RNA–Protein interactions for RNA: ENSMUST00000047645.12

Vldlr-202, Transcript of Very low-density lipoprotein receptor, mousemouse

TSL 5 BASIC

Gene Vldlr, Length 3,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vldlr-202ENSMUST00000047645 Ift140E9PY46 1464 aa23.86■■□□□ 1.41
Vldlr-202ENSMUST00000047645 Cux1P53564 1515 aa23.82■■□□□ 1.4
Vldlr-202ENSMUST00000047645 Setd1bQ8CFT2 1985 aa23.8■■□□□ 1.4
Vldlr-202ENSMUST00000047645 Eea1Q8BL66 1411 aa23.79■■□□□ 1.4
Vldlr-202ENSMUST00000047645 UbtfP25976 765 aaKnown RBP23.77■■□□□ 1.4
Vldlr-202ENSMUST00000047645 AqrQ8CFQ3 1481 aaKnown RBP23.77■■□□□ 1.39
Vldlr-202ENSMUST00000047645 EprsQ8CGC7 1512 aaKnown RBP23.75■■□□□ 1.39
Vldlr-202ENSMUST00000047645 Nup160Q9Z0W3 1402 aaKnown RBP23.75■■□□□ 1.39
Vldlr-202ENSMUST00000047645 Arap1Q4LDD4 1452 aa23.74■■□□□ 1.39
Vldlr-202ENSMUST00000047645 Ankrd26Q811D2 1581 aa23.71■■□□□ 1.39
Vldlr-202ENSMUST00000047645 Supt5hO55201 1082 aaKnown RBP23.7■■□□□ 1.38
Vldlr-202ENSMUST00000047645 Arhgap27A2AB59 869 aa23.69■■□□□ 1.38
Vldlr-202ENSMUST00000047645 Rpap1Q80TE0 1409 aa23.69■■□□□ 1.38
Vldlr-202ENSMUST00000047645 Lmod2Q3UHZ5 550 aa23.68■■□□□ 1.38
Vldlr-202ENSMUST00000047645 PxdnQ3UQ28 1475 aa23.65■■□□□ 1.38
Vldlr-202ENSMUST00000047645 CadpsQ80TJ1 1355 aa23.65■■□□□ 1.38
Vldlr-202ENSMUST00000047645 Eif4g3Q80XI3 1579 aaKnown RBP23.65■■□□□ 1.38
Vldlr-202ENSMUST00000047645 WizO88286 1684 aaKnown RBP23.65■■□□□ 1.38
Vldlr-202ENSMUST00000047645 Cc2d2bA0A286YDU8 1405 aa23.62■■□□□ 1.37
Vldlr-202ENSMUST00000047645 Rusc2Q80U22 1514 aa23.61■■□□□ 1.37
Vldlr-202ENSMUST00000047645 Aebp1Q640N1 1128 aa23.6■■□□□ 1.37
Vldlr-202ENSMUST00000047645 Gm7298A0A0N4SVU1 1476 aa23.6■■□□□ 1.37
Vldlr-202ENSMUST00000047645 Fyco1Q8VDC1 1437 aa23.6■■□□□ 1.37
Vldlr-202ENSMUST00000047645 Mier1Q5UAK0 511 aa23.55■■□□□ 1.36
Vldlr-202ENSMUST00000047645 Pcf11G3X9Z4 1553 aa23.55■■□□□ 1.36
Vldlr-202ENSMUST00000047645 Arhgef5E9Q7D5 1581 aa23.53■■□□□ 1.36
Vldlr-202ENSMUST00000047645 Pbrm1Q8BSQ9 1634 aaKnown RBP23.53■■□□□ 1.36
Vldlr-202ENSMUST00000047645 Polr1aO35134 1717 aaKnown RBP23.52■■□□□ 1.36
Vldlr-202ENSMUST00000047645 Adamts12Q811B3 1600 aa23.51■■□□□ 1.35
Vldlr-202ENSMUST00000047645 BlmO88700 1416 aa23.5■■□□□ 1.35
Vldlr-202ENSMUST00000047645 Abca16E9PWJ7 1678 aa23.49■■□□□ 1.35
Vldlr-202ENSMUST00000047645 TchhA0A0B4J1F9 1599 aa23.49■■□□□ 1.35
Vldlr-202ENSMUST00000047645 Erich3F6QRE9 1637 aa23.48■■□□□ 1.35
Vldlr-202ENSMUST00000047645 Neurod1Q60867 357 aa23.48■■□□□ 1.35
Vldlr-202ENSMUST00000047645 WrnO09053 1401 aa23.47■■□□□ 1.35
Vldlr-202ENSMUST00000047645 AknaQ80VW7 1404 aa23.47■■□□□ 1.35
Vldlr-202ENSMUST00000047645 Fkbp15Q6P9Q6 1216 aaKnown RBP23.46■■□□□ 1.35
Vldlr-202ENSMUST00000047645 Gpatch8A2A6A1 1505 aa23.45■■□□□ 1.34
Vldlr-202ENSMUST00000047645 Naip1Q9QWK5 1403 aa23.45■■□□□ 1.34
Vldlr-202ENSMUST00000047645 Abcc2Q8VI47 1543 aa23.44■■□□□ 1.34
Vldlr-202ENSMUST00000047645 Lmo7E9PYF4 1699 aaKnown RBP23.43■■□□□ 1.34
Vldlr-202ENSMUST00000047645 Soga1E1U8D0 1418 aa23.42■■□□□ 1.34
Vldlr-202ENSMUST00000047645 Slx4Q6P1D7 1565 aa23.41■■□□□ 1.34
Vldlr-202ENSMUST00000047645 Abca5Q8K448 1642 aa23.4■■□□□ 1.34
Vldlr-202ENSMUST00000047645 Pelp1Q9DBD5 1123 aaKnown RBP23.4■■□□□ 1.34
Vldlr-202ENSMUST00000047645 Tiam1Q60610 1591 aa23.37■■□□□ 1.33
Vldlr-202ENSMUST00000047645 CntlnA2AM05 1397 aa23.36■■□□□ 1.33
Vldlr-202ENSMUST00000047645 Kif27Q7M6Z4 1394 aa23.36■■□□□ 1.33
Vldlr-202ENSMUST00000047645 Neo1P97798 1493 aa23.34■■□□□ 1.33
Vldlr-202ENSMUST00000047645 Fgd6Q69ZL1 1399 aa23.34■■□□□ 1.33
Vldlr-202ENSMUST00000047645 Shroom2A2ALU4 1481 aa23.33■■□□□ 1.32
Vldlr-202ENSMUST00000047645 BC005561E9Q5E2 1589 aa23.26■■□□□ 1.31
Vldlr-202ENSMUST00000047645 Gm1043A0A140LJC2 1431 aa23.25■■□□□ 1.31
Vldlr-202ENSMUST00000047645 Ifnlr1Q8CGK5 535 aa23.23■■□□□ 1.31
Vldlr-202ENSMUST00000047645 Jph4Q80WT0 628 aa23.22■■□□□ 1.31
Vldlr-202ENSMUST00000047645 Dnmt1P13864 1620 aaKnown RBP23.22■■□□□ 1.31
Vldlr-202ENSMUST00000047645 Arhgap31A6X8Z5 1425 aa23.2■■□□□ 1.3
Vldlr-202ENSMUST00000047645 Map3k4O08648 1597 aa23.18■■□□□ 1.3
Vldlr-202ENSMUST00000047645 Ncoa3O09000 1398 aa23.12■■□□□ 1.29
Vldlr-202ENSMUST00000047645 Fam50aQ9WV03 339 aaKnown RBP23.12■■□□□ 1.29
Vldlr-202ENSMUST00000047645 Pabpn1Q8CCS6 302 aaKnown RBP23.11■■□□□ 1.29
Vldlr-202ENSMUST00000047645 Abcc1O35379 1528 aa23.1■■□□□ 1.29
Vldlr-202ENSMUST00000047645 Gm14025A2AP89 1413 aa23.09■■□□□ 1.29
Vldlr-202ENSMUST00000047645 Ccnb3Q810T2 1396 aa23.09■■□□□ 1.29
Vldlr-202ENSMUST00000047645 Zcchc11B2RX14 1644 aaKnown RBP23.08■■□□□ 1.29
Vldlr-202ENSMUST00000047645 Arhgef12Q8R4H2 1543 aaKnown RBP23.08■■□□□ 1.28
Vldlr-202ENSMUST00000047645 Peg3Q3URU2 1571 aa23.06■■□□□ 1.28
Vldlr-202ENSMUST00000047645 Rapgef6Q5NCJ1 1609 aa23.06■■□□□ 1.28
Vldlr-202ENSMUST00000047645 3425401B19RikD3Z1D3 1412 aa23.04■■□□□ 1.28
Vldlr-202ENSMUST00000047645 Mug1P28665 1476 aa23.04■■□□□ 1.28
Vldlr-202ENSMUST00000047645 NexmifQ5DTT1 1515 aa23.04■■□□□ 1.28
Vldlr-202ENSMUST00000047645 Ncapd3Q6ZQK0 1506 aa23.02■■□□□ 1.28
Vldlr-202ENSMUST00000047645 Ccdc141E9Q8Q6 1531 aa23.02■■□□□ 1.27
Vldlr-202ENSMUST00000047645 Chic2Q9D9G3 165 aa23■■□□□ 1.27
Vldlr-202ENSMUST00000047645 Ythdc2B2RR83 1445 aaKnown RBP22.98■■□□□ 1.27
Vldlr-202ENSMUST00000047645 Mroh2aD3Z750 1679 aa22.97■■□□□ 1.27
Vldlr-202ENSMUST00000047645 Arhgef11Q68FM7 1552 aa22.96■■□□□ 1.27
Vldlr-202ENSMUST00000047645 Chd1P40201 1711 aa22.95■■□□□ 1.26
Vldlr-202ENSMUST00000047645 Magi1Q6RHR9 1471 aa22.94■■□□□ 1.26
Vldlr-202ENSMUST00000047645 Prex2Q3LAC4 1598 aa22.92■■□□□ 1.26
Vldlr-202ENSMUST00000047645 NefmP08553 848 aa22.92■■□□□ 1.26
Vldlr-202ENSMUST00000047645 Ncoa2Q61026 1462 aa22.91■■□□□ 1.26
Vldlr-202ENSMUST00000047645 Las1lA2BE28 776 aaKnown RBP22.91■■□□□ 1.26
Vldlr-202ENSMUST00000047645 PtprtQ99M80 1454 aa22.89■■□□□ 1.26
Vldlr-202ENSMUST00000047645 Gapvd1Q6PAR5 1458 aa22.89■■□□□ 1.25
Vldlr-202ENSMUST00000047645 Lmtk2Q3TYD6 1471 aa22.88■■□□□ 1.25
Vldlr-202ENSMUST00000047645 Arid3cA6PWV5 409 aa22.88■■□□□ 1.25
Vldlr-202ENSMUST00000047645 Eid3Q3V124 375 aa22.87■■□□□ 1.25
Vldlr-202ENSMUST00000047645 1700123L14RikQ3V2K7 440 aa22.85■■□□□ 1.25
Vldlr-202ENSMUST00000047645 Fam163aQ8CAA5 168 aa22.84■■□□□ 1.25
Vldlr-202ENSMUST00000047645 Arhgef40Q3UPH7 1517 aa22.83■■□□□ 1.25
Vldlr-202ENSMUST00000047645 A2mQ6GQT1 1474 aa22.83■■□□□ 1.25
Vldlr-202ENSMUST00000047645 Rrbp1Q99PL5 1605 aaKnown RBP22.83■■□□□ 1.25
Vldlr-202ENSMUST00000047645 Znf608Q56A10 1511 aa22.82■■□□□ 1.24
Vldlr-202ENSMUST00000047645 Csrnp3P59055 597 aa22.81■■□□□ 1.24
Vldlr-202ENSMUST00000047645 Cdc42bpaQ3UU96 1719 aa22.81■■□□□ 1.24
Vldlr-202ENSMUST00000047645 Kiaa1551Q5DTW7 1521 aa22.8■■□□□ 1.24
Vldlr-202ENSMUST00000047645 Ube2uB1AUC4 352 aa22.79■■□□□ 1.24
Vldlr-202ENSMUST00000047645 Cabp1Q9JLK7 227 aa22.79■■□□□ 1.24
Vldlr-202ENSMUST00000047645 Tdrd9Q14BI7 1383 aa22.79■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 79.7 ms