RNA–Protein interactions for RNA: ENSMUST00000113701.7

Tpm1-214, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,677 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-214ENSMUST00000113701 Clip1Q922J3 1391 aa24.19■■□□□ 1.46
Tpm1-214ENSMUST00000113701 Polr1aO35134 1717 aaKnown RBP24.16■■□□□ 1.46
Tpm1-214ENSMUST00000113701 EprsQ8CGC7 1512 aaKnown RBP24.13■■□□□ 1.45
Tpm1-214ENSMUST00000113701 Adamts12Q811B3 1600 aa24.12■■□□□ 1.45
Tpm1-214ENSMUST00000113701 Rpap1Q80TE0 1409 aa24.12■■□□□ 1.45
Tpm1-214ENSMUST00000113701 TchhA0A0B4J1F9 1599 aa24.04■■□□□ 1.44
Tpm1-214ENSMUST00000113701 Myt1lP97500 1187 aa24.01■■□□□ 1.43
Tpm1-214ENSMUST00000113701 WizO88286 1684 aaKnown RBP24.01■■□□□ 1.43
Tpm1-214ENSMUST00000113701 Abca16E9PWJ7 1678 aa24■■□□□ 1.43
Tpm1-214ENSMUST00000113701 Cux1P53564 1515 aa23.99■■□□□ 1.43
Tpm1-214ENSMUST00000113701 CadpsQ80TJ1 1355 aa23.98■■□□□ 1.43
Tpm1-214ENSMUST00000113701 Shroom2A2ALU4 1481 aa23.98■■□□□ 1.43
Tpm1-214ENSMUST00000113701 Fyco1Q8VDC1 1437 aa23.97■■□□□ 1.43
Tpm1-214ENSMUST00000113701 Ankrd26Q811D2 1581 aa23.95■■□□□ 1.42
Tpm1-214ENSMUST00000113701 Fgd6Q69ZL1 1399 aa23.94■■□□□ 1.42
Tpm1-214ENSMUST00000113701 Erich3F6QRE9 1637 aa23.94■■□□□ 1.42
Tpm1-214ENSMUST00000113701 Abca5Q8K448 1642 aa23.93■■□□□ 1.42
Tpm1-214ENSMUST00000113701 Gm7298A0A0N4SVU1 1476 aa23.93■■□□□ 1.42
Tpm1-214ENSMUST00000113701 PxdnQ3UQ28 1475 aa23.93■■□□□ 1.42
Tpm1-214ENSMUST00000113701 Abcc2Q8VI47 1543 aa23.93■■□□□ 1.42
Tpm1-214ENSMUST00000113701 Soga1E1U8D0 1418 aa23.92■■□□□ 1.42
Tpm1-214ENSMUST00000113701 Eea1Q8BL66 1411 aa23.9■■□□□ 1.42
Tpm1-214ENSMUST00000113701 Map3k4O08648 1597 aa23.88■■□□□ 1.41
Tpm1-214ENSMUST00000113701 Dnmt1P13864 1620 aaKnown RBP23.88■■□□□ 1.41
Tpm1-214ENSMUST00000113701 Setd5Q5XJV7 1441 aa23.83■■□□□ 1.41
Tpm1-214ENSMUST00000113701 Lmo7E9PYF4 1699 aaKnown RBP23.81■■□□□ 1.4
Tpm1-214ENSMUST00000113701 Slx4Q6P1D7 1565 aa23.77■■□□□ 1.4
Tpm1-214ENSMUST00000113701 Arhgap27A2AB59 869 aa23.74■■□□□ 1.39
Tpm1-214ENSMUST00000113701 Arap1Q4LDD4 1452 aa23.73■■□□□ 1.39
Tpm1-214ENSMUST00000113701 BC005561E9Q5E2 1589 aa23.72■■□□□ 1.39
Tpm1-214ENSMUST00000113701 Pabpn1Q8CCS6 302 aaKnown RBP23.71■■□□□ 1.39
Tpm1-214ENSMUST00000113701 BlmO88700 1416 aa23.7■■□□□ 1.38
Tpm1-214ENSMUST00000113701 Arhgef5E9Q7D5 1581 aa23.69■■□□□ 1.38
Tpm1-214ENSMUST00000113701 Pcf11G3X9Z4 1553 aa23.69■■□□□ 1.38
Tpm1-214ENSMUST00000113701 Abcc1O35379 1528 aa23.67■■□□□ 1.38
Tpm1-214ENSMUST00000113701 Neo1P97798 1493 aa23.67■■□□□ 1.38
Tpm1-214ENSMUST00000113701 AknaQ80VW7 1404 aa23.67■■□□□ 1.38
Tpm1-214ENSMUST00000113701 Aebp1Q640N1 1128 aa23.65■■□□□ 1.38
Tpm1-214ENSMUST00000113701 WrnO09053 1401 aa23.65■■□□□ 1.38
Tpm1-214ENSMUST00000113701 Mapk8ip2Q9ERE9 830 aa23.64■■□□□ 1.38
Tpm1-214ENSMUST00000113701 CntlnA2AM05 1397 aa23.62■■□□□ 1.37
Tpm1-214ENSMUST00000113701 Chd1P40201 1711 aa23.62■■□□□ 1.37
Tpm1-214ENSMUST00000113701 Peg3Q3URU2 1571 aa23.61■■□□□ 1.37
Tpm1-214ENSMUST00000113701 Gm14025A2AP89 1413 aa23.6■■□□□ 1.37
Tpm1-214ENSMUST00000113701 Plppr3Q7TPB0 716 aa23.6■■□□□ 1.37
Tpm1-214ENSMUST00000113701 Arhgef12Q8R4H2 1543 aaKnown RBP23.59■■□□□ 1.37
Tpm1-214ENSMUST00000113701 Rrbp1Q99PL5 1605 aaKnown RBP23.59■■□□□ 1.37
Tpm1-214ENSMUST00000113701 Dnajc5P60904 198 aa23.58■■□□□ 1.37
Tpm1-214ENSMUST00000113701 Tiam1Q60610 1591 aa23.56■■□□□ 1.36
Tpm1-214ENSMUST00000113701 Jph4Q80WT0 628 aa23.55■■□□□ 1.36
Tpm1-214ENSMUST00000113701 Zcchc11B2RX14 1644 aaKnown RBP23.55■■□□□ 1.36
Tpm1-214ENSMUST00000113701 Naip1Q9QWK5 1403 aa23.52■■□□□ 1.36
Tpm1-214ENSMUST00000113701 Kif27Q7M6Z4 1394 aa23.5■■□□□ 1.35
Tpm1-214ENSMUST00000113701 Pelp1Q9DBD5 1123 aaKnown RBP23.5■■□□□ 1.35
Tpm1-214ENSMUST00000113701 Gapvd1Q6PAR5 1458 aa23.5■■□□□ 1.35
Tpm1-214ENSMUST00000113701 Rapgef6Q5NCJ1 1609 aa23.5■■□□□ 1.35
Tpm1-214ENSMUST00000113701 Arhgap31A6X8Z5 1425 aa23.45■■□□□ 1.34
Tpm1-214ENSMUST00000113701 Ythdc2B2RR83 1445 aaKnown RBP23.44■■□□□ 1.34
Tpm1-214ENSMUST00000113701 Col17a1Q07563 1470 aa23.44■■□□□ 1.34
Tpm1-214ENSMUST00000113701 Ncoa2Q61026 1462 aa23.44■■□□□ 1.34
Tpm1-214ENSMUST00000113701 Cep170Q6A065 1588 aa23.43■■□□□ 1.34
Tpm1-214ENSMUST00000113701 Ap3b1Q9Z1T1 1105 aa23.43■■□□□ 1.34
Tpm1-214ENSMUST00000113701 Ccdc141E9Q8Q6 1531 aa23.43■■□□□ 1.34
Tpm1-214ENSMUST00000113701 Gm1043A0A140LJC2 1431 aa23.42■■□□□ 1.34
Tpm1-214ENSMUST00000113701 Kdm5bQ80Y84 1544 aa23.42■■□□□ 1.34
Tpm1-214ENSMUST00000113701 PtprtQ99M80 1454 aa23.36■■□□□ 1.33
Tpm1-214ENSMUST00000113701 Arhgef11Q68FM7 1552 aa23.36■■□□□ 1.33
Tpm1-214ENSMUST00000113701 Mroh2aD3Z750 1679 aa23.33■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Kiaa1210E9Q0C6 1637 aa23.32■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Igf1rQ60751 1373 aa23.31■■□□□ 1.32
Tpm1-214ENSMUST00000113701 AI481877A2ALV5 1481 aa23.31■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Mug1P28665 1476 aa23.3■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Magi1Q6RHR9 1471 aa23.3■■□□□ 1.32
Tpm1-214ENSMUST00000113701 NhsB1AV60 1647 aa23.29■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Phf23Q8BSN5 401 aa23.29■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Fam163aQ8CAA5 168 aa23.29■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Dhx57Q6P5D3 1388 aaKnown RBP23.29■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Plekhg3Q4VAC9 1341 aa23.29■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Adgrl3Q80TS3 1537 aa23.28■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Gcc2Q8CHG3 1679 aa23.28■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Kiaa1551Q5DTW7 1521 aa23.27■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Ncoa3O09000 1398 aa23.27■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Wdr7Q920I9 1489 aa23.27■■□□□ 1.32
Tpm1-214ENSMUST00000113701 Cul7Q8VE73 1689 aa23.26■■□□□ 1.31
Tpm1-214ENSMUST00000113701 Fancd2Q80V62 1450 aa23.26■■□□□ 1.31
Tpm1-214ENSMUST00000113701 Gm156Q58A37 223 aa23.25■■□□□ 1.31
Tpm1-214ENSMUST00000113701 Lmtk2Q3TYD6 1471 aa23.25■■□□□ 1.31
Tpm1-214ENSMUST00000113701 Mapkbp1Q6NS57 1503 aa23.24■■□□□ 1.31
Tpm1-214ENSMUST00000113701 Cdc42bpaQ3UU96 1719 aa23.23■■□□□ 1.31
Tpm1-214ENSMUST00000113701 NexmifQ5DTT1 1515 aa23.19■■□□□ 1.3
Tpm1-214ENSMUST00000113701 Setbp1Q9Z180 1582 aa23.18■■□□□ 1.3
Tpm1-214ENSMUST00000113701 Lmod2Q3UHZ5 550 aa23.16■■□□□ 1.3
Tpm1-214ENSMUST00000113701 Prex2Q3LAC4 1598 aa23.13■■□□□ 1.29
Tpm1-214ENSMUST00000113701 Fam208aQ69ZR9 1610 aaKnown RBP23.13■■□□□ 1.29
Tpm1-214ENSMUST00000113701 Lrrc9Q8CDN9 1456 aa23.13■■□□□ 1.29
Tpm1-214ENSMUST00000113701 Fkbp15Q6P9Q6 1216 aaKnown RBP23.13■■□□□ 1.29
Tpm1-214ENSMUST00000113701 Abca8bQ8K440 1620 aa23.12■■□□□ 1.29
Tpm1-214ENSMUST00000113701 Atp10dQ8K2X1 1416 aa23.09■■□□□ 1.29
Tpm1-214ENSMUST00000113701 Ccnb3Q810T2 1396 aa23.07■■□□□ 1.28
Tpm1-214ENSMUST00000113701 Pprc1Q6NZN1 1644 aa23.06■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms