RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Hsp90ab1P11499 724 aaKnown RBP10.74□□□□□ -0.69
Scn8a-204ENSMUST00000108909 Trim44Q9QXA7 346 aa10.74□□□□□ -0.69
Scn8a-204ENSMUST00000108909 Arid4bA2CG63 1314 aaKnown RBP10.72□□□□□ -0.69
Scn8a-204ENSMUST00000108909 Trim30dE9PWL0 497 aa10.7□□□□□ -0.7
Scn8a-204ENSMUST00000108909 Ccer2J3QPU5 274 aa10.64□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Slc4a3P16283 1227 aa10.63□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Spryd3E9Q9B3 442 aa10.63□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Plcb2A3KGF7 1181 aa10.63□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Rb1cc1Q9ESK9 1588 aa10.63□□□□□ -0.71
Scn8a-204ENSMUST00000108909 PtmaP26350 111 aa10.62□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Abcc8B2RUS7 1588 aa10.62□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Ofd1Q80Z25 1017 aa10.62□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Htatsf1Q8BGC0 757 aa10.62□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Taok2Q6ZQ29 1240 aa10.6□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Trim26Q99PN3 545 aa10.6□□□□□ -0.71
Scn8a-204ENSMUST00000108909 Chic2Q9D9G3 165 aa10.59□□□□□ -0.71
Scn8a-204ENSMUST00000108909 PrkcshO08795 521 aa10.58□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Tnnt2P50752 301 aa10.58□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Dbr1Q923B1 550 aa10.58□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Brd4Q9ESU6 1400 aaKnown RBP10.58□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Gtf3c3Q3TMP1 882 aa10.57□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Atp1b4Q99ME6 356 aa10.57□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Supt16hQ920B9 1047 aa10.56□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Dnttip2Q8R2M2 758 aaKnown RBP10.56□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Apbb1Q9QXJ1 710 aa10.55□□□□□ -0.72
Scn8a-204ENSMUST00000108909 AU015836B2RUM3 263 aa10.55□□□□□ -0.72
Scn8a-204ENSMUST00000108909 B4galnt3Q6L8S8 986 aa10.55□□□□□ -0.72
Scn8a-204ENSMUST00000108909 BlmO88700 1416 aa10.54□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Ppm1gQ61074 542 aa10.53□□□□□ -0.72
Scn8a-204ENSMUST00000108909 Pknox2Q8BG99 474 aa10.51□□□□□ -0.73
Scn8a-204ENSMUST00000108909 Npm1Q61937 292 aaKnown RBP10.5□□□□□ -0.73
Scn8a-204ENSMUST00000108909 Znf316Q6PGE4 1016 aa10.49□□□□□ -0.73
Scn8a-204ENSMUST00000108909 Rgl3Q3UYI5 709 aa10.48□□□□□ -0.73
Scn8a-204ENSMUST00000108909 Hdac5Q9Z2V6 1113 aa10.48□□□□□ -0.73
Scn8a-204ENSMUST00000108909 Gm13697A2AK42 830 aa10.47□□□□□ -0.73
Scn8a-204ENSMUST00000108909 Armcx1Q9CX83 456 aa10.46□□□□□ -0.73
Scn8a-204ENSMUST00000108909 Ifnlr1Q8CGK5 535 aa10.45□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Tcerg1Q8CGF7 1100 aaKnown RBP10.45□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Ipo9Q91YE6 1041 aa10.45□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Erich6bQ9D4S6 220 aa10.44□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Fgd1P52734 960 aa10.44□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Setd5Q5XJV7 1441 aa10.42□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Dnai1Q8C0M8 701 aa10.41□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Adam1bQ8R534 806 aa10.41□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Neurod2Q62414 383 aa10.4□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Nolc1E9Q5C9 702 aaKnown RBP10.4□□□□□ -0.74
Scn8a-204ENSMUST00000108909 Fkbp15Q6P9Q6 1216 aaKnown RBP10.4□□□□□ -0.75
Scn8a-204ENSMUST00000108909 Wwc2Q6NXJ0 1187 aa10.39□□□□□ -0.75
Scn8a-204ENSMUST00000108909 ChgaP26339 463 aaKnown RBP10.39□□□□□ -0.75
Scn8a-204ENSMUST00000108909 Rrp12Q6P5B0 1295 aaKnown RBP10.36□□□□□ -0.75
Scn8a-204ENSMUST00000108909 Grwd1Q810D6 446 aaKnown RBP10.36□□□□□ -0.75
Scn8a-204ENSMUST00000108909 Gm13695A2AK44 830 aa10.36□□□□□ -0.75
Scn8a-204ENSMUST00000108909 MsnP26041 577 aaKnown RBP10.36□□□□□ -0.75
Scn8a-204ENSMUST00000108909 Rtn4Q99P72 1162 aaKnown RBP10.36□□□□□ -0.75
Scn8a-204ENSMUST00000108909 Casc1Q6TDU8 730 aa10.35□□□□□ -0.75
Scn8a-204ENSMUST00000108909 Plcd4Q8K3R3 807 aa10.35□□□□□ -0.75
Scn8a-204ENSMUST00000108909 Chmp5Q9D7S9 219 aa10.33□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Map7O88735 730 aa10.33□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Hspa5P20029 655 aaKnown RBP10.32□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Card11Q8CIS0 1159 aa10.32□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Rsf1E9PWW9 1441 aaKnown RBP10.32□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Cwc22Q8C5N3 908 aaKnown RBP10.31□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Rwdd1Q9CQK7 243 aa10.31□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Mbd3Q9Z2D8 285 aaKnown RBP10.3□□□□□ -0.76
Scn8a-204ENSMUST00000108909 EspnQ9ET47 871 aa10.29□□□□□ -0.76
Scn8a-204ENSMUST00000108909 SlkO54988 1233 aa10.29□□□□□ -0.76
Scn8a-204ENSMUST00000108909 IbspQ61711 324 aa10.29□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Q8BT18 775 aa10.29□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Irx6Q9ER75 438 aa10.29□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Eea1Q8BL66 1411 aa10.29□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Exoc6Q8R313 802 aa10.28□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Kdm2aP59997 1161 aa10.28□□□□□ -0.76
Scn8a-204ENSMUST00000108909 Golga3P55937 1487 aa10.27□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Gm6268A2A3U9 297 aa10.26□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Sin3aQ60520 1274 aaKnown RBP10.26□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Gpatch11Q3UFS4 262 aa10.25□□□□□ -0.77
Scn8a-204ENSMUST00000108909 VgfQ0VGU4 617 aa10.24□□□□□ -0.77
Scn8a-204ENSMUST00000108909 KnstrnQ9D9Z1 312 aaKnown RBP10.24□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Fbxo2Q80UW2 297 aa10.24□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Hsp90b1P08113 802 aaKnown RBP10.23□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Baz1aO88379 1555 aa10.23□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Kiaa0754Q69ZZ9 979 aa10.23□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Clstn2Q9ER65 966 aa10.23□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Pcmtd1P59913 357 aa10.22□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Ipo8Q7TMY7 1010 aa10.22□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Ddrgk1Q80WW9 315 aa10.21□□□□□ -0.77
Scn8a-204ENSMUST00000108909 PnnO35691 725 aaKnown RBP10.21□□□□□ -0.77
Scn8a-204ENSMUST00000108909 Calcoco2A2A6M5 331 aa10.21□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Mfap1aC0HKD8 439 aaKnown RBP10.21□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Mfap1bC0HKD9 439 aaKnown RBP10.21□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Sart3Q9JLI8 962 aaKnown RBP10.2□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Becn1O88597 448 aa10.2□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Mak16Q8BGS0 296 aaKnown RBP10.2□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Mapk8ip3Q9ESN9 1337 aa10.2□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Znf326O88291 580 aa10.2□□□□□ -0.78
Scn8a-204ENSMUST00000108909 GorabQ8BRM2 368 aa10.19□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Ush1cQ9ES64 910 aa10.19□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Podxl2Q8CAE9 603 aa10.19□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Mia2Q91ZV0 1396 aa10.19□□□□□ -0.78
Scn8a-204ENSMUST00000108909 Pdcl3Q8BVF2 240 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 1442.5 ms