RNA–Protein interactions for RNA: ENSMUST00000053287.5

Usp42-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp42, Length 5,151 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42-201ENSMUST00000053287 Rpgrip1Q9EPQ2 1331 aa24.54■■□□□ 1.52
Usp42-201ENSMUST00000053287 Rhox8Q6VSS7 320 aa24.41■■□□□ 1.5
Usp42-201ENSMUST00000053287 NischQ80TM9 1593 aa24.33■■□□□ 1.48
Usp42-201ENSMUST00000053287 Rtl1Q7M732 1744 aa23.84■■□□□ 1.41
Usp42-201ENSMUST00000053287 Ccdc180J3QNE4 1664 aa23.69■■□□□ 1.38
Usp42-201ENSMUST00000053287 Acin1Q9JIX8 1338 aaKnown RBP23.47■■□□□ 1.35
Usp42-201ENSMUST00000053287 Abcc9P70170 1546 aa23.43■■□□□ 1.34
Usp42-201ENSMUST00000053287 Ehmt2Q9Z148 1263 aaKnown RBP23.22■■□□□ 1.31
Usp42-201ENSMUST00000053287 Gm35339A0A140LHH9 1649 aa22.95■■□□□ 1.26
Usp42-201ENSMUST00000053287 Pcgf6Q99NA9 353 aa22.92■■□□□ 1.26
Usp42-201ENSMUST00000053287 Abcc8B2RUS7 1588 aa22.66■■□□□ 1.22
Usp42-201ENSMUST00000053287 Las1lA2BE28 776 aaKnown RBP22.61■■□□□ 1.21
Usp42-201ENSMUST00000053287 HrcG5E8J6 738 aa22.58■■□□□ 1.2
Usp42-201ENSMUST00000053287 Dcaf1Q80TR8 1506 aa22.47■■□□□ 1.19
Usp42-201ENSMUST00000053287 Supt5hO55201 1082 aaKnown RBP22.31■■□□□ 1.16
Usp42-201ENSMUST00000053287 Ccdc136Q3TVA9 1136 aa22.3■■□□□ 1.16
Usp42-201ENSMUST00000053287 Zcchc6Q5BLK4 1491 aaKnown RBP22.28■■□□□ 1.16
Usp42-201ENSMUST00000053287 Zeb1Q64318 1117 aa22.17■■□□□ 1.14
Usp42-201ENSMUST00000053287 Trim41Q5NCC3 630 aa22.16■■□□□ 1.14
Usp42-201ENSMUST00000053287 Neurod1Q60867 357 aa22.01■■□□□ 1.11
Usp42-201ENSMUST00000053287 Cngb1E1AZ71 1325 aa21.93■■□□□ 1.1
Usp42-201ENSMUST00000053287 NefmP08553 848 aa21.93■■□□□ 1.1
Usp42-201ENSMUST00000053287 Myt1Q8CFC2 1127 aa21.74■■□□□ 1.07
Usp42-201ENSMUST00000053287 Wdr66E9Q743 1299 aa21.72■■□□□ 1.07
Usp42-201ENSMUST00000053287 CenpbP27790 599 aa21.65■■□□□ 1.06
Usp42-201ENSMUST00000053287 Gab3Q8BSM5 595 aa21.6■■□□□ 1.05
Usp42-201ENSMUST00000053287 Cep164Q5DU05 1446 aa21.53■■□□□ 1.04
Usp42-201ENSMUST00000053287 Anks4bQ8K3X6 423 aa21.52■■□□□ 1.04
Usp42-201ENSMUST00000053287 Mier1Q5UAK0 511 aa21.45■■□□□ 1.03
Usp42-201ENSMUST00000053287 Cdk11bP24788 784 aaKnown RBP21.45■■□□□ 1.02
Usp42-201ENSMUST00000053287 Sall2Q9QX96 1004 aa21.44■■□□□ 1.02
Usp42-201ENSMUST00000053287 Rb1cc1Q9ESK9 1588 aa21.43■■□□□ 1.02
Usp42-201ENSMUST00000053287 Csrnp3P59055 597 aa21.42■■□□□ 1.02
Usp42-201ENSMUST00000053287 1700123L14RikQ3V2K7 440 aa21.39■■□□□ 1.01
Usp42-201ENSMUST00000053287 Nop58Q6DFW4 536 aaKnown RBP21.31■■□□□ 1
Usp42-201ENSMUST00000053287 Aplp2Q06335 707 aa21.25■□□□□ 0.99
Usp42-201ENSMUST00000053287 UbtfP25976 765 aaKnown RBP21.15■□□□□ 0.98
Usp42-201ENSMUST00000053287 Baz1aO88379 1555 aa21.12■□□□□ 0.97
Usp42-201ENSMUST00000053287 ClspnQ80YR7 1315 aa21.11■□□□□ 0.97
Usp42-201ENSMUST00000053287 DiexfQ8BTT6 772 aaKnown RBP20.99■□□□□ 0.95
Usp42-201ENSMUST00000053287 Ppargc1bQ8VHJ7 1014 aa20.96■□□□□ 0.95
Usp42-201ENSMUST00000053287 Chic1Q8CBW7 227 aa20.95■□□□□ 0.94
Usp42-201ENSMUST00000053287 Esf1Q3V1V3 845 aaKnown RBP20.91■□□□□ 0.94
Usp42-201ENSMUST00000053287 Gm38655A0A286YDK6 273 aa20.9■□□□□ 0.94
Usp42-201ENSMUST00000053287 TonslQ6NZL6 1363 aa20.89■□□□□ 0.94
Usp42-201ENSMUST00000053287 Tnnt3Q9QZ47 272 aa20.89■□□□□ 0.93
Usp42-201ENSMUST00000053287 Aebp2Q9Z248 504 aaKnown RBP20.84■□□□□ 0.93
Usp42-201ENSMUST00000053287 Pelp1Q9DBD5 1123 aaKnown RBP20.83■□□□□ 0.92
Usp42-201ENSMUST00000053287 Rsf1E9PWW9 1441 aaKnown RBP20.78■□□□□ 0.92
Usp42-201ENSMUST00000053287 Myt1lP97500 1187 aa20.74■□□□□ 0.91
Usp42-201ENSMUST00000053287 Stra8P70278 393 aa20.64■□□□□ 0.9
Usp42-201ENSMUST00000053287 Brd4Q9ESU6 1400 aaKnown RBP20.64■□□□□ 0.89
Usp42-201ENSMUST00000053287 Kdm5dQ62240 1548 aa20.63■□□□□ 0.89
Usp42-201ENSMUST00000053287 Npm2Q80W85 207 aa20.59■□□□□ 0.89
Usp42-201ENSMUST00000053287 Smarca2Q6DIC0 1577 aa20.53■□□□□ 0.88
Usp42-201ENSMUST00000053287 Fam71e1A1L3C1 212 aa20.52■□□□□ 0.88
Usp42-201ENSMUST00000053287 Golga3P55937 1487 aa20.52■□□□□ 0.88
Usp42-201ENSMUST00000053287 Rtl5Q5DTT4 599 aa20.51■□□□□ 0.87
Usp42-201ENSMUST00000053287 Bcl11aQ9QYE3 773 aa20.51■□□□□ 0.87
Usp42-201ENSMUST00000053287 NacadQ5SWP3 1504 aa20.51■□□□□ 0.87
Usp42-201ENSMUST00000053287 Anp32aO35381 247 aa20.5■□□□□ 0.87
Usp42-201ENSMUST00000053287 Ccdc88bQ4QRL3 1481 aa20.49■□□□□ 0.87
Usp42-201ENSMUST00000053287 ScribQ80U72 1612 aa20.48■□□□□ 0.87
Usp42-201ENSMUST00000053287 Mapk8ip2Q9ERE9 830 aa20.41■□□□□ 0.86
Usp42-201ENSMUST00000053287 Crybg2B7ZCC2 1516 aa20.37■□□□□ 0.85
Usp42-201ENSMUST00000053287 Hnrnpul2Q00PI9 745 aaKnown RBP20.33■□□□□ 0.85
Usp42-201ENSMUST00000053287 Plekhg3Q4VAC9 1341 aa20.29■□□□□ 0.84
Usp42-201ENSMUST00000053287 Ap3b1Q9Z1T1 1105 aa20.29■□□□□ 0.84
Usp42-201ENSMUST00000053287 SafbD3YXK2 937 aaKnown RBP20.28■□□□□ 0.84
Usp42-201ENSMUST00000053287 Clip1Q922J3 1391 aa20.2■□□□□ 0.82
Usp42-201ENSMUST00000053287 NclP09405 707 aaKnown RBP20.19■□□□□ 0.82
Usp42-201ENSMUST00000053287 Slc24a1Q91WD8 1130 aa20.15■□□□□ 0.82
Usp42-201ENSMUST00000053287 Eid3Q3V124 375 aa20.12■□□□□ 0.81
Usp42-201ENSMUST00000053287 Calr4Q3TQS0 420 aa20.09■□□□□ 0.81
Usp42-201ENSMUST00000053287 Amer1Q7TS75 1132 aa20.09■□□□□ 0.81
Usp42-201ENSMUST00000053287 Ttbk1Q6PCN3 1308 aa20.05■□□□□ 0.8
Usp42-201ENSMUST00000053287 Rapgef2Q8CHG7 1496 aa20.03■□□□□ 0.8
Usp42-201ENSMUST00000053287 Synj1Q8CHC4 1574 aa20.01■□□□□ 0.79
Usp42-201ENSMUST00000053287 Cep162Q6ZQ06 1403 aa19.99■□□□□ 0.79
Usp42-201ENSMUST00000053287 Ube2uB1AUC4 352 aa19.95■□□□□ 0.78
Usp42-201ENSMUST00000053287 Eif5bQ05D44 1216 aaKnown RBP19.95■□□□□ 0.78
Usp42-201ENSMUST00000053287 Fam50aQ9WV03 339 aaKnown RBP19.94■□□□□ 0.78
Usp42-201ENSMUST00000053287 Cecr2E9Q2Z1 1453 aa19.93■□□□□ 0.78
Usp42-201ENSMUST00000053287 Sycp2Q9CUU3 1500 aa19.89■□□□□ 0.77
Usp42-201ENSMUST00000053287 Ppp4r2Q0VGB7 417 aa19.87■□□□□ 0.77
Usp42-201ENSMUST00000053287 Wdr43Q6ZQL4 677 aaKnown RBP19.83■□□□□ 0.76
Usp42-201ENSMUST00000053287 CftrP26361 1476 aa19.82■□□□□ 0.76
Usp42-201ENSMUST00000053287 Fmn1Q05860 1466 aa19.82■□□□□ 0.76
Usp42-201ENSMUST00000053287 Ncapd3Q6ZQK0 1506 aa19.81■□□□□ 0.76
Usp42-201ENSMUST00000053287 Nolc1E9Q5C9 702 aaKnown RBP19.79■□□□□ 0.76
Usp42-201ENSMUST00000053287 NrdcQ8BHG1 1161 aa19.78■□□□□ 0.76
Usp42-201ENSMUST00000053287 PrkcshO08795 521 aa19.77■□□□□ 0.76
Usp42-201ENSMUST00000053287 Cc2d2aQ8CFW7 1633 aa19.76■□□□□ 0.75
Usp42-201ENSMUST00000053287 Top2bQ64511 1612 aa19.75■□□□□ 0.75
Usp42-201ENSMUST00000053287 Znf710Q3U288 666 aa19.72■□□□□ 0.75
Usp42-201ENSMUST00000053287 Supt16hQ920B9 1047 aa19.72■□□□□ 0.75
Usp42-201ENSMUST00000053287 Ifnlr1Q8CGK5 535 aa19.71■□□□□ 0.75
Usp42-201ENSMUST00000053287 Eea1Q8BL66 1411 aa19.7■□□□□ 0.74
Usp42-201ENSMUST00000053287 Top2aQ01320 1528 aaKnown RBP19.67■□□□□ 0.74
Usp42-201ENSMUST00000053287 Cttnbp2B9EJA2 1648 aa19.66■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms