RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Erich3F6QRE9 1637 aa24.07■■□□□ 1.44
Trim50-201ENSMUST00000065785 Carmil1Q6EDY6 1374 aa24.05■■□□□ 1.44
Trim50-201ENSMUST00000065785 Zeb1Q64318 1117 aa24.05■■□□□ 1.44
Trim50-201ENSMUST00000065785 Pbrm1Q8BSQ9 1634 aaKnown RBP24.04■■□□□ 1.44
Trim50-201ENSMUST00000065785 Ankrd26Q811D2 1581 aa24.01■■□□□ 1.43
Trim50-201ENSMUST00000065785 Rusc2Q80U22 1514 aa24■■□□□ 1.43
Trim50-201ENSMUST00000065785 Rad54l2Q99NG0 1466 aa24■■□□□ 1.43
Trim50-201ENSMUST00000065785 Nup160Q9Z0W3 1402 aaKnown RBP23.98■■□□□ 1.43
Trim50-201ENSMUST00000065785 SynmQ70IV5 1561 aa23.98■■□□□ 1.43
Trim50-201ENSMUST00000065785 Magi3Q9EQJ9 1476 aa23.97■■□□□ 1.43
Trim50-201ENSMUST00000065785 Plekhg3Q4VAC9 1341 aa23.97■■□□□ 1.43
Trim50-201ENSMUST00000065785 Tiam1Q60610 1591 aa23.94■■□□□ 1.42
Trim50-201ENSMUST00000065785 Grin2aP35436 1464 aa23.93■■□□□ 1.42
Trim50-201ENSMUST00000065785 Ncapd3Q6ZQK0 1506 aa23.92■■□□□ 1.42
Trim50-201ENSMUST00000065785 Gpatch8A2A6A1 1505 aa23.9■■□□□ 1.42
Trim50-201ENSMUST00000065785 Cc2d2bA0A286YDU8 1405 aa23.88■■□□□ 1.41
Trim50-201ENSMUST00000065785 Lmo7E9PYF4 1699 aaKnown RBP23.87■■□□□ 1.41
Trim50-201ENSMUST00000065785 Cux1P53564 1515 aa23.87■■□□□ 1.41
Trim50-201ENSMUST00000065785 Pla2r1Q62028 1487 aa23.87■■□□□ 1.41
Trim50-201ENSMUST00000065785 Polr1aO35134 1717 aaKnown RBP23.86■■□□□ 1.41
Trim50-201ENSMUST00000065785 Rpap1Q80TE0 1409 aa23.86■■□□□ 1.41
Trim50-201ENSMUST00000065785 Pcgf6Q99NA9 353 aa23.86■■□□□ 1.41
Trim50-201ENSMUST00000065785 Naip1Q9QWK5 1403 aa23.85■■□□□ 1.41
Trim50-201ENSMUST00000065785 Pcf11G3X9Z4 1553 aa23.84■■□□□ 1.41
Trim50-201ENSMUST00000065785 Fyco1Q8VDC1 1437 aa23.82■■□□□ 1.4
Trim50-201ENSMUST00000065785 CntlnA2AM05 1397 aa23.81■■□□□ 1.4
Trim50-201ENSMUST00000065785 Ap3b1Q9Z1T1 1105 aa23.77■■□□□ 1.4
Trim50-201ENSMUST00000065785 Peg3Q3URU2 1571 aa23.76■■□□□ 1.39
Trim50-201ENSMUST00000065785 Slx4Q6P1D7 1565 aa23.72■■□□□ 1.39
Trim50-201ENSMUST00000065785 BlmO88700 1416 aa23.71■■□□□ 1.39
Trim50-201ENSMUST00000065785 TchhA0A0B4J1F9 1599 aa23.67■■□□□ 1.38
Trim50-201ENSMUST00000065785 Shroom2A2ALU4 1481 aa23.67■■□□□ 1.38
Trim50-201ENSMUST00000065785 EprsQ8CGC7 1512 aaKnown RBP23.66■■□□□ 1.38
Trim50-201ENSMUST00000065785 Adamts12Q811B3 1600 aa23.65■■□□□ 1.38
Trim50-201ENSMUST00000065785 Supt5hO55201 1082 aaKnown RBP23.63■■□□□ 1.37
Trim50-201ENSMUST00000065785 WizO88286 1684 aaKnown RBP23.62■■□□□ 1.37
Trim50-201ENSMUST00000065785 Abca16E9PWJ7 1678 aa23.62■■□□□ 1.37
Trim50-201ENSMUST00000065785 Aebp1Q640N1 1128 aa23.61■■□□□ 1.37
Trim50-201ENSMUST00000065785 Kdm5bQ80Y84 1544 aa23.6■■□□□ 1.37
Trim50-201ENSMUST00000065785 CadpsQ80TJ1 1355 aa23.56■■□□□ 1.36
Trim50-201ENSMUST00000065785 Abca5Q8K448 1642 aa23.56■■□□□ 1.36
Trim50-201ENSMUST00000065785 Gm1043A0A140LJC2 1431 aa23.53■■□□□ 1.36
Trim50-201ENSMUST00000065785 PxdnQ3UQ28 1475 aa23.53■■□□□ 1.36
Trim50-201ENSMUST00000065785 Fgd6Q69ZL1 1399 aa23.53■■□□□ 1.36
Trim50-201ENSMUST00000065785 Abcc2Q8VI47 1543 aa23.53■■□□□ 1.36
Trim50-201ENSMUST00000065785 Las1lA2BE28 776 aaKnown RBP23.52■■□□□ 1.36
Trim50-201ENSMUST00000065785 Gm7298A0A0N4SVU1 1476 aa23.51■■□□□ 1.35
Trim50-201ENSMUST00000065785 Dnmt1P13864 1620 aaKnown RBP23.48■■□□□ 1.35
Trim50-201ENSMUST00000065785 Soga1E1U8D0 1418 aa23.46■■□□□ 1.35
Trim50-201ENSMUST00000065785 Pabpn1Q8CCS6 302 aaKnown RBP23.45■■□□□ 1.34
Trim50-201ENSMUST00000065785 Map3k4O08648 1597 aa23.44■■□□□ 1.34
Trim50-201ENSMUST00000065785 TonslQ6NZL6 1363 aa23.43■■□□□ 1.34
Trim50-201ENSMUST00000065785 3425401B19RikD3Z1D3 1412 aa23.42■■□□□ 1.34
Trim50-201ENSMUST00000065785 Lmod2Q3UHZ5 550 aa23.41■■□□□ 1.34
Trim50-201ENSMUST00000065785 Arhgap27A2AB59 869 aa23.38■■□□□ 1.33
Trim50-201ENSMUST00000065785 BC005561E9Q5E2 1589 aa23.38■■□□□ 1.33
Trim50-201ENSMUST00000065785 Lmtk2Q3TYD6 1471 aa23.38■■□□□ 1.33
Trim50-201ENSMUST00000065785 AknaQ80VW7 1404 aa23.35■■□□□ 1.33
Trim50-201ENSMUST00000065785 Kif27Q7M6Z4 1394 aa23.34■■□□□ 1.33
Trim50-201ENSMUST00000065785 Mia2Q91ZV0 1396 aa23.34■■□□□ 1.33
Trim50-201ENSMUST00000065785 Chd1P40201 1711 aa23.34■■□□□ 1.33
Trim50-201ENSMUST00000065785 Fhad1A6PWD2 1420 aa23.33■■□□□ 1.33
Trim50-201ENSMUST00000065785 Abcc1O35379 1528 aa23.32■■□□□ 1.32
Trim50-201ENSMUST00000065785 Pelp1Q9DBD5 1123 aaKnown RBP23.32■■□□□ 1.32
Trim50-201ENSMUST00000065785 Neo1P97798 1493 aa23.3■■□□□ 1.32
Trim50-201ENSMUST00000065785 Sall2Q9QX96 1004 aa23.29■■□□□ 1.32
Trim50-201ENSMUST00000065785 Vps8Q0P5W1 1427 aa23.26■■□□□ 1.31
Trim50-201ENSMUST00000065785 Naip2Q9QUK4 1447 aa23.26■■□□□ 1.31
Trim50-201ENSMUST00000065785 Ccer2J3QPU5 274 aa23.25■■□□□ 1.31
Trim50-201ENSMUST00000065785 Ccnb3Q810T2 1396 aa23.24■■□□□ 1.31
Trim50-201ENSMUST00000065785 Col17a1Q07563 1470 aa23.23■■□□□ 1.31
Trim50-201ENSMUST00000065785 Gcc2Q8CHG3 1679 aa23.23■■□□□ 1.31
Trim50-201ENSMUST00000065785 WrnO09053 1401 aa23.22■■□□□ 1.31
Trim50-201ENSMUST00000065785 Zcchc11B2RX14 1644 aaKnown RBP23.21■■□□□ 1.31
Trim50-201ENSMUST00000065785 Fam50aQ9WV03 339 aaKnown RBP23.21■■□□□ 1.31
Trim50-201ENSMUST00000065785 Aebp2Q9Z248 504 aaKnown RBP23.2■■□□□ 1.3
Trim50-201ENSMUST00000065785 A2mQ6GQT1 1474 aa23.2■■□□□ 1.3
Trim50-201ENSMUST00000065785 Gm14025A2AP89 1413 aa23.18■■□□□ 1.3
Trim50-201ENSMUST00000065785 Gapvd1Q6PAR5 1458 aa23.18■■□□□ 1.3
Trim50-201ENSMUST00000065785 ClspnQ80YR7 1315 aa23.18■■□□□ 1.3
Trim50-201ENSMUST00000065785 NexmifQ5DTT1 1515 aa23.18■■□□□ 1.3
Trim50-201ENSMUST00000065785 Arhgef12Q8R4H2 1543 aaKnown RBP23.17■■□□□ 1.3
Trim50-201ENSMUST00000065785 Ankrd36D3Z4K0 1415 aa23.17■■□□□ 1.3
Trim50-201ENSMUST00000065785 Rapgef6Q5NCJ1 1609 aa23.15■■□□□ 1.3
Trim50-201ENSMUST00000065785 Cep170Q6A065 1588 aa23.15■■□□□ 1.3
Trim50-201ENSMUST00000065785 Jph4Q80WT0 628 aa23.12■■□□□ 1.29
Trim50-201ENSMUST00000065785 Ythdc2B2RR83 1445 aaKnown RBP23.12■■□□□ 1.29
Trim50-201ENSMUST00000065785 UacaQ8CGB3 1411 aa23.12■■□□□ 1.29
Trim50-201ENSMUST00000065785 Wdr66E9Q743 1299 aa23.12■■□□□ 1.29
Trim50-201ENSMUST00000065785 Mug1P28665 1476 aa23.12■■□□□ 1.29
Trim50-201ENSMUST00000065785 Rrbp1Q99PL5 1605 aaKnown RBP23.12■■□□□ 1.29
Trim50-201ENSMUST00000065785 Dnajc5P60904 198 aa23.09■■□□□ 1.29
Trim50-201ENSMUST00000065785 Eid3Q3V124 375 aa23.09■■□□□ 1.29
Trim50-201ENSMUST00000065785 PtprtQ99M80 1454 aa23.08■■□□□ 1.28
Trim50-201ENSMUST00000065785 Ncoa3O09000 1398 aa23.07■■□□□ 1.28
Trim50-201ENSMUST00000065785 Arhgef11Q68FM7 1552 aa23.05■■□□□ 1.28
Trim50-201ENSMUST00000065785 Rfx7F8VPJ6 1459 aa23.04■■□□□ 1.28
Trim50-201ENSMUST00000065785 Fhod3Q76LL6 1578 aa23.04■■□□□ 1.28
Trim50-201ENSMUST00000065785 Dennd4bQ3U1Y4 1499 aa23.01■■□□□ 1.27
Trim50-201ENSMUST00000065785 Kiaa1551Q5DTW7 1521 aa23.01■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms