RNA–Protein interactions for RNA: ENSMUST00000056931.13

Ldb1-202, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldb1, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-202ENSMUST00000056931 Setd5Q5XJV7 1441 aa30.56■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Grin2aP35436 1464 aa30.55■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Setd1bQ8CFT2 1985 aa30.55■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Ankrd26Q811D2 1581 aa30.55■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Cux1P53564 1515 aa30.55■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Ift140E9PY46 1464 aa30.53■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Arap1Q4LDD4 1452 aa30.53■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Ap3b1Q9Z1T1 1105 aa30.53■■■□□ 2.48
Ldb1-202ENSMUST00000056931 Mier1Q5UAK0 511 aa30.48■■■□□ 2.47
Ldb1-202ENSMUST00000056931 Plekhg3Q4VAC9 1341 aa30.43■■■□□ 2.46
Ldb1-202ENSMUST00000056931 Erich3F6QRE9 1637 aa30.43■■■□□ 2.46
Ldb1-202ENSMUST00000056931 EprsQ8CGC7 1512 aaKnown RBP30.41■■■□□ 2.46
Ldb1-202ENSMUST00000056931 Nup160Q9Z0W3 1402 aaKnown RBP30.4■■■□□ 2.46
Ldb1-202ENSMUST00000056931 Arhgef5E9Q7D5 1581 aa30.37■■■□□ 2.45
Ldb1-202ENSMUST00000056931 Polr1aO35134 1717 aaKnown RBP30.36■■■□□ 2.45
Ldb1-202ENSMUST00000056931 Pbrm1Q8BSQ9 1634 aaKnown RBP30.35■■■□□ 2.45
Ldb1-202ENSMUST00000056931 Fyco1Q8VDC1 1437 aa30.32■■■□□ 2.44
Ldb1-202ENSMUST00000056931 Pcf11G3X9Z4 1553 aa30.32■■■□□ 2.44
Ldb1-202ENSMUST00000056931 UbtfP25976 765 aaKnown RBP30.31■■■□□ 2.44
Ldb1-202ENSMUST00000056931 WizO88286 1684 aaKnown RBP30.3■■■□□ 2.44
Ldb1-202ENSMUST00000056931 Lmo7E9PYF4 1699 aaKnown RBP30.29■■■□□ 2.44
Ldb1-202ENSMUST00000056931 Eif4g3Q80XI3 1579 aaKnown RBP30.27■■■□□ 2.44
Ldb1-202ENSMUST00000056931 CadpsQ80TJ1 1355 aa30.26■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Adamts12Q811B3 1600 aa30.25■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Rpap1Q80TE0 1409 aa30.23■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Gpatch8A2A6A1 1505 aa30.23■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Neurod1Q60867 357 aa30.22■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Cc2d2bA0A286YDU8 1405 aa30.21■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Gm7298A0A0N4SVU1 1476 aa30.21■■■□□ 2.43
Ldb1-202ENSMUST00000056931 PxdnQ3UQ28 1475 aa30.21■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Rusc2Q80U22 1514 aa30.2■■■□□ 2.43
Ldb1-202ENSMUST00000056931 Tiam1Q60610 1591 aa30.18■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Abca16E9PWJ7 1678 aa30.17■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Abca5Q8K448 1642 aa30.16■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Naip1Q9QWK5 1403 aa30.16■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Aebp1Q640N1 1128 aa30.15■■■□□ 2.42
Ldb1-202ENSMUST00000056931 TchhA0A0B4J1F9 1599 aa30.15■■■□□ 2.42
Ldb1-202ENSMUST00000056931 Slx4Q6P1D7 1565 aa30.14■■■□□ 2.42
Ldb1-202ENSMUST00000056931 BlmO88700 1416 aa30.06■■■□□ 2.4
Ldb1-202ENSMUST00000056931 CntlnA2AM05 1397 aa30.06■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Soga1E1U8D0 1418 aa30.06■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Sall2Q9QX96 1004 aa30.04■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Arhgap27A2AB59 869 aa30.03■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Lmod2Q3UHZ5 550 aa30.03■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Abcc2Q8VI47 1543 aa30.03■■■□□ 2.4
Ldb1-202ENSMUST00000056931 Peg3Q3URU2 1571 aa29.93■■■□□ 2.38
Ldb1-202ENSMUST00000056931 WrnO09053 1401 aa29.92■■■□□ 2.38
Ldb1-202ENSMUST00000056931 Gm1043A0A140LJC2 1431 aa29.89■■■□□ 2.38
Ldb1-202ENSMUST00000056931 Las1lA2BE28 776 aaKnown RBP29.88■■■□□ 2.37
Ldb1-202ENSMUST00000056931 Shroom2A2ALU4 1481 aa29.87■■■□□ 2.37
Ldb1-202ENSMUST00000056931 Kif27Q7M6Z4 1394 aa29.86■■■□□ 2.37
Ldb1-202ENSMUST00000056931 Dnmt1P13864 1620 aaKnown RBP29.79■■■□□ 2.36
Ldb1-202ENSMUST00000056931 Ncapd3Q6ZQK0 1506 aa29.79■■■□□ 2.36
Ldb1-202ENSMUST00000056931 BC005561E9Q5E2 1589 aa29.78■■■□□ 2.36
Ldb1-202ENSMUST00000056931 Map3k4O08648 1597 aa29.78■■■□□ 2.36
Ldb1-202ENSMUST00000056931 Fgd6Q69ZL1 1399 aa29.74■■■□□ 2.35
Ldb1-202ENSMUST00000056931 AknaQ80VW7 1404 aa29.73■■■□□ 2.35
Ldb1-202ENSMUST00000056931 Neo1P97798 1493 aa29.72■■■□□ 2.35
Ldb1-202ENSMUST00000056931 Rapgef6Q5NCJ1 1609 aa29.66■■■□□ 2.34
Ldb1-202ENSMUST00000056931 Anks4bQ8K3X6 423 aa29.65■■■□□ 2.34
Ldb1-202ENSMUST00000056931 Zcchc11B2RX14 1644 aaKnown RBP29.65■■■□□ 2.34
Ldb1-202ENSMUST00000056931 3425401B19RikD3Z1D3 1412 aa29.62■■■□□ 2.33
Ldb1-202ENSMUST00000056931 Arhgap31A6X8Z5 1425 aa29.61■■■□□ 2.33
Ldb1-202ENSMUST00000056931 NexmifQ5DTT1 1515 aa29.58■■■□□ 2.33
Ldb1-202ENSMUST00000056931 Ncoa3O09000 1398 aa29.58■■■□□ 2.33
Ldb1-202ENSMUST00000056931 Aebp2Q9Z248 504 aaKnown RBP29.56■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Ccnb3Q810T2 1396 aa29.56■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Wdr66E9Q743 1299 aa29.56■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Jph4Q80WT0 628 aa29.55■■■□□ 2.32
Ldb1-202ENSMUST00000056931 ClspnQ80YR7 1315 aa29.55■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Lmtk2Q3TYD6 1471 aa29.55■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Mug1P28665 1476 aa29.54■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Arhgef12Q8R4H2 1543 aaKnown RBP29.54■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Arhgef11Q68FM7 1552 aa29.52■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Fkbp15Q6P9Q6 1216 aaKnown RBP29.52■■■□□ 2.32
Ldb1-202ENSMUST00000056931 Ccdc141E9Q8Q6 1531 aa29.49■■■□□ 2.31
Ldb1-202ENSMUST00000056931 Mroh2aD3Z750 1679 aa29.48■■■□□ 2.31
Ldb1-202ENSMUST00000056931 Abcc1O35379 1528 aa29.45■■■□□ 2.31
Ldb1-202ENSMUST00000056931 Fam50aQ9WV03 339 aaKnown RBP29.44■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Gm14025A2AP89 1413 aa29.43■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Gcc2Q8CHG3 1679 aa29.42■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Ncoa2Q61026 1462 aa29.42■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Chd1P40201 1711 aa29.42■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Cdc42bpaQ3UU96 1719 aa29.41■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Rrbp1Q99PL5 1605 aaKnown RBP29.4■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Magi1Q6RHR9 1471 aa29.39■■■□□ 2.3
Ldb1-202ENSMUST00000056931 TonslQ6NZL6 1363 aa29.39■■■□□ 2.3
Ldb1-202ENSMUST00000056931 Kdm5bQ80Y84 1544 aa29.37■■■□□ 2.29
Ldb1-202ENSMUST00000056931 A2mQ6GQT1 1474 aa29.36■■■□□ 2.29
Ldb1-202ENSMUST00000056931 Kiaa1551Q5DTW7 1521 aa29.36■■■□□ 2.29
Ldb1-202ENSMUST00000056931 Pelp1Q9DBD5 1123 aaKnown RBP29.35■■■□□ 2.29
Ldb1-202ENSMUST00000056931 Prex2Q3LAC4 1598 aa29.34■■■□□ 2.29
Ldb1-202ENSMUST00000056931 Cdk11bP24788 784 aaKnown RBP29.33■■■□□ 2.29
Ldb1-202ENSMUST00000056931 1700123L14RikQ3V2K7 440 aa29.3■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Nop58Q6DFW4 536 aaKnown RBP29.29■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Fam163aQ8CAA5 168 aa29.27■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Arhgef40Q3UPH7 1517 aa29.27■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Naip2Q9QUK4 1447 aa29.27■■■□□ 2.28
Ldb1-202ENSMUST00000056931 Dhx57Q6P5D3 1388 aaKnown RBP29.25■■■□□ 2.27
Ldb1-202ENSMUST00000056931 Mapkbp1Q6NS57 1503 aa29.24■■■□□ 2.27
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms