RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Rhox8Q6VSS7 320 aa28.35■■■□□ 2.13
Ubr3-202ENSMUST00000112251 Cngb1E1AZ71 1325 aa27.07■■□□□ 1.92
Ubr3-202ENSMUST00000112251 Pelp1Q9DBD5 1123 aaKnown RBP26.99■■□□□ 1.91
Ubr3-202ENSMUST00000112251 Rpgrip1Q9EPQ2 1331 aa26.71■■□□□ 1.87
Ubr3-202ENSMUST00000112251 Amer1Q7TS75 1132 aa26.67■■□□□ 1.86
Ubr3-202ENSMUST00000112251 Las1lA2BE28 776 aaKnown RBP26.65■■□□□ 1.86
Ubr3-202ENSMUST00000112251 Ehmt2Q9Z148 1263 aaKnown RBP26.49■■□□□ 1.83
Ubr3-202ENSMUST00000112251 Wdr66E9Q743 1299 aa26.31■■□□□ 1.8
Ubr3-202ENSMUST00000112251 Ube2uB1AUC4 352 aa26.14■■□□□ 1.78
Ubr3-202ENSMUST00000112251 4930567H17RikQ3V0K5 233 aa25.78■■□□□ 1.72
Ubr3-202ENSMUST00000112251 Zeb1Q64318 1117 aa25.75■■□□□ 1.71
Ubr3-202ENSMUST00000112251 Ttbk1Q6PCN3 1308 aa25.4■■□□□ 1.66
Ubr3-202ENSMUST00000112251 CenpbP27790 599 aa25.2■■□□□ 1.62
Ubr3-202ENSMUST00000112251 Esf1Q3V1V3 845 aaKnown RBP25.15■■□□□ 1.62
Ubr3-202ENSMUST00000112251 Slc24a1Q91WD8 1130 aa25.11■■□□□ 1.61
Ubr3-202ENSMUST00000112251 4933416C03RikQ3V063 378 aa24.96■■□□□ 1.59
Ubr3-202ENSMUST00000112251 Npm2Q80W85 207 aa24.9■■□□□ 1.58
Ubr3-202ENSMUST00000112251 Gab3Q8BSM5 595 aa24.83■■□□□ 1.57
Ubr3-202ENSMUST00000112251 Ccdc136Q3TVA9 1136 aa24.76■■□□□ 1.55
Ubr3-202ENSMUST00000112251 Myt1lP97500 1187 aa24.73■■□□□ 1.55
Ubr3-202ENSMUST00000112251 Stra8P70278 393 aa24.69■■□□□ 1.54
Ubr3-202ENSMUST00000112251 NeflP08551 543 aa24.27■■□□□ 1.48
Ubr3-202ENSMUST00000112251 UbtfP25976 765 aaKnown RBP24.22■■□□□ 1.47
Ubr3-202ENSMUST00000112251 Eif5bQ05D44 1216 aaKnown RBP24.19■■□□□ 1.46
Ubr3-202ENSMUST00000112251 NrdcQ8BHG1 1161 aa24.03■■□□□ 1.44
Ubr3-202ENSMUST00000112251 Myt1Q8CFC2 1127 aa23.96■■□□□ 1.43
Ubr3-202ENSMUST00000112251 Os9Q8K2C7 672 aa23.96■■□□□ 1.43
Ubr3-202ENSMUST00000112251 Anp32bQ9EST5 272 aaKnown RBP23.94■■□□□ 1.42
Ubr3-202ENSMUST00000112251 Neurod1Q60867 357 aa23.92■■□□□ 1.42
Ubr3-202ENSMUST00000112251 Cdk11bP24788 784 aaKnown RBP23.89■■□□□ 1.41
Ubr3-202ENSMUST00000112251 NefmP08553 848 aa23.86■■□□□ 1.41
Ubr3-202ENSMUST00000112251 HrcG5E8J6 738 aa23.83■■□□□ 1.41
Ubr3-202ENSMUST00000112251 Trim41Q5NCC3 630 aa23.82■■□□□ 1.4
Ubr3-202ENSMUST00000112251 CatipB9EKE5 520 aa23.71■■□□□ 1.39
Ubr3-202ENSMUST00000112251 Tnnt3Q9QZ47 272 aa23.67■■□□□ 1.38
Ubr3-202ENSMUST00000112251 Acin1Q9JIX8 1338 aaKnown RBP23.64■■□□□ 1.37
Ubr3-202ENSMUST00000112251 NclP09405 707 aaKnown RBP23.62■■□□□ 1.37
Ubr3-202ENSMUST00000112251 DaxxO35613 739 aa23.56■■□□□ 1.36
Ubr3-202ENSMUST00000112251 Ppargc1bQ8VHJ7 1014 aa23.55■■□□□ 1.36
Ubr3-202ENSMUST00000112251 Fam50aQ9WV03 339 aaKnown RBP23.48■■□□□ 1.35
Ubr3-202ENSMUST00000112251 Nop58Q6DFW4 536 aaKnown RBP23.47■■□□□ 1.35
Ubr3-202ENSMUST00000112251 Rtl5Q5DTT4 599 aa23.45■■□□□ 1.34
Ubr3-202ENSMUST00000112251 Chic1Q8CBW7 227 aa23.45■■□□□ 1.34
Ubr3-202ENSMUST00000112251 Ap3b1Q9Z1T1 1105 aa23.39■■□□□ 1.33
Ubr3-202ENSMUST00000112251 DiexfQ8BTT6 772 aaKnown RBP23.35■■□□□ 1.33
Ubr3-202ENSMUST00000112251 Ythdc1E9Q5K9 736 aaKnown RBP23.34■■□□□ 1.33
Ubr3-202ENSMUST00000112251 ArxO35085 564 aa23.33■■□□□ 1.32
Ubr3-202ENSMUST00000112251 Lmod3E9QA62 571 aa23.31■■□□□ 1.32
Ubr3-202ENSMUST00000112251 Il27Q8K3I6 234 aa23.27■■□□□ 1.32
Ubr3-202ENSMUST00000112251 Pcgf6Q99NA9 353 aa23.15■■□□□ 1.3
Ubr3-202ENSMUST00000112251 Polr3glQ8R0C0 218 aa23.14■■□□□ 1.3
Ubr3-202ENSMUST00000112251 Zbtb7cQ8VCZ7 619 aa23.13■■□□□ 1.29
Ubr3-202ENSMUST00000112251 Gm13697A2AK42 830 aa23.02■■□□□ 1.28
Ubr3-202ENSMUST00000112251 Rtl1Q7M732 1744 aa23.02■■□□□ 1.28
Ubr3-202ENSMUST00000112251 Upf2A2AT37 1269 aaKnown RBP23.01■■□□□ 1.27
Ubr3-202ENSMUST00000112251 Ccdc180J3QNE4 1664 aa23■■□□□ 1.27
Ubr3-202ENSMUST00000112251 Nlrp6Q91WS2 869 aa22.96■■□□□ 1.27
Ubr3-202ENSMUST00000112251 Hsp90aa1P07901 733 aaKnown RBP22.95■■□□□ 1.26
Ubr3-202ENSMUST00000112251 Zbtb4Q5F293 982 aa22.93■■□□□ 1.26
Ubr3-202ENSMUST00000112251 Prdm10Q3UTQ7 1184 aa22.92■■□□□ 1.26
Ubr3-202ENSMUST00000112251 Atp1b4Q99ME6 356 aa22.92■■□□□ 1.26
Ubr3-202ENSMUST00000112251 TonslQ6NZL6 1363 aa22.9■■□□□ 1.26
Ubr3-202ENSMUST00000112251 Anp32aO35381 247 aa22.84■■□□□ 1.25
Ubr3-202ENSMUST00000112251 Hnrnpul2Q00PI9 745 aaKnown RBP22.82■■□□□ 1.24
Ubr3-202ENSMUST00000112251 Rangap1P46061 589 aaKnown RBP22.81■■□□□ 1.24
Ubr3-202ENSMUST00000112251 Supt5hO55201 1082 aaKnown RBP22.75■■□□□ 1.23
Ubr3-202ENSMUST00000112251 Vsig10D3YX43 558 aa22.71■■□□□ 1.23
Ubr3-202ENSMUST00000112251 Erich6D3Z6S9 713 aa22.69■■□□□ 1.22
Ubr3-202ENSMUST00000112251 Csrnp3P59055 597 aa22.68■■□□□ 1.22
Ubr3-202ENSMUST00000112251 DekQ7TNV0 380 aaKnown RBP22.65■■□□□ 1.22
Ubr3-202ENSMUST00000112251 Gm13695A2AK44 830 aa22.62■■□□□ 1.21
Ubr3-202ENSMUST00000112251 Ifnlr1Q8CGK5 535 aa22.6■■□□□ 1.21
Ubr3-202ENSMUST00000112251 Gm38655A0A286YDK6 273 aa22.56■■□□□ 1.2
Ubr3-202ENSMUST00000112251 Plppr3Q7TPB0 716 aa22.5■■□□□ 1.19
Ubr3-202ENSMUST00000112251 Mapk8ip2Q9ERE9 830 aa22.46■■□□□ 1.19
Ubr3-202ENSMUST00000112251 Trim44Q9QXA7 346 aa22.42■■□□□ 1.18
Ubr3-202ENSMUST00000112251 Znf326O88291 580 aa22.41■■□□□ 1.18
Ubr3-202ENSMUST00000112251 Ppp4r2Q0VGB7 417 aa22.27■■□□□ 1.16
Ubr3-202ENSMUST00000112251 Lmod2Q3UHZ5 550 aa22.26■■□□□ 1.15
Ubr3-202ENSMUST00000112251 Mier1Q5UAK0 511 aa22.23■■□□□ 1.15
Ubr3-202ENSMUST00000112251 Znf316Q6PGE4 1016 aa22.23■■□□□ 1.15
Ubr3-202ENSMUST00000112251 PtmaP26350 111 aa22.19■■□□□ 1.14
Ubr3-202ENSMUST00000112251 Fgd1P52734 960 aa22.18■■□□□ 1.14
Ubr3-202ENSMUST00000112251 ClspnQ80YR7 1315 aa22.17■■□□□ 1.14
Ubr3-202ENSMUST00000112251 Rad21Q61550 635 aaKnown RBP22.15■■□□□ 1.14
Ubr3-202ENSMUST00000112251 Arid4bA2CG63 1314 aaKnown RBP22.12■■□□□ 1.13
Ubr3-202ENSMUST00000112251 Clstn1Q9EPL2 979 aa22.09■■□□□ 1.13
Ubr3-202ENSMUST00000112251 Trim26Q99PN3 545 aa22.06■■□□□ 1.12
Ubr3-202ENSMUST00000112251 Irx6Q9ER75 438 aa22.05■■□□□ 1.12
Ubr3-202ENSMUST00000112251 Plekhg3Q4VAC9 1341 aa22.04■■□□□ 1.12
Ubr3-202ENSMUST00000112251 Calr4Q3TQS0 420 aa22.02■■□□□ 1.12
Ubr3-202ENSMUST00000112251 PnnO35691 725 aaKnown RBP21.97■■□□□ 1.11
Ubr3-202ENSMUST00000112251 Hsp90ab1P11499 724 aaKnown RBP21.96■■□□□ 1.11
Ubr3-202ENSMUST00000112251 Hdac5Q9Z2V6 1113 aa21.95■■□□□ 1.1
Ubr3-202ENSMUST00000112251 BccipQ9CWI3 316 aa21.94■■□□□ 1.1
Ubr3-202ENSMUST00000112251 Slc4a1apE9PX68 744 aa21.94■■□□□ 1.1
Ubr3-202ENSMUST00000112251 Prm3Q62100 101 aa21.91■■□□□ 1.1
Ubr3-202ENSMUST00000112251 Plcb2A3KGF7 1181 aa21.84■■□□□ 1.09
Ubr3-202ENSMUST00000112251 Mak16Q8BGS0 296 aaKnown RBP21.84■■□□□ 1.09
Ubr3-202ENSMUST00000112251 Rtn4Q99P72 1162 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms