RNA–Protein interactions for RNA: ENSMUST00000117160.1

Cdh13-201, Transcript of Cadherin-13, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdh13, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh13-201ENSMUST00000117160 NischQ80TM9 1593 aa15.43■□□□□ 0.06
Cdh13-201ENSMUST00000117160 Rpgrip1Q9EPQ2 1331 aa15.18■□□□□ 0.02
Cdh13-201ENSMUST00000117160 Abcc9P70170 1546 aa15.11■□□□□ 0.01
Cdh13-201ENSMUST00000117160 Rhox8Q6VSS7 320 aa14.93□□□□□ -0.02
Cdh13-201ENSMUST00000117160 Gm35339A0A140LHH9 1649 aa14.71□□□□□ -0.05
Cdh13-201ENSMUST00000117160 Abcc8B2RUS7 1588 aa14.65□□□□□ -0.06
Cdh13-201ENSMUST00000117160 Pcgf6Q99NA9 353 aa14.46□□□□□ -0.09
Cdh13-201ENSMUST00000117160 Myt1Q8CFC2 1127 aa14.45□□□□□ -0.1
Cdh13-201ENSMUST00000117160 Las1lA2BE28 776 aaKnown RBP14.38□□□□□ -0.11
Cdh13-201ENSMUST00000117160 DiexfQ8BTT6 772 aaKnown RBP14.31□□□□□ -0.12
Cdh13-201ENSMUST00000117160 CenpbP27790 599 aa14.24□□□□□ -0.13
Cdh13-201ENSMUST00000117160 Acin1Q9JIX8 1338 aaKnown RBP14.16□□□□□ -0.14
Cdh13-201ENSMUST00000117160 ScribQ80U72 1612 aa13.92□□□□□ -0.18
Cdh13-201ENSMUST00000117160 Amer1Q7TS75 1132 aa13.87□□□□□ -0.19
Cdh13-201ENSMUST00000117160 NacadQ5SWP3 1504 aa13.83□□□□□ -0.2
Cdh13-201ENSMUST00000117160 Neurod1Q60867 357 aa13.81□□□□□ -0.2
Cdh13-201ENSMUST00000117160 Ccdc136Q3TVA9 1136 aa13.8□□□□□ -0.2
Cdh13-201ENSMUST00000117160 Bcl11aQ9QYE3 773 aa13.8□□□□□ -0.2
Cdh13-201ENSMUST00000117160 Kdm5dQ62240 1548 aa13.76□□□□□ -0.21
Cdh13-201ENSMUST00000117160 Zcchc6Q5BLK4 1491 aaKnown RBP13.7□□□□□ -0.22
Cdh13-201ENSMUST00000117160 1700123L14RikQ3V2K7 440 aa13.7□□□□□ -0.22
Cdh13-201ENSMUST00000117160 Esf1Q3V1V3 845 aaKnown RBP13.66□□□□□ -0.22
Cdh13-201ENSMUST00000117160 Supt5hO55201 1082 aaKnown RBP13.59□□□□□ -0.23
Cdh13-201ENSMUST00000117160 Cngb1E1AZ71 1325 aa13.56□□□□□ -0.24
Cdh13-201ENSMUST00000117160 Dnajc5bQ9CQ94 199 aa13.5□□□□□ -0.25
Cdh13-201ENSMUST00000117160 Rb1cc1Q9ESK9 1588 aa13.47□□□□□ -0.25
Cdh13-201ENSMUST00000117160 Sycp2Q9CUU3 1500 aa13.46□□□□□ -0.26
Cdh13-201ENSMUST00000117160 Trim41Q5NCC3 630 aa13.45□□□□□ -0.26
Cdh13-201ENSMUST00000117160 Aplp2Q06335 707 aa13.45□□□□□ -0.26
Cdh13-201ENSMUST00000117160 Ehmt2Q9Z148 1263 aaKnown RBP13.43□□□□□ -0.26
Cdh13-201ENSMUST00000117160 Anks4bQ8K3X6 423 aa13.42□□□□□ -0.26
Cdh13-201ENSMUST00000117160 Csrnp3P59055 597 aa13.41□□□□□ -0.26
Cdh13-201ENSMUST00000117160 PrkcshO08795 521 aa13.37□□□□□ -0.27
Cdh13-201ENSMUST00000117160 Il27Q8K3I6 234 aa13.3□□□□□ -0.28
Cdh13-201ENSMUST00000117160 Ubl4bQ9CQ84 188 aa13.29□□□□□ -0.28
Cdh13-201ENSMUST00000117160 Ccdc180J3QNE4 1664 aa13.27□□□□□ -0.29
Cdh13-201ENSMUST00000117160 Pds5bQ4VA53 1446 aaKnown RBP13.2□□□□□ -0.3
Cdh13-201ENSMUST00000117160 Dcaf1Q80TR8 1506 aa13.18□□□□□ -0.3
Cdh13-201ENSMUST00000117160 Rtl1Q7M732 1744 aa13.17□□□□□ -0.3
Cdh13-201ENSMUST00000117160 Baz1aO88379 1555 aa13.14□□□□□ -0.31
Cdh13-201ENSMUST00000117160 Ercc6F8VPZ5 1481 aa13.11□□□□□ -0.31
Cdh13-201ENSMUST00000117160 BicraF8VPZ9 1578 aa13.1□□□□□ -0.31
Cdh13-201ENSMUST00000117160 Zeb1Q64318 1117 aa13.04□□□□□ -0.32
Cdh13-201ENSMUST00000117160 Npm1Q61937 292 aaKnown RBP13.03□□□□□ -0.32
Cdh13-201ENSMUST00000117160 Cdk11bP24788 784 aaKnown RBP12.97□□□□□ -0.33
Cdh13-201ENSMUST00000117160 Atad2bE9Q166 1460 aaKnown RBP12.97□□□□□ -0.33
Cdh13-201ENSMUST00000117160 Cecr2E9Q2Z1 1453 aa12.95□□□□□ -0.34
Cdh13-201ENSMUST00000117160 Pelp1Q9DBD5 1123 aaKnown RBP12.94□□□□□ -0.34
Cdh13-201ENSMUST00000117160 Rtl5Q5DTT4 599 aa12.94□□□□□ -0.34
Cdh13-201ENSMUST00000117160 Fam71e1A1L3C1 212 aa12.92□□□□□ -0.34
Cdh13-201ENSMUST00000117160 Ifnlr1Q8CGK5 535 aa12.91□□□□□ -0.34
Cdh13-201ENSMUST00000117160 Pknox2Q8BG99 474 aa12.89□□□□□ -0.35
Cdh13-201ENSMUST00000117160 Gm38655A0A286YDK6 273 aa12.89□□□□□ -0.35
Cdh13-201ENSMUST00000117160 Sall2Q9QX96 1004 aa12.88□□□□□ -0.35
Cdh13-201ENSMUST00000117160 NefmP08553 848 aa12.85□□□□□ -0.35
Cdh13-201ENSMUST00000117160 Gab3Q8BSM5 595 aa12.85□□□□□ -0.35
Cdh13-201ENSMUST00000117160 Nop58Q6DFW4 536 aaKnown RBP12.83□□□□□ -0.35
Cdh13-201ENSMUST00000117160 Brd4Q9ESU6 1400 aaKnown RBP12.83□□□□□ -0.36
Cdh13-201ENSMUST00000117160 Npm2Q80W85 207 aa12.82□□□□□ -0.36
Cdh13-201ENSMUST00000117160 Phldb1Q6PDH0 1371 aaKnown RBP12.82□□□□□ -0.36
Cdh13-201ENSMUST00000117160 NrdcQ8BHG1 1161 aa12.81□□□□□ -0.36
Cdh13-201ENSMUST00000117160 Kif15Q6P9L6 1387 aa12.79□□□□□ -0.36
Cdh13-201ENSMUST00000117160 CatipB9EKE5 520 aa12.78□□□□□ -0.36
Cdh13-201ENSMUST00000117160 Crybg2B7ZCC2 1516 aa12.77□□□□□ -0.36
Cdh13-201ENSMUST00000117160 Smarca4Q3TKT4 1613 aaKnown RBP12.76□□□□□ -0.37
Cdh13-201ENSMUST00000117160 Hdac5Q9Z2V6 1113 aa12.76□□□□□ -0.37
Cdh13-201ENSMUST00000117160 Fgd1P52734 960 aa12.75□□□□□ -0.37
Cdh13-201ENSMUST00000117160 Cc2d2aQ8CFW7 1633 aa12.75□□□□□ -0.37
Cdh13-201ENSMUST00000117160 Iqgap2Q3UQ44 1575 aa12.74□□□□□ -0.37
Cdh13-201ENSMUST00000117160 Smarca2Q6DIC0 1577 aa12.74□□□□□ -0.37
Cdh13-201ENSMUST00000117160 HrcG5E8J6 738 aa12.72□□□□□ -0.37
Cdh13-201ENSMUST00000117160 Myt1lP97500 1187 aa12.69□□□□□ -0.38
Cdh13-201ENSMUST00000117160 Rsf1E9PWW9 1441 aaKnown RBP12.67□□□□□ -0.38
Cdh13-201ENSMUST00000117160 Wdr66E9Q743 1299 aa12.67□□□□□ -0.38
Cdh13-201ENSMUST00000117160 Tnnt3Q9QZ47 272 aa12.66□□□□□ -0.38
Cdh13-201ENSMUST00000117160 Frmpd1A2AKB4 1549 aa12.63□□□□□ -0.39
Cdh13-201ENSMUST00000117160 Anp32aO35381 247 aa12.61□□□□□ -0.39
Cdh13-201ENSMUST00000117160 Ttbk1Q6PCN3 1308 aa12.61□□□□□ -0.39
Cdh13-201ENSMUST00000117160 Cux2P70298 1426 aa12.61□□□□□ -0.39
Cdh13-201ENSMUST00000117160 CftrP26361 1476 aa12.6□□□□□ -0.39
Cdh13-201ENSMUST00000117160 Ccdc9Q8VC31 543 aaKnown RBP12.56□□□□□ -0.4
Cdh13-201ENSMUST00000117160 Mapk8ip2Q9ERE9 830 aa12.56□□□□□ -0.4
Cdh13-201ENSMUST00000117160 Plppr3Q7TPB0 716 aa12.54□□□□□ -0.4
Cdh13-201ENSMUST00000117160 Gtf3c3Q3TMP1 882 aa12.54□□□□□ -0.4
Cdh13-201ENSMUST00000117160 Synj1Q8CHC4 1574 aa12.53□□□□□ -0.4
Cdh13-201ENSMUST00000117160 Thoc2B1AZI6 1594 aaKnown RBP12.52□□□□□ -0.41
Cdh13-201ENSMUST00000117160 Fkbp15Q6P9Q6 1216 aaKnown RBP12.51□□□□□ -0.41
Cdh13-201ENSMUST00000117160 Mrc2Q64449 1479 aa12.5□□□□□ -0.41
Cdh13-201ENSMUST00000117160 Wdr62Q3U3T8 1523 aa12.49□□□□□ -0.41
Cdh13-201ENSMUST00000117160 Cep164Q5DU05 1446 aa12.48□□□□□ -0.41
Cdh13-201ENSMUST00000117160 BccipQ9CWI3 316 aa12.48□□□□□ -0.41
Cdh13-201ENSMUST00000117160 ClspnQ80YR7 1315 aa12.48□□□□□ -0.41
Cdh13-201ENSMUST00000117160 Gtf3c5Q8R2T8 520 aa12.48□□□□□ -0.41
Cdh13-201ENSMUST00000117160 Irx3P81067 507 aa12.45□□□□□ -0.42
Cdh13-201ENSMUST00000117160 Plcd4Q8K3R3 807 aa12.44□□□□□ -0.42
Cdh13-201ENSMUST00000117160 Chic1Q8CBW7 227 aa12.42□□□□□ -0.42
Cdh13-201ENSMUST00000117160 Upf2A2AT37 1269 aaKnown RBP12.41□□□□□ -0.42
Cdh13-201ENSMUST00000117160 SafbD3YXK2 937 aaKnown RBP12.41□□□□□ -0.42
Cdh13-201ENSMUST00000117160 Ccdc18Q640L5 1455 aa12.41□□□□□ -0.42
Cdh13-201ENSMUST00000117160 Pabpn1Q8CCS6 302 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms