RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 NischQ80TM9 1593 aa21.83■■□□□ 1.09
Ubr3-202ENSMUST00000112251 Fkbp15Q6P9Q6 1216 aaKnown RBP21.82■■□□□ 1.08
Ubr3-202ENSMUST00000112251 Trim30dE9PWL0 497 aa21.82■■□□□ 1.08
Ubr3-202ENSMUST00000112251 Tnnt2P50752 301 aa21.8■■□□□ 1.08
Ubr3-202ENSMUST00000112251 CanxP35564 591 aaKnown RBP21.8■■□□□ 1.08
Ubr3-202ENSMUST00000112251 Adam1bQ8R534 806 aa21.78■■□□□ 1.08
Ubr3-202ENSMUST00000112251 Eid3Q3V124 375 aa21.78■■□□□ 1.08
Ubr3-202ENSMUST00000112251 Ccdc9Q8VC31 543 aaKnown RBP21.78■■□□□ 1.08
Ubr3-202ENSMUST00000112251 Wdr43Q6ZQL4 677 aaKnown RBP21.78■■□□□ 1.08
Ubr3-202ENSMUST00000112251 P3h3Q8CG70 732 aa21.75■■□□□ 1.07
Ubr3-202ENSMUST00000112251 Noc3lQ8VI84 807 aaKnown RBP21.73■■□□□ 1.07
Ubr3-202ENSMUST00000112251 Safb2Q80YR5 991 aaKnown RBP21.73■■□□□ 1.07
Ubr3-202ENSMUST00000112251 Zcchc6Q5BLK4 1491 aaKnown RBP21.73■■□□□ 1.07
Ubr3-202ENSMUST00000112251 Npm1Q61937 292 aaKnown RBP21.71■■□□□ 1.07
Ubr3-202ENSMUST00000112251 Gm35339A0A140LHH9 1649 aa21.65■■□□□ 1.06
Ubr3-202ENSMUST00000112251 Spryd3E9Q9B3 442 aa21.64■■□□□ 1.05
Ubr3-202ENSMUST00000112251 Pes1Q9EQ61 584 aaKnown RBP21.63■■□□□ 1.05
Ubr3-202ENSMUST00000112251 Anks4bQ8K3X6 423 aa21.61■■□□□ 1.05
Ubr3-202ENSMUST00000112251 Casc1Q6TDU8 730 aa21.6■■□□□ 1.05
Ubr3-202ENSMUST00000112251 Aplp2Q06335 707 aa21.59■■□□□ 1.05
Ubr3-202ENSMUST00000112251 SetQ9EQU5 289 aaKnown RBP21.59■■□□□ 1.05
Ubr3-202ENSMUST00000112251 Podxl2Q8CAE9 603 aa21.57■■□□□ 1.04
Ubr3-202ENSMUST00000112251 Htatsf1Q8BGC0 757 aa21.56■■□□□ 1.04
Ubr3-202ENSMUST00000112251 Erich6bQ9D4S6 220 aa21.51■■□□□ 1.03
Ubr3-202ENSMUST00000112251 Pcmtd1P59913 357 aa21.48■■□□□ 1.03
Ubr3-202ENSMUST00000112251 Sh3bp5Q9Z131 463 aa21.47■■□□□ 1.03
Ubr3-202ENSMUST00000112251 Calcoco2A2A6M5 331 aa21.46■■□□□ 1.03
Ubr3-202ENSMUST00000112251 Apbb1Q9QXJ1 710 aa21.46■■□□□ 1.03
Ubr3-202ENSMUST00000112251 Mrs2Q5NCE8 434 aa21.44■■□□□ 1.02
Ubr3-202ENSMUST00000112251 Anapc15P60007 132 aa21.42■■□□□ 1.02
Ubr3-202ENSMUST00000112251 Isy1Q69ZQ2 285 aaKnown RBP21.41■■□□□ 1.02
Ubr3-202ENSMUST00000112251 Fam71e1A1L3C1 212 aa21.41■■□□□ 1.02
Ubr3-202ENSMUST00000112251 Armcx1Q9CX83 456 aa21.39■■□□□ 1.01
Ubr3-202ENSMUST00000112251 Sall2Q9QX96 1004 aa21.35■■□□□ 1.01
Ubr3-202ENSMUST00000112251 Gm6268A2A3U9 297 aa21.34■■□□□ 1.01
Ubr3-202ENSMUST00000112251 Ccdc27Q3V036 639 aa21.33■■□□□ 1.01
Ubr3-202ENSMUST00000112251 Dbr1Q923B1 550 aa21.33■■□□□ 1
Ubr3-202ENSMUST00000112251 Wwc2Q6NXJ0 1187 aa21.32■■□□□ 1
Ubr3-202ENSMUST00000112251 MsnP26041 577 aaKnown RBP21.3■■□□□ 1
Ubr3-202ENSMUST00000112251 Taok2Q6ZQ29 1240 aa21.29■■□□□ 1
Ubr3-202ENSMUST00000112251 Ftsj3Q9DBE9 838 aaKnown RBP21.29■■□□□ 1
Ubr3-202ENSMUST00000112251 NgefQ8CHT1 710 aa21.29■■□□□ 1
Ubr3-202ENSMUST00000112251 Chic2Q9D9G3 165 aa21.28■■□□□ 1
Ubr3-202ENSMUST00000112251 Gm973E9Q295 1059 aa21.28■■□□□ 1
Ubr3-202ENSMUST00000112251 Hsp90b1P08113 802 aaKnown RBP21.27■■□□□ 1
Ubr3-202ENSMUST00000112251 Dnttip2Q8R2M2 758 aaKnown RBP21.27■■□□□ 1
Ubr3-202ENSMUST00000112251 1700019A02RikA0A087WPV9 146 aa21.27■■□□□ 1
Ubr3-202ENSMUST00000112251 Neurod2Q62414 383 aa21.27■■□□□ 1
Ubr3-202ENSMUST00000112251 Map7O88735 730 aa21.26■□□□□ 0.99
Ubr3-202ENSMUST00000112251 Rassf8Q8CJ96 419 aa21.24■□□□□ 0.99
Ubr3-202ENSMUST00000112251 Mical1Q8VDP3 1048 aa21.21■□□□□ 0.99
Ubr3-202ENSMUST00000112251 MccE9PWI3 1003 aa21.2■□□□□ 0.98
Ubr3-202ENSMUST00000112251 Exosc9Q9JHI7 438 aaKnown RBP21.18■□□□□ 0.98
Ubr3-202ENSMUST00000112251 Ofd1Q80Z25 1017 aa21.18■□□□□ 0.98
Ubr3-202ENSMUST00000112251 Arid4aF8VPQ2 1261 aaKnown RBP21.17■□□□□ 0.98
Ubr3-202ENSMUST00000112251 Ppm1gQ61074 542 aa21.17■□□□□ 0.98
Ubr3-202ENSMUST00000112251 IqubQ8CDK3 788 aa21.17■□□□□ 0.98
Ubr3-202ENSMUST00000112251 Gpatch11Q3UFS4 262 aa21.15■□□□□ 0.98
Ubr3-202ENSMUST00000112251 Cald1E9QA15 768 aaKnown RBP21.15■□□□□ 0.98
Ubr3-202ENSMUST00000112251 Mapk8ip3Q9ESN9 1337 aa21.15■□□□□ 0.98
Ubr3-202ENSMUST00000112251 Tpm3-rs7D3Z2H9 248 aa21.14■□□□□ 0.98
Ubr3-202ENSMUST00000112251 Kiaa0754Q69ZZ9 979 aa21.14■□□□□ 0.97
Ubr3-202ENSMUST00000112251 B4galnt3Q6L8S8 986 aa21.13■□□□□ 0.97
Ubr3-202ENSMUST00000112251 AU015836B2RUM3 263 aa21.13■□□□□ 0.97
Ubr3-202ENSMUST00000112251 Clip1Q922J3 1391 aa21.12■□□□□ 0.97
Ubr3-202ENSMUST00000112251 Kdm2aP59997 1161 aa21.12■□□□□ 0.97
Ubr3-202ENSMUST00000112251 Ncbp3Q8BZR9 615 aaKnown RBP21.11■□□□□ 0.97
Ubr3-202ENSMUST00000112251 Vps53Q8CCB4 832 aa21.1■□□□□ 0.97
Ubr3-202ENSMUST00000112251 Abcc9P70170 1546 aa21.1■□□□□ 0.97
Ubr3-202ENSMUST00000112251 Irx3P81067 507 aa21.09■□□□□ 0.97
Ubr3-202ENSMUST00000112251 Ccer2J3QPU5 274 aa21.09■□□□□ 0.97
Ubr3-202ENSMUST00000112251 Q8BT18 775 aa21.08■□□□□ 0.96
Ubr3-202ENSMUST00000112251 Bcl11aQ9QYE3 773 aa21.07■□□□□ 0.96
Ubr3-202ENSMUST00000112251 CgnP59242 1191 aa21.07■□□□□ 0.96
Ubr3-202ENSMUST00000112251 RdxP26043 583 aaKnown RBP21.07■□□□□ 0.96
Ubr3-202ENSMUST00000112251 Rgl3Q3UYI5 709 aa21.07■□□□□ 0.96
Ubr3-202ENSMUST00000112251 Map7d2A2AG50 781 aa21.05■□□□□ 0.96
Ubr3-202ENSMUST00000112251 Chmp4bQ9D8B3 224 aaKnown RBP21.03■□□□□ 0.96
Ubr3-202ENSMUST00000112251 MyclP10166 368 aa21.02■□□□□ 0.96
Ubr3-202ENSMUST00000112251 Clstn2Q9ER65 966 aa21.01■□□□□ 0.95
Ubr3-202ENSMUST00000112251 Dnai2A2AC93 623 aa21■□□□□ 0.95
Ubr3-202ENSMUST00000112251 R3hcc1Q8BSI6 488 aa21■□□□□ 0.95
Ubr3-202ENSMUST00000112251 KnstrnQ9D9Z1 312 aaKnown RBP21■□□□□ 0.95
Ubr3-202ENSMUST00000112251 Iqcf3Q9D498 203 aa20.99■□□□□ 0.95
Ubr3-202ENSMUST00000112251 Iffo2Q8R2V2 512 aa20.98■□□□□ 0.95
Ubr3-202ENSMUST00000112251 Eif4g2Q62448 906 aaKnown RBP20.97■□□□□ 0.95
Ubr3-202ENSMUST00000112251 Tpm3P21107 285 aaKnown RBP20.95■□□□□ 0.94
Ubr3-202ENSMUST00000112251 Srpk2O54781 681 aaKnown RBP20.94■□□□□ 0.94
Ubr3-202ENSMUST00000112251 Fam193aQ8CGI1 1231 aaKnown RBP20.94■□□□□ 0.94
Ubr3-202ENSMUST00000112251 Paf1Q8K2T8 535 aa20.93■□□□□ 0.94
Ubr3-202ENSMUST00000112251 CrebrfQ8CDG5 640 aaKnown RBP20.92■□□□□ 0.94
Ubr3-202ENSMUST00000112251 Grwd1Q810D6 446 aaKnown RBP20.92■□□□□ 0.94
Ubr3-202ENSMUST00000112251 IbspQ61711 324 aa20.92■□□□□ 0.94
Ubr3-202ENSMUST00000112251 Becn1O88597 448 aa20.9■□□□□ 0.94
Ubr3-202ENSMUST00000112251 Gm20521D3Z5F7 333 aa20.89■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Trim30aP15533 496 aa20.88■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Ecm2Q5FW85 670 aa20.88■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Nol10Q5RJG1 687 aaKnown RBP20.88■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Rrp12Q6P5B0 1295 aaKnown RBP20.88■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Tpd52l1O54818 204 aa20.87■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms