RNA–Protein interactions for RNA: ENSMUST00000115657.9

Pcdha11-202, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-202ENSMUST00000115657 Ifnlr1Q8CGK5 535 aa19.3■□□□□ 0.68
Pcdha11-202ENSMUST00000115657 Prdm10Q3UTQ7 1184 aa19.29■□□□□ 0.68
Pcdha11-202ENSMUST00000115657 Hsp90aa1P07901 733 aaKnown RBP19.29■□□□□ 0.68
Pcdha11-202ENSMUST00000115657 Kdm5dQ62240 1548 aa19.26■□□□□ 0.67
Pcdha11-202ENSMUST00000115657 ArxO35085 564 aa19.25■□□□□ 0.67
Pcdha11-202ENSMUST00000115657 Ubl4bQ9CQ84 188 aa19.25■□□□□ 0.67
Pcdha11-202ENSMUST00000115657 Mia2Q91ZV0 1396 aa19.25■□□□□ 0.67
Pcdha11-202ENSMUST00000115657 Chic2Q9D9G3 165 aa19.24■□□□□ 0.67
Pcdha11-202ENSMUST00000115657 Cwc22Q8C5N3 908 aaKnown RBP19.2■□□□□ 0.66
Pcdha11-202ENSMUST00000115657 Ccdc18Q640L5 1455 aa19.19■□□□□ 0.66
Pcdha11-202ENSMUST00000115657 CatipB9EKE5 520 aa19.16■□□□□ 0.66
Pcdha11-202ENSMUST00000115657 Fam71e1A1L3C1 212 aa19.15■□□□□ 0.66
Pcdha11-202ENSMUST00000115657 Crybg2B7ZCC2 1516 aa19.15■□□□□ 0.66
Pcdha11-202ENSMUST00000115657 Kif15Q6P9L6 1387 aa19.14■□□□□ 0.65
Pcdha11-202ENSMUST00000115657 Fkbp15Q6P9Q6 1216 aaKnown RBP19.11■□□□□ 0.65
Pcdha11-202ENSMUST00000115657 Fmn1Q05860 1466 aa19.1■□□□□ 0.65
Pcdha11-202ENSMUST00000115657 Ccdc27Q3V036 639 aa19.1■□□□□ 0.65
Pcdha11-202ENSMUST00000115657 Ofd1Q80Z25 1017 aa19.1■□□□□ 0.65
Pcdha11-202ENSMUST00000115657 Rad21Q61550 635 aaKnown RBP19.07■□□□□ 0.64
Pcdha11-202ENSMUST00000115657 Cep162Q6ZQ06 1403 aa19.05■□□□□ 0.64
Pcdha11-202ENSMUST00000115657 Ercc6F8VPZ5 1481 aa19.04■□□□□ 0.64
Pcdha11-202ENSMUST00000115657 CanxP35564 591 aaKnown RBP19.01■□□□□ 0.63
Pcdha11-202ENSMUST00000115657 Ccdc88bQ4QRL3 1481 aa19■□□□□ 0.63
Pcdha11-202ENSMUST00000115657 Rgl3Q3UYI5 709 aa18.99■□□□□ 0.63
Pcdha11-202ENSMUST00000115657 Htatsf1Q8BGC0 757 aa18.97■□□□□ 0.63
Pcdha11-202ENSMUST00000115657 Mbd3Q9Z2D8 285 aaKnown RBP18.97■□□□□ 0.63
Pcdha11-202ENSMUST00000115657 Bcl11aQ9QYE3 773 aa18.97■□□□□ 0.63
Pcdha11-202ENSMUST00000115657 Ppm1gQ61074 542 aa18.96■□□□□ 0.63
Pcdha11-202ENSMUST00000115657 Fgd1P52734 960 aa18.96■□□□□ 0.63
Pcdha11-202ENSMUST00000115657 Rangap1P46061 589 aaKnown RBP18.95■□□□□ 0.62
Pcdha11-202ENSMUST00000115657 Card11Q8CIS0 1159 aa18.95■□□□□ 0.62
Pcdha11-202ENSMUST00000115657 Hsp90ab1P11499 724 aaKnown RBP18.94■□□□□ 0.62
Pcdha11-202ENSMUST00000115657 DekQ7TNV0 380 aaKnown RBP18.94■□□□□ 0.62
Pcdha11-202ENSMUST00000115657 Trim44Q9QXA7 346 aa18.92■□□□□ 0.62
Pcdha11-202ENSMUST00000115657 Mtus2Q3UHD3 1353 aa18.91■□□□□ 0.62
Pcdha11-202ENSMUST00000115657 Ythdc1E9Q5K9 736 aaKnown RBP18.9■□□□□ 0.62
Pcdha11-202ENSMUST00000115657 Trim30dE9PWL0 497 aa18.87■□□□□ 0.61
Pcdha11-202ENSMUST00000115657 Fyco1Q8VDC1 1437 aa18.86■□□□□ 0.61
Pcdha11-202ENSMUST00000115657 Lmod3E9QA62 571 aa18.84■□□□□ 0.61
Pcdha11-202ENSMUST00000115657 Tcerg1Q8CGF7 1100 aaKnown RBP18.82■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 Chmp4bQ9D8B3 224 aaKnown RBP18.82■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 Smarca2Q6DIC0 1577 aa18.82■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 Arhgap35Q91YM2 1499 aa18.82■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 Baz1bQ9Z277 1479 aa18.82■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 Arid4bA2CG63 1314 aaKnown RBP18.81■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 Sycp2Q9CUU3 1500 aa18.8■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 CntlnA2AM05 1397 aa18.8■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 P3h3Q8CG70 732 aa18.78■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 Pds5bQ4VA53 1446 aaKnown RBP18.78■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 Hspa5P20029 655 aaKnown RBP18.77■□□□□ 0.6
Pcdha11-202ENSMUST00000115657 Vsig10D3YX43 558 aa18.76■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 Plppr3Q7TPB0 716 aa18.76■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 SafbD3YXK2 937 aaKnown RBP18.76■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 CftrP26361 1476 aa18.75■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 IqubQ8CDK3 788 aa18.75■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 Map7O88735 730 aa18.75■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 Mroh3A0A1D5RM54 893 aa18.74■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 Grwd1Q810D6 446 aaKnown RBP18.74■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 Safb2Q80YR5 991 aaKnown RBP18.73■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 Srpk2O54781 681 aaKnown RBP18.71■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 Irx3P81067 507 aa18.71■□□□□ 0.59
Pcdha11-202ENSMUST00000115657 Trim26Q99PN3 545 aa18.7■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 Kif27Q7M6Z4 1394 aa18.69■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 PtmaP26350 111 aa18.69■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 Rwdd1Q9CQK7 243 aa18.68■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 Zfp777B9EKF4 885 aa18.68■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 Pkd2O35245 966 aa18.66■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 Gm20521D3Z5F7 333 aa18.65■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 NudcO35685 332 aaKnown RBP18.65■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 Rapgef2Q8CHG7 1496 aa18.65■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 Arhgap27A2AB59 869 aa18.65■□□□□ 0.58
Pcdha11-202ENSMUST00000115657 Ipo9Q91YE6 1041 aa18.64■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Mapk8ip3Q9ESN9 1337 aa18.64■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Fhad1A6PWD2 1420 aa18.64■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Aebp1Q640N1 1128 aa18.64■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Wwc2Q6NXJ0 1187 aa18.63■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Znf326O88291 580 aa18.61■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Kdm2aP59997 1161 aa18.6■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Supt16hQ920B9 1047 aa18.6■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Plcb2A3KGF7 1181 aa18.6■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Rrp7aQ9D1C9 280 aaKnown RBP18.59■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Mphosph9A6H5Y1 991 aa18.59■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Zscan21Q07231 555 aa18.59■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Rock2P70336 1388 aa18.59■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Rundc1Q0VDN7 615 aa18.58■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Exoc6Q8R313 802 aa18.58■□□□□ 0.57
Pcdha11-202ENSMUST00000115657 Mak16Q8BGS0 296 aaKnown RBP18.58■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 KnstrnQ9D9Z1 312 aaKnown RBP18.58■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 EspnQ9ET47 871 aa18.57■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Carmil1Q6EDY6 1374 aa18.57■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Synj1Q8CHC4 1574 aa18.56■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 AU015836B2RUM3 263 aa18.56■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 UacaQ8CGB3 1411 aa18.56■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Exosc9Q9JHI7 438 aaKnown RBP18.55■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Dnai1Q8C0M8 701 aa18.54■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 PtmsQ9D0J8 101 aaKnown RBP18.54■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Map4P27546 1125 aaKnown RBP18.54■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Neurod2Q62414 383 aa18.54■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Iqcf3Q9D498 203 aa18.53■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Apbb1Q9QXJ1 710 aa18.53■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms