RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Urb2E9Q7L1 1524 aaKnown RBP22.59■■□□□ 1.21
Nup88-202ENSMUST00000108530 Arhgef5E9Q7D5 1581 aa22.56■■□□□ 1.2
Nup88-202ENSMUST00000108530 Pla2r1Q62028 1487 aa22.51■■□□□ 1.19
Nup88-202ENSMUST00000108530 Erich3F6QRE9 1637 aa22.51■■□□□ 1.19
Nup88-202ENSMUST00000108530 Magi3Q9EQJ9 1476 aa22.5■■□□□ 1.19
Nup88-202ENSMUST00000108530 Disp1Q3TDN0 1521 aa22.5■■□□□ 1.19
Nup88-202ENSMUST00000108530 Pcf11G3X9Z4 1553 aa22.48■■□□□ 1.19
Nup88-202ENSMUST00000108530 Grin2aP35436 1464 aa22.46■■□□□ 1.19
Nup88-202ENSMUST00000108530 Lrriq1Q0P5X1 1673 aa22.46■■□□□ 1.19
Nup88-202ENSMUST00000108530 EprsQ8CGC7 1512 aaKnown RBP22.42■■□□□ 1.18
Nup88-202ENSMUST00000108530 Fyco1Q8VDC1 1437 aa22.42■■□□□ 1.18
Nup88-202ENSMUST00000108530 Tiam1Q60610 1591 aa22.42■■□□□ 1.18
Nup88-202ENSMUST00000108530 Naip1Q9QWK5 1403 aa22.41■■□□□ 1.18
Nup88-202ENSMUST00000108530 Lmo7E9PYF4 1699 aaKnown RBP22.41■■□□□ 1.18
Nup88-202ENSMUST00000108530 Setd1bQ8CFT2 1985 aa22.39■■□□□ 1.18
Nup88-202ENSMUST00000108530 Lmod2Q3UHZ5 550 aa22.39■■□□□ 1.18
Nup88-202ENSMUST00000108530 BlmO88700 1416 aa22.39■■□□□ 1.17
Nup88-202ENSMUST00000108530 Polr1aO35134 1717 aaKnown RBP22.38■■□□□ 1.17
Nup88-202ENSMUST00000108530 Slx4Q6P1D7 1565 aa22.37■■□□□ 1.17
Nup88-202ENSMUST00000108530 Ift140E9PY46 1464 aa22.36■■□□□ 1.17
Nup88-202ENSMUST00000108530 Aebp1Q640N1 1128 aa22.35■■□□□ 1.17
Nup88-202ENSMUST00000108530 CadpsQ80TJ1 1355 aa22.33■■□□□ 1.16
Nup88-202ENSMUST00000108530 Rpap1Q80TE0 1409 aa22.31■■□□□ 1.16
Nup88-202ENSMUST00000108530 WizO88286 1684 aaKnown RBP22.3■■□□□ 1.16
Nup88-202ENSMUST00000108530 CntlnA2AM05 1397 aa22.3■■□□□ 1.16
Nup88-202ENSMUST00000108530 Nup160Q9Z0W3 1402 aaKnown RBP22.29■■□□□ 1.16
Nup88-202ENSMUST00000108530 Gm7298A0A0N4SVU1 1476 aa22.28■■□□□ 1.16
Nup88-202ENSMUST00000108530 NefmP08553 848 aa22.27■■□□□ 1.16
Nup88-202ENSMUST00000108530 Ncapd3Q6ZQK0 1506 aa22.27■■□□□ 1.16
Nup88-202ENSMUST00000108530 PxdnQ3UQ28 1475 aa22.26■■□□□ 1.15
Nup88-202ENSMUST00000108530 Adamts12Q811B3 1600 aa22.24■■□□□ 1.15
Nup88-202ENSMUST00000108530 Abca5Q8K448 1642 aa22.22■■□□□ 1.15
Nup88-202ENSMUST00000108530 Gpatch8A2A6A1 1505 aa22.21■■□□□ 1.15
Nup88-202ENSMUST00000108530 Pbrm1Q8BSQ9 1634 aaKnown RBP22.2■■□□□ 1.14
Nup88-202ENSMUST00000108530 Abca16E9PWJ7 1678 aa22.17■■□□□ 1.14
Nup88-202ENSMUST00000108530 TchhA0A0B4J1F9 1599 aa22.16■■□□□ 1.14
Nup88-202ENSMUST00000108530 Arhgap27A2AB59 869 aa22.16■■□□□ 1.14
Nup88-202ENSMUST00000108530 Gm1043A0A140LJC2 1431 aa22.16■■□□□ 1.14
Nup88-202ENSMUST00000108530 Cc2d2bA0A286YDU8 1405 aa22.15■■□□□ 1.14
Nup88-202ENSMUST00000108530 Soga1E1U8D0 1418 aa22.14■■□□□ 1.14
Nup88-202ENSMUST00000108530 Peg3Q3URU2 1571 aa22.13■■□□□ 1.13
Nup88-202ENSMUST00000108530 Kif27Q7M6Z4 1394 aa22.1■■□□□ 1.13
Nup88-202ENSMUST00000108530 WrnO09053 1401 aa22.09■■□□□ 1.13
Nup88-202ENSMUST00000108530 Pcgf6Q99NA9 353 aa22.09■■□□□ 1.13
Nup88-202ENSMUST00000108530 Rusc2Q80U22 1514 aa22.07■■□□□ 1.12
Nup88-202ENSMUST00000108530 Abcc2Q8VI47 1543 aa22.06■■□□□ 1.12
Nup88-202ENSMUST00000108530 Eif4g3Q80XI3 1579 aaKnown RBP22.05■■□□□ 1.12
Nup88-202ENSMUST00000108530 3425401B19RikD3Z1D3 1412 aa22.04■■□□□ 1.12
Nup88-202ENSMUST00000108530 Fam50aQ9WV03 339 aaKnown RBP22.04■■□□□ 1.12
Nup88-202ENSMUST00000108530 Shroom2A2ALU4 1481 aa21.98■■□□□ 1.11
Nup88-202ENSMUST00000108530 Ccnb3Q810T2 1396 aa21.96■■□□□ 1.11
Nup88-202ENSMUST00000108530 BC005561E9Q5E2 1589 aa21.95■■□□□ 1.1
Nup88-202ENSMUST00000108530 Kdm5bQ80Y84 1544 aa21.94■■□□□ 1.1
Nup88-202ENSMUST00000108530 NexmifQ5DTT1 1515 aa21.91■■□□□ 1.1
Nup88-202ENSMUST00000108530 Eid3Q3V124 375 aa21.9■■□□□ 1.1
Nup88-202ENSMUST00000108530 Ncoa3O09000 1398 aa21.88■■□□□ 1.09
Nup88-202ENSMUST00000108530 Lmtk2Q3TYD6 1471 aa21.88■■□□□ 1.09
Nup88-202ENSMUST00000108530 Supt5hO55201 1082 aaKnown RBP21.87■■□□□ 1.09
Nup88-202ENSMUST00000108530 Rapgef6Q5NCJ1 1609 aa21.87■■□□□ 1.09
Nup88-202ENSMUST00000108530 AknaQ80VW7 1404 aa21.86■■□□□ 1.09
Nup88-202ENSMUST00000108530 Neo1P97798 1493 aa21.85■■□□□ 1.09
Nup88-202ENSMUST00000108530 Arhgap31A6X8Z5 1425 aa21.85■■□□□ 1.09
Nup88-202ENSMUST00000108530 Fkbp15Q6P9Q6 1216 aaKnown RBP21.84■■□□□ 1.09
Nup88-202ENSMUST00000108530 Mug1P28665 1476 aa21.84■■□□□ 1.09
Nup88-202ENSMUST00000108530 Map3k4O08648 1597 aa21.84■■□□□ 1.09
Nup88-202ENSMUST00000108530 Dnmt1P13864 1620 aaKnown RBP21.83■■□□□ 1.09
Nup88-202ENSMUST00000108530 A2mQ6GQT1 1474 aa21.83■■□□□ 1.08
Nup88-202ENSMUST00000108530 Chic2Q9D9G3 165 aa21.82■■□□□ 1.08
Nup88-202ENSMUST00000108530 TonslQ6NZL6 1363 aa21.8■■□□□ 1.08
Nup88-202ENSMUST00000108530 Fgd6Q69ZL1 1399 aa21.8■■□□□ 1.08
Nup88-202ENSMUST00000108530 Las1lA2BE28 776 aaKnown RBP21.79■■□□□ 1.08
Nup88-202ENSMUST00000108530 Naip2Q9QUK4 1447 aa21.78■■□□□ 1.08
Nup88-202ENSMUST00000108530 Arhgef11Q68FM7 1552 aa21.77■■□□□ 1.08
Nup88-202ENSMUST00000108530 Zcchc11B2RX14 1644 aaKnown RBP21.77■■□□□ 1.08
Nup88-202ENSMUST00000108530 Gcc2Q8CHG3 1679 aa21.76■■□□□ 1.07
Nup88-202ENSMUST00000108530 Jph4Q80WT0 628 aa21.76■■□□□ 1.07
Nup88-202ENSMUST00000108530 Ccdc141E9Q8Q6 1531 aa21.73■■□□□ 1.07
Nup88-202ENSMUST00000108530 Mia2Q91ZV0 1396 aa21.72■■□□□ 1.07
Nup88-202ENSMUST00000108530 Mroh2aD3Z750 1679 aa21.71■■□□□ 1.07
Nup88-202ENSMUST00000108530 Fhad1A6PWD2 1420 aa21.71■■□□□ 1.07
Nup88-202ENSMUST00000108530 Arhgef12Q8R4H2 1543 aaKnown RBP21.71■■□□□ 1.07
Nup88-202ENSMUST00000108530 Cdc42bpaQ3UU96 1719 aa21.69■■□□□ 1.06
Nup88-202ENSMUST00000108530 Magi1Q6RHR9 1471 aa21.69■■□□□ 1.06
Nup88-202ENSMUST00000108530 Arhgef40Q3UPH7 1517 aa21.68■■□□□ 1.06
Nup88-202ENSMUST00000108530 Ncoa2Q61026 1462 aa21.68■■□□□ 1.06
Nup88-202ENSMUST00000108530 Aebp2Q9Z248 504 aaKnown RBP21.68■■□□□ 1.06
Nup88-202ENSMUST00000108530 Vps8Q0P5W1 1427 aa21.67■■□□□ 1.06
Nup88-202ENSMUST00000108530 Ube2uB1AUC4 352 aa21.66■■□□□ 1.06
Nup88-202ENSMUST00000108530 Kiaa1551Q5DTW7 1521 aa21.66■■□□□ 1.06
Nup88-202ENSMUST00000108530 Prex2Q3LAC4 1598 aa21.65■■□□□ 1.06
Nup88-202ENSMUST00000108530 Cabp1Q9JLK7 227 aa21.64■■□□□ 1.05
Nup88-202ENSMUST00000108530 Kdm6bQ5NCY0 1641 aa21.62■■□□□ 1.05
Nup88-202ENSMUST00000108530 Wdr66E9Q743 1299 aa21.62■■□□□ 1.05
Nup88-202ENSMUST00000108530 Gm14025A2AP89 1413 aa21.61■■□□□ 1.05
Nup88-202ENSMUST00000108530 Abcc5Q9R1X5 1436 aa21.61■■□□□ 1.05
Nup88-202ENSMUST00000108530 Adcy10Q8C0T9 1614 aa21.61■■□□□ 1.05
Nup88-202ENSMUST00000108530 Fam163aQ8CAA5 168 aa21.6■■□□□ 1.05
Nup88-202ENSMUST00000108530 Sall2Q9QX96 1004 aa21.6■■□□□ 1.05
Nup88-202ENSMUST00000108530 Dennd4bQ3U1Y4 1499 aa21.6■■□□□ 1.05
Nup88-202ENSMUST00000108530 Dhx57Q6P5D3 1388 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms