RNA–Protein interactions for RNA: ENSMUST00000068156.7

Vps13a-201, Transcript of Vacuolar protein sorting-associated protein 13A, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Vps13a, Length 10,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13a-201ENSMUST00000068156 ScribQ80U72 1612 aa9.78□□□□□ -0.84
Vps13a-201ENSMUST00000068156 Smarca2Q6DIC0 1577 aa9.78□□□□□ -0.84
Vps13a-201ENSMUST00000068156 4933416C03RikQ3V063 378 aa9.76□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Mia2Q91ZV0 1396 aa9.76□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Upf2A2AT37 1269 aaKnown RBP9.75□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Prdm10Q3UTQ7 1184 aa9.75□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Aebp2Q9Z248 504 aaKnown RBP9.75□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Ttbk1Q6PCN3 1308 aa9.74□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Atad2bE9Q166 1460 aaKnown RBP9.74□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Mrs2Q5NCE8 434 aa9.74□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Phldb1Q6PDH0 1371 aaKnown RBP9.73□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Aebp1Q640N1 1128 aa9.73□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Rgl3Q3UYI5 709 aa9.73□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Cux2P70298 1426 aa9.72□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Kif27Q7M6Z4 1394 aa9.72□□□□□ -0.85
Vps13a-201ENSMUST00000068156 Mtus2Q3UHD3 1353 aa9.69□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Rrp7aQ9D1C9 280 aaKnown RBP9.69□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Synj1Q8CHC4 1574 aa9.68□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Mroh3A0A1D5RM54 893 aa9.68□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Cwc22Q8C5N3 908 aaKnown RBP9.67□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Calr4Q3TQS0 420 aa9.67□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Aplp2Q06335 707 aa9.67□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Polr3glQ8R0C0 218 aa9.67□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Csrnp3P59055 597 aa9.67□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Card11Q8CIS0 1159 aa9.66□□□□□ -0.86
Vps13a-201ENSMUST00000068156 CntlnA2AM05 1397 aa9.66□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Grwd1Q810D6 446 aaKnown RBP9.66□□□□□ -0.86
Vps13a-201ENSMUST00000068156 Plppr3Q7TPB0 716 aa9.64□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Baz1bQ9Z277 1479 aa9.63□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Fyco1Q8VDC1 1437 aa9.63□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Smarca4Q3TKT4 1613 aaKnown RBP9.63□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Rad21Q61550 635 aaKnown RBP9.62□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Gm20521D3Z5F7 333 aa9.62□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Srpk2O54781 681 aaKnown RBP9.62□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Ppp4r2Q0VGB7 417 aa9.62□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Safb2Q80YR5 991 aaKnown RBP9.62□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Carmil1Q6EDY6 1374 aa9.61□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Rapgef2Q8CHG7 1496 aa9.61□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Hspa5P20029 655 aaKnown RBP9.61□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Kdm2aP59997 1161 aa9.61□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Rpap1Q80TE0 1409 aa9.6□□□□□ -0.87
Vps13a-201ENSMUST00000068156 LrpprcQ6PB66 1392 aaKnown RBP9.6□□□□□ -0.87
Vps13a-201ENSMUST00000068156 IqubQ8CDK3 788 aa9.6□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Wdr43Q6ZQL4 677 aaKnown RBP9.59□□□□□ -0.87
Vps13a-201ENSMUST00000068156 Map4P27546 1125 aaKnown RBP9.59□□□□□ -0.87
Vps13a-201ENSMUST00000068156 P3h3Q8CG70 732 aa9.58□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Gm38655A0A286YDK6 273 aa9.58□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Cabp1Q9JLK7 227 aa9.58□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Pkd2O35245 966 aa9.57□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Ofd1Q80Z25 1017 aa9.57□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Mphosph9A6H5Y1 991 aa9.57□□□□□ -0.88
Vps13a-201ENSMUST00000068156 AknaQ80VW7 1404 aa9.56□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Arhgap35Q91YM2 1499 aa9.56□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Dhx57Q6P5D3 1388 aaKnown RBP9.55□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Cttnbp2B9EJA2 1648 aa9.55□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Stk24Q99KH8 431 aa9.55□□□□□ -0.88
Vps13a-201ENSMUST00000068156 Iqgap2Q3UQ44 1575 aa9.52□□□□□ -0.89
Vps13a-201ENSMUST00000068156 DaxxO35613 739 aa9.52□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Dhx29Q6PGC1 1365 aaKnown RBP9.51□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Rundc1Q0VDN7 615 aa9.51□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Rangap1P46061 589 aaKnown RBP9.51□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Lemd3Q9WU40 921 aa9.5□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Trak1Q6PD31 939 aa9.49□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Exosc9Q9JHI7 438 aaKnown RBP9.49□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Stag3O70576 1240 aa9.48□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Ccnb3Q810T2 1396 aa9.48□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Efcab5A0JP43 1406 aa9.48□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Arid3cA6PWV5 409 aa9.47□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Wwc2Q6NXJ0 1187 aa9.47□□□□□ -0.89
Vps13a-201ENSMUST00000068156 UacaQ8CGB3 1411 aa9.47□□□□□ -0.89
Vps13a-201ENSMUST00000068156 Sin3aQ60520 1274 aaKnown RBP9.46□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Ppp1r18Q8BQ30 594 aa9.45□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Fgd1P52734 960 aa9.45□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Ifit1bl1D3Z6F0 470 aa9.44□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Plekhh2Q8C115 1491 aa9.44□□□□□ -0.9
Vps13a-201ENSMUST00000068156 ArxO35085 564 aa9.44□□□□□ -0.9
Vps13a-201ENSMUST00000068156 4930567H17RikQ3V0K5 233 aa9.44□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Mapk8ip3Q9ESN9 1337 aa9.44□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Trim26Q99PN3 545 aa9.43□□□□□ -0.9
Vps13a-201ENSMUST00000068156 WrnO09053 1401 aa9.43□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Neurod2Q62414 383 aa9.42□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Nup155Q99P88 1391 aaKnown RBP9.42□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Zfp777B9EKF4 885 aa9.42□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Kif3bQ61771 747 aa9.42□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Sart1Q9Z315 806 aaKnown RBP9.42□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Shroom4Q1W617 1475 aa9.42□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Gtf2e1Q9D0D5 440 aa9.42□□□□□ -0.9
Vps13a-201ENSMUST00000068156 DiexfQ8BTT6 772 aaKnown RBP9.41□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Fhad1A6PWD2 1420 aa9.41□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Jph4Q80WT0 628 aa9.4□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Rsph4aQ8BYM7 716 aa9.4□□□□□ -0.9
Vps13a-201ENSMUST00000068156 Exoc6Q8R313 802 aa9.4□□□□□ -0.91
Vps13a-201ENSMUST00000068156 1700123L14RikQ3V2K7 440 aa9.39□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Top2aQ01320 1528 aaKnown RBP9.39□□□□□ -0.91
Vps13a-201ENSMUST00000068156 NrkQ9R0G8 1455 aa9.39□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Zscan21Q07231 555 aa9.38□□□□□ -0.91
Vps13a-201ENSMUST00000068156 MyclP10166 368 aa9.38□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Arid4bA2CG63 1314 aaKnown RBP9.37□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Cnga1P29974 684 aa9.37□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Srcin1Q9QWI6 1250 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms