipo9Q91YE6 1041 aa11.85□□□□□ -0.51
Cdh13-201ENSMUST00000117160 UbtfP25976 765 aaKnown RBP11.84□□□□□ -0.51
Cdh13-201ENSMUST00000117160 NgefQ8CHT1 710 aa11.83□□□□□ -0.51
Cdh13-201ENSMUST00000117160 Cc2d2bA0A286YDU8 1405 aa11.83□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Znf710Q3U288 666 aa11.83□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Gm13697A2AK42 830 aa11.82□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Clip1Q922J3 1391 aa11.82□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Jph4Q80WT0 628 aa11.81□□□□□ -0.52
Cdh13-201ENSMUST00000117160 PtprkP35822 1457 aa11.81□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Vgll3P85442 326 aa11.81□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Pcdh10E9PXQ7 1057 aa11.79□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Disp1Q3TDN0 1521 aa11.79□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Fam50aQ9WV03 339 aaKnown RBP11.78□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Setd5Q5XJV7 1441 aa11.77□□□□□ -0.52
Cdh13-201ENSMUST00000117160 Pak3Q61036 559 aa11.77□□□□□ -0.53
Cdh13-201ENSMUST00000117160 Top2bQ64511 1612 aa11.77□□□□□ -0.53
Cdh13-201ENSMUST00000117160 WrnO09053 1401 aa11.77□□□□□ -0.53
Cdh13-201ENSMUST00000117160 Armcx1Q9CX83 456 aa11.77□□□□□ -0.53
Cdh13-201ENSMUST00000117160 Ccer2J3QPU5 274 aa11.76□□□□□ -0.53
Cdh13-201ENSMUST00000117160 Grin2aP35436 1464 aa11.75□□□□□ -0.53
Cdh13-201ENSMUST00000117160 Neo1P97798 1493 aa11.74□□□□□ -0.53
Cdh13-201ENSMUST00000117160 Ythdc2B2RR83 1445 aaKnown RBP11.73□□□□□ -0.53
Cdh13-201ENSMUST00000117160 CadpsQ80TJ1 1355 aa11.73□□□□□ -0.53
Cdh13-201ENSMUST00000117160 Znf692Q3U381 531 aa11.72□□□□□ -0.53
Cdh13-201ENSMUST00000117160 Shroom4Q1W617 1475 aa11.72□□□□□ -0.53
Cdh13-201ENSMUST00000117160 Rapgef2Q8CHG7 1496 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms