RNA–Protein interactions for RNA: ENSMUST00000053287.5

Usp42-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp42, Length 5,151 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42-201ENSMUST00000053287 4933416C03RikQ3V063 378 aa19.65■□□□□ 0.74
Usp42-201ENSMUST00000053287 Ccer2J3QPU5 274 aa19.64■□□□□ 0.73
Usp42-201ENSMUST00000053287 Gm13697A2AK42 830 aa19.64■□□□□ 0.73
Usp42-201ENSMUST00000053287 Setd5Q5XJV7 1441 aa19.63■□□□□ 0.73
Usp42-201ENSMUST00000053287 Baz1bQ9Z277 1479 aa19.63■□□□□ 0.73
Usp42-201ENSMUST00000053287 Il27Q8K3I6 234 aa19.63■□□□□ 0.73
Usp42-201ENSMUST00000053287 Ccdc9Q8VC31 543 aaKnown RBP19.61■□□□□ 0.73
Usp42-201ENSMUST00000053287 Ccdc27Q3V036 639 aa19.61■□□□□ 0.73
Usp42-201ENSMUST00000053287 Ccdc18Q640L5 1455 aa19.59■□□□□ 0.73
Usp42-201ENSMUST00000053287 BlmO88700 1416 aa19.57■□□□□ 0.72
Usp42-201ENSMUST00000053287 Rpap1Q80TE0 1409 aa19.57■□□□□ 0.72
Usp42-201ENSMUST00000053287 Lmod2Q3UHZ5 550 aa19.54■□□□□ 0.72
Usp42-201ENSMUST00000053287 Hsp90aa1P07901 733 aaKnown RBP19.52■□□□□ 0.72
Usp42-201ENSMUST00000053287 Upf2A2AT37 1269 aaKnown RBP19.48■□□□□ 0.71
Usp42-201ENSMUST00000053287 Mrs2Q5NCE8 434 aa19.47■□□□□ 0.71
Usp42-201ENSMUST00000053287 Hdac5Q9Z2V6 1113 aa19.47■□□□□ 0.71
Usp42-201ENSMUST00000053287 NeflP08551 543 aa19.44■□□□□ 0.7
Usp42-201ENSMUST00000053287 Hspa5P20029 655 aaKnown RBP19.44■□□□□ 0.7
Usp42-201ENSMUST00000053287 Smg6P61406 1418 aaKnown RBP19.44■□□□□ 0.7
Usp42-201ENSMUST00000053287 DaxxO35613 739 aa19.4■□□□□ 0.7
Usp42-201ENSMUST00000053287 P3h3Q8CG70 732 aa19.39■□□□□ 0.69
Usp42-201ENSMUST00000053287 Mia2Q91ZV0 1396 aa19.38■□□□□ 0.69
Usp42-201ENSMUST00000053287 UacaQ8CGB3 1411 aa19.36■□□□□ 0.69
Usp42-201ENSMUST00000053287 Irx3P81067 507 aa19.35■□□□□ 0.69
Usp42-201ENSMUST00000053287 Arap1Q4LDD4 1452 aa19.35■□□□□ 0.69
Usp42-201ENSMUST00000053287 Washc2Q6PGL7 1334 aa19.35■□□□□ 0.69
Usp42-201ENSMUST00000053287 Ipo9Q91YE6 1041 aa19.34■□□□□ 0.69
Usp42-201ENSMUST00000053287 Arhgap35Q91YM2 1499 aa19.33■□□□□ 0.69
Usp42-201ENSMUST00000053287 Smarca4Q3TKT4 1613 aaKnown RBP19.33■□□□□ 0.68
Usp42-201ENSMUST00000053287 Arhgef5E9Q7D5 1581 aa19.32■□□□□ 0.68
Usp42-201ENSMUST00000053287 Sin3aQ60520 1274 aaKnown RBP19.31■□□□□ 0.68
Usp42-201ENSMUST00000053287 Gtf3c3Q3TMP1 882 aa19.3■□□□□ 0.68
Usp42-201ENSMUST00000053287 Ankrd36D3Z4K0 1415 aa19.29■□□□□ 0.68
Usp42-201ENSMUST00000053287 Anp32bQ9EST5 272 aaKnown RBP19.29■□□□□ 0.68
Usp42-201ENSMUST00000053287 Slc4a3P16283 1227 aa19.24■□□□□ 0.67
Usp42-201ENSMUST00000053287 Pak3Q61036 559 aa19.23■□□□□ 0.67
Usp42-201ENSMUST00000053287 Tcerg1Q8CGF7 1100 aaKnown RBP19.21■□□□□ 0.67
Usp42-201ENSMUST00000053287 Ofd1Q80Z25 1017 aa19.21■□□□□ 0.66
Usp42-201ENSMUST00000053287 Tiam1Q60610 1591 aa19.2■□□□□ 0.66
Usp42-201ENSMUST00000053287 Gm13695A2AK44 830 aa19.17■□□□□ 0.66
Usp42-201ENSMUST00000053287 Wwc2Q6NXJ0 1187 aa19.16■□□□□ 0.66
Usp42-201ENSMUST00000053287 Chic2Q9D9G3 165 aa19.16■□□□□ 0.66
Usp42-201ENSMUST00000053287 Fhad1A6PWD2 1420 aa19.15■□□□□ 0.66
Usp42-201ENSMUST00000053287 TchhA0A0B4J1F9 1599 aa19.15■□□□□ 0.66
Usp42-201ENSMUST00000053287 Kdm5bQ80Y84 1544 aa19.15■□□□□ 0.66
Usp42-201ENSMUST00000053287 Fyco1Q8VDC1 1437 aa19.15■□□□□ 0.66
Usp42-201ENSMUST00000053287 Exoc6Q8R313 802 aa19.14■□□□□ 0.65
Usp42-201ENSMUST00000053287 Naip1Q9QWK5 1403 aa19.12■□□□□ 0.65
Usp42-201ENSMUST00000053287 CntlnA2AM05 1397 aa19.1■□□□□ 0.65
Usp42-201ENSMUST00000053287 Eif4g1Q6NZJ6 1600 aaKnown RBP19.1■□□□□ 0.65
Usp42-201ENSMUST00000053287 Vps8Q0P5W1 1427 aa19.09■□□□□ 0.65
Usp42-201ENSMUST00000053287 BicraF8VPZ9 1578 aa19.09■□□□□ 0.65
Usp42-201ENSMUST00000053287 NrkQ9R0G8 1455 aa19.07■□□□□ 0.64
Usp42-201ENSMUST00000053287 Map3k1P53349 1493 aa19.04■□□□□ 0.64
Usp42-201ENSMUST00000053287 Liat1Q810M6 228 aa19.04■□□□□ 0.64
Usp42-201ENSMUST00000053287 Dhx29Q6PGC1 1365 aaKnown RBP19.03■□□□□ 0.64
Usp42-201ENSMUST00000053287 Plcd4Q8K3R3 807 aa19.03■□□□□ 0.64
Usp42-201ENSMUST00000053287 CanxP35564 591 aaKnown RBP19.02■□□□□ 0.64
Usp42-201ENSMUST00000053287 Kif15Q6P9L6 1387 aa19.02■□□□□ 0.64
Usp42-201ENSMUST00000053287 Shroom4Q1W617 1475 aa19.01■□□□□ 0.63
Usp42-201ENSMUST00000053287 Camsap2Q8C1B1 1461 aa19.01■□□□□ 0.63
Usp42-201ENSMUST00000053287 Slc4a2P13808 1237 aaKnown RBP19■□□□□ 0.63
Usp42-201ENSMUST00000053287 PtprkP35822 1457 aa19■□□□□ 0.63
Usp42-201ENSMUST00000053287 Iqgap2Q3UQ44 1575 aa18.98■□□□□ 0.63
Usp42-201ENSMUST00000053287 Cwc22Q8C5N3 908 aaKnown RBP18.95■□□□□ 0.62
Usp42-201ENSMUST00000053287 Ncoa2Q61026 1462 aa18.94■□□□□ 0.62
Usp42-201ENSMUST00000053287 ChgaP26339 463 aaKnown RBP18.94■□□□□ 0.62
Usp42-201ENSMUST00000053287 Pknox2Q8BG99 474 aa18.93■□□□□ 0.62
Usp42-201ENSMUST00000053287 Egfem1Q8C088 590 aa18.92■□□□□ 0.62
Usp42-201ENSMUST00000053287 Mphosph9A6H5Y1 991 aa18.91■□□□□ 0.62
Usp42-201ENSMUST00000053287 Pcf11G3X9Z4 1553 aa18.91■□□□□ 0.62
Usp42-201ENSMUST00000053287 Slx4Q6P1D7 1565 aa18.91■□□□□ 0.62
Usp42-201ENSMUST00000053287 Fgd1P52734 960 aa18.9■□□□□ 0.62
Usp42-201ENSMUST00000053287 PnisrA2AJT4 805 aaKnown RBP18.9■□□□□ 0.62
Usp42-201ENSMUST00000053287 Iqcf3Q9D498 203 aa18.89■□□□□ 0.61
Usp42-201ENSMUST00000053287 AqrQ8CFQ3 1481 aaKnown RBP18.89■□□□□ 0.61
Usp42-201ENSMUST00000053287 Efcab5A0JP43 1406 aa18.89■□□□□ 0.61
Usp42-201ENSMUST00000053287 Npm1Q61937 292 aaKnown RBP18.88■□□□□ 0.61
Usp42-201ENSMUST00000053287 Cux1P53564 1515 aa18.88■□□□□ 0.61
Usp42-201ENSMUST00000053287 Rad21Q61550 635 aaKnown RBP18.88■□□□□ 0.61
Usp42-201ENSMUST00000053287 Naip5Q9R016 1403 aa18.86■□□□□ 0.61
Usp42-201ENSMUST00000053287 Ankrd26Q811D2 1581 aa18.85■□□□□ 0.61
Usp42-201ENSMUST00000053287 Naip2Q9QUK4 1447 aa18.83■□□□□ 0.61
Usp42-201ENSMUST00000053287 Aebp1Q640N1 1128 aa18.83■□□□□ 0.61
Usp42-201ENSMUST00000053287 Carmil1Q6EDY6 1374 aa18.83■□□□□ 0.6
Usp42-201ENSMUST00000053287 Pkd2O35245 966 aa18.83■□□□□ 0.6
Usp42-201ENSMUST00000053287 Ipo4Q8VI75 1082 aa18.82■□□□□ 0.6
Usp42-201ENSMUST00000053287 Ppm1gQ61074 542 aa18.81■□□□□ 0.6
Usp42-201ENSMUST00000053287 TnnQ80Z71 1560 aa18.81■□□□□ 0.6
Usp42-201ENSMUST00000053287 Usp47Q8BY87 1376 aa18.8■□□□□ 0.6
Usp42-201ENSMUST00000053287 Mroh2bQ7M6Y6 1581 aa18.8■□□□□ 0.6
Usp42-201ENSMUST00000053287 Rgl3Q3UYI5 709 aa18.8■□□□□ 0.6
Usp42-201ENSMUST00000053287 Erich3F6QRE9 1637 aa18.8■□□□□ 0.6
Usp42-201ENSMUST00000053287 Card11Q8CIS0 1159 aa18.79■□□□□ 0.6
Usp42-201ENSMUST00000053287 Kcnh8P59111 1102 aa18.79■□□□□ 0.6
Usp42-201ENSMUST00000053287 B4galnt3Q6L8S8 986 aa18.79■□□□□ 0.6
Usp42-201ENSMUST00000053287 3425401B19RikD3Z1D3 1412 aa18.78■□□□□ 0.6
Usp42-201ENSMUST00000053287 Dnai1Q8C0M8 701 aa18.78■□□□□ 0.6
Usp42-201ENSMUST00000053287 Mbd3Q9Z2D8 285 aaKnown RBP18.78■□□□□ 0.6
Usp42-201ENSMUST00000053287 Ncoa1P70365 1447 aa18.77■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms