RNA–Protein interactions for RNA: ENSMUST00000056931.13

Ldb1-202, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldb1, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-202ENSMUST00000056931 NischQ80TM9 1593 aa41.13■■■■■ 4.18
Ldb1-202ENSMUST00000056931 Gm35339A0A140LHH9 1649 aa40.95■■■■■ 4.15
Ldb1-202ENSMUST00000056931 Abcc9P70170 1546 aa39.88■■■■□ 3.97
Ldb1-202ENSMUST00000056931 Abcc8B2RUS7 1588 aa39.37■■■■□ 3.89
Ldb1-202ENSMUST00000056931 ScribQ80U72 1612 aa37.3■■■■□ 3.56
Ldb1-202ENSMUST00000056931 Rhox8Q6VSS7 320 aa37■■■■□ 3.51
Ldb1-202ENSMUST00000056931 Dcaf1Q80TR8 1506 aa36.42■■■■□ 3.42
Ldb1-202ENSMUST00000056931 Kdm5dQ62240 1548 aa36.35■■■■□ 3.41
Ldb1-202ENSMUST00000056931 NacadQ5SWP3 1504 aa36.15■■■■□ 3.38
Ldb1-202ENSMUST00000056931 Rb1cc1Q9ESK9 1588 aa35.96■■■■□ 3.35
Ldb1-202ENSMUST00000056931 Baz1aO88379 1555 aa35.48■■■■□ 3.27
Ldb1-202ENSMUST00000056931 Ccdc180J3QNE4 1664 aa35.42■■■■□ 3.26
Ldb1-202ENSMUST00000056931 Sycp2Q9CUU3 1500 aa35.41■■■■□ 3.26
Ldb1-202ENSMUST00000056931 Rtl1Q7M732 1744 aa35.34■■■■□ 3.25
Ldb1-202ENSMUST00000056931 Crybg2B7ZCC2 1516 aa34.98■■■■□ 3.19
Ldb1-202ENSMUST00000056931 Zcchc6Q5BLK4 1491 aaKnown RBP34.9■■■■□ 3.18
Ldb1-202ENSMUST00000056931 BicraF8VPZ9 1578 aa34.82■■■■□ 3.16
Ldb1-202ENSMUST00000056931 Smarca2Q6DIC0 1577 aa34.6■■■■□ 3.13
Ldb1-202ENSMUST00000056931 Ccdc136Q3TVA9 1136 aa34.5■■■■□ 3.11
Ldb1-202ENSMUST00000056931 Cecr2E9Q2Z1 1453 aa34.13■■■■□ 3.05
Ldb1-202ENSMUST00000056931 Trim41Q5NCC3 630 aa33.73■■■□□ 2.99
Ldb1-202ENSMUST00000056931 Brd4Q9ESU6 1400 aaKnown RBP33.66■■■□□ 2.98
Ldb1-202ENSMUST00000056931 Smarca4Q3TKT4 1613 aaKnown RBP33.65■■■□□ 2.98
Ldb1-202ENSMUST00000056931 Synj1Q8CHC4 1574 aa33.59■■■□□ 2.97
Ldb1-202ENSMUST00000056931 Rpgrip1Q9EPQ2 1331 aa33.52■■■□□ 2.96
Ldb1-202ENSMUST00000056931 CftrP26361 1476 aa33.47■■■□□ 2.95
Ldb1-202ENSMUST00000056931 Pds5bQ4VA53 1446 aaKnown RBP33.41■■■□□ 2.94
Ldb1-202ENSMUST00000056931 Atad2bE9Q166 1460 aaKnown RBP33.39■■■□□ 2.94
Ldb1-202ENSMUST00000056931 Iqgap2Q3UQ44 1575 aa33.33■■■□□ 2.93
Ldb1-202ENSMUST00000056931 Cttnbp2B9EJA2 1648 aa33.33■■■□□ 2.93
Ldb1-202ENSMUST00000056931 Esf1Q3V1V3 845 aaKnown RBP33.09■■■□□ 2.89
Ldb1-202ENSMUST00000056931 Cngb1E1AZ71 1325 aa33.05■■■□□ 2.88
Ldb1-202ENSMUST00000056931 HrcG5E8J6 738 aa33.03■■■□□ 2.88
Ldb1-202ENSMUST00000056931 Golga3P55937 1487 aa32.99■■■□□ 2.87
Ldb1-202ENSMUST00000056931 Frmpd1A2AKB4 1549 aa32.83■■■□□ 2.85
Ldb1-202ENSMUST00000056931 Wdr62Q3U3T8 1523 aa32.82■■■□□ 2.84
Ldb1-202ENSMUST00000056931 Ercc6F8VPZ5 1481 aa32.79■■■□□ 2.84
Ldb1-202ENSMUST00000056931 Top2bQ64511 1612 aa32.79■■■□□ 2.84
Ldb1-202ENSMUST00000056931 Acin1Q9JIX8 1338 aaKnown RBP32.73■■■□□ 2.83
Ldb1-202ENSMUST00000056931 Thoc2B1AZI6 1594 aaKnown RBP32.72■■■□□ 2.83
Ldb1-202ENSMUST00000056931 Rsf1E9PWW9 1441 aaKnown RBP32.63■■■□□ 2.81
Ldb1-202ENSMUST00000056931 Chic1Q8CBW7 227 aa32.61■■■□□ 2.81
Ldb1-202ENSMUST00000056931 Ccdc88bQ4QRL3 1481 aa32.6■■■□□ 2.81
Ldb1-202ENSMUST00000056931 Cc2d2aQ8CFW7 1633 aa32.56■■■□□ 2.8
Ldb1-202ENSMUST00000056931 Unc13aQ4KUS2 1712 aa32.49■■■□□ 2.79
Ldb1-202ENSMUST00000056931 Cep164Q5DU05 1446 aa32.48■■■□□ 2.79
Ldb1-202ENSMUST00000056931 Fmn1Q05860 1466 aa32.31■■■□□ 2.76
Ldb1-202ENSMUST00000056931 Dnajc5bQ9CQ94 199 aa32.29■■■□□ 2.76
Ldb1-202ENSMUST00000056931 Phldb1Q6PDH0 1371 aaKnown RBP32.27■■■□□ 2.76
Ldb1-202ENSMUST00000056931 Fam135aQ6NS59 1506 aa32.19■■■□□ 2.74
Ldb1-202ENSMUST00000056931 TnnQ80Z71 1560 aa32.14■■■□□ 2.74
Ldb1-202ENSMUST00000056931 Lamc3Q9R0B6 1581 aa32.13■■■□□ 2.73
Ldb1-202ENSMUST00000056931 Kif15Q6P9L6 1387 aa32.12■■■□□ 2.73
Ldb1-202ENSMUST00000056931 Gab3Q8BSM5 595 aa32.11■■■□□ 2.73
Ldb1-202ENSMUST00000056931 Ehmt2Q9Z148 1263 aaKnown RBP32.09■■■□□ 2.73
Ldb1-202ENSMUST00000056931 Ubl4bQ9CQ84 188 aa32.05■■■□□ 2.72
Ldb1-202ENSMUST00000056931 Top2aQ01320 1528 aaKnown RBP32.01■■■□□ 2.71
Ldb1-202ENSMUST00000056931 Il27Q8K3I6 234 aa31.82■■■□□ 2.68
Ldb1-202ENSMUST00000056931 Cux2P70298 1426 aa31.8■■■□□ 2.68
Ldb1-202ENSMUST00000056931 Camsap1A2AHC3 1581 aa31.76■■■□□ 2.67
Ldb1-202ENSMUST00000056931 Ccdc18Q640L5 1455 aa31.65■■■□□ 2.66
Ldb1-202ENSMUST00000056931 Rapgef2Q8CHG7 1496 aa31.58■■■□□ 2.65
Ldb1-202ENSMUST00000056931 Npm1Q61937 292 aaKnown RBP31.55■■■□□ 2.64
Ldb1-202ENSMUST00000056931 Pcgf6Q99NA9 353 aa31.52■■■□□ 2.64
Ldb1-202ENSMUST00000056931 Baz1bQ9Z277 1479 aa31.51■■■□□ 2.64
Ldb1-202ENSMUST00000056931 Mrc2Q64449 1479 aa31.5■■■□□ 2.63
Ldb1-202ENSMUST00000056931 PtprkP35822 1457 aa31.47■■■□□ 2.63
Ldb1-202ENSMUST00000056931 Grin2bQ01097 1482 aa31.45■■■□□ 2.63
Ldb1-202ENSMUST00000056931 Npm2Q80W85 207 aa31.43■■■□□ 2.62
Ldb1-202ENSMUST00000056931 Cep162Q6ZQ06 1403 aa31.36■■■□□ 2.61
Ldb1-202ENSMUST00000056931 LrpprcQ6PB66 1392 aaKnown RBP31.35■■■□□ 2.61
Ldb1-202ENSMUST00000056931 NrkQ9R0G8 1455 aa31.35■■■□□ 2.61
Ldb1-202ENSMUST00000056931 Shroom4Q1W617 1475 aa31.32■■■□□ 2.6
Ldb1-202ENSMUST00000056931 Kif21aQ9QXL2 1672 aa31.29■■■□□ 2.6
Ldb1-202ENSMUST00000056931 PogzQ8BZH4 1409 aaKnown RBP31.25■■■□□ 2.59
Ldb1-202ENSMUST00000056931 Eif4g1Q6NZJ6 1600 aaKnown RBP31.24■■■□□ 2.59
Ldb1-202ENSMUST00000056931 Myt1lP97500 1187 aa31.23■■■□□ 2.59
Ldb1-202ENSMUST00000056931 Dhx29Q6PGC1 1365 aaKnown RBP31.22■■■□□ 2.59
Ldb1-202ENSMUST00000056931 Duox2A2AQ99 1517 aa31.18■■■□□ 2.58
Ldb1-202ENSMUST00000056931 Arhgap35Q91YM2 1499 aa31.16■■■□□ 2.58
Ldb1-202ENSMUST00000056931 Efcab5A0JP43 1406 aa31.1■■■□□ 2.57
Ldb1-202ENSMUST00000056931 Crocc2F6XLV1 1638 aa31.04■■■□□ 2.56
Ldb1-202ENSMUST00000056931 Zeb1Q64318 1117 aa31.03■■■□□ 2.56
Ldb1-202ENSMUST00000056931 Samd9lQ69Z37 1561 aa31.01■■■□□ 2.55
Ldb1-202ENSMUST00000056931 Mroh2bQ7M6Y6 1581 aa30.98■■■□□ 2.55
Ldb1-202ENSMUST00000056931 Map3k1P53349 1493 aa30.91■■■□□ 2.54
Ldb1-202ENSMUST00000056931 Plb1Q3TTY0 1478 aa30.89■■■□□ 2.54
Ldb1-202ENSMUST00000056931 Supt5hO55201 1082 aaKnown RBP30.87■■■□□ 2.53
Ldb1-202ENSMUST00000056931 Urb2E9Q7L1 1524 aaKnown RBP30.84■■■□□ 2.53
Ldb1-202ENSMUST00000056931 Rad54l2Q99NG0 1466 aa30.84■■■□□ 2.53
Ldb1-202ENSMUST00000056931 Lrriq1Q0P5X1 1673 aa30.8■■■□□ 2.52
Ldb1-202ENSMUST00000056931 Clip1Q922J3 1391 aa30.8■■■□□ 2.52
Ldb1-202ENSMUST00000056931 SynmQ70IV5 1561 aa30.77■■■□□ 2.52
Ldb1-202ENSMUST00000056931 AqrQ8CFQ3 1481 aaKnown RBP30.7■■■□□ 2.51
Ldb1-202ENSMUST00000056931 NefmP08553 848 aa30.66■■■□□ 2.5
Ldb1-202ENSMUST00000056931 Carmil1Q6EDY6 1374 aa30.66■■■□□ 2.5
Ldb1-202ENSMUST00000056931 Disp1Q3TDN0 1521 aa30.64■■■□□ 2.5
Ldb1-202ENSMUST00000056931 Magi3Q9EQJ9 1476 aa30.61■■■□□ 2.49
Ldb1-202ENSMUST00000056931 Eea1Q8BL66 1411 aa30.58■■■□□ 2.49
Ldb1-202ENSMUST00000056931 Pla2r1Q62028 1487 aa30.58■■■□□ 2.49
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms