RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Clstn2Q9ER65 966 aa30.52■■■□□ 2.48
Sh3rf1-201ENSMUST00000034060 Hsp90ab1P11499 724 aaKnown RBP30.52■■■□□ 2.48
Sh3rf1-201ENSMUST00000034060 Htatsf1Q8BGC0 757 aa30.51■■■□□ 2.47
Sh3rf1-201ENSMUST00000034060 BlmO88700 1416 aa30.44■■■□□ 2.46
Sh3rf1-201ENSMUST00000034060 Lmod3E9QA62 571 aa30.42■■■□□ 2.46
Sh3rf1-201ENSMUST00000034060 Rb1cc1Q9ESK9 1588 aa30.39■■■□□ 2.46
Sh3rf1-201ENSMUST00000034060 Trim30dE9PWL0 497 aa30.35■■■□□ 2.45
Sh3rf1-201ENSMUST00000034060 Gm13695A2AK44 830 aa30.34■■■□□ 2.45
Sh3rf1-201ENSMUST00000034060 Ppm1gQ61074 542 aa30.34■■■□□ 2.45
Sh3rf1-201ENSMUST00000034060 Ofd1Q80Z25 1017 aa30.34■■■□□ 2.45
Sh3rf1-201ENSMUST00000034060 Chic2Q9D9G3 165 aa30.31■■■□□ 2.44
Sh3rf1-201ENSMUST00000034060 Aebp2Q9Z248 504 aaKnown RBP30.29■■■□□ 2.44
Sh3rf1-201ENSMUST00000034060 Fgd1P52734 960 aa30.28■■■□□ 2.44
Sh3rf1-201ENSMUST00000034060 PtmaP26350 111 aa30.26■■■□□ 2.43
Sh3rf1-201ENSMUST00000034060 Bcl11aQ9QYE3 773 aa30.26■■■□□ 2.43
Sh3rf1-201ENSMUST00000034060 Ifnlr1Q8CGK5 535 aa30.21■■■□□ 2.43
Sh3rf1-201ENSMUST00000034060 Setd5Q5XJV7 1441 aa30.21■■■□□ 2.43
Sh3rf1-201ENSMUST00000034060 Vsig10D3YX43 558 aa30.2■■■□□ 2.42
Sh3rf1-201ENSMUST00000034060 Irx3P81067 507 aa30.2■■■□□ 2.42
Sh3rf1-201ENSMUST00000034060 Rangap1P46061 589 aaKnown RBP30.16■■■□□ 2.42
Sh3rf1-201ENSMUST00000034060 Cwc22Q8C5N3 908 aaKnown RBP30.16■■■□□ 2.42
Sh3rf1-201ENSMUST00000034060 Plcb2A3KGF7 1181 aa30.1■■■□□ 2.41
Sh3rf1-201ENSMUST00000034060 Fkbp15Q6P9Q6 1216 aaKnown RBP30.09■■■□□ 2.41
Sh3rf1-201ENSMUST00000034060 Adam1bQ8R534 806 aa30.08■■■□□ 2.41
Sh3rf1-201ENSMUST00000034060 Mbd3Q9Z2D8 285 aaKnown RBP30.08■■■□□ 2.41
Sh3rf1-201ENSMUST00000034060 Chmp4bQ9D8B3 224 aaKnown RBP30.03■■■□□ 2.4
Sh3rf1-201ENSMUST00000034060 Map7O88735 730 aa30.01■■■□□ 2.39
Sh3rf1-201ENSMUST00000034060 Rgl3Q3UYI5 709 aa29.98■■■□□ 2.39
Sh3rf1-201ENSMUST00000034060 AU015836B2RUM3 263 aa29.97■■■□□ 2.39
Sh3rf1-201ENSMUST00000034060 Golga3P55937 1487 aa29.96■■■□□ 2.39
Sh3rf1-201ENSMUST00000034060 P3h3Q8CG70 732 aa29.96■■■□□ 2.39
Sh3rf1-201ENSMUST00000034060 Eea1Q8BL66 1411 aa29.96■■■□□ 2.39
Sh3rf1-201ENSMUST00000034060 Trim26Q99PN3 545 aa29.93■■■□□ 2.38
Sh3rf1-201ENSMUST00000034060 Card11Q8CIS0 1159 aa29.89■■■□□ 2.37
Sh3rf1-201ENSMUST00000034060 Mia2Q91ZV0 1396 aa29.88■■■□□ 2.37
Sh3rf1-201ENSMUST00000034060 Tcerg1Q8CGF7 1100 aaKnown RBP29.86■■■□□ 2.37
Sh3rf1-201ENSMUST00000034060 Ubl4bQ9CQ84 188 aa29.8■■■□□ 2.36
Sh3rf1-201ENSMUST00000034060 Casc1Q6TDU8 730 aa29.78■■■□□ 2.36
Sh3rf1-201ENSMUST00000034060 Tnnt2P50752 301 aa29.77■■■□□ 2.36
Sh3rf1-201ENSMUST00000034060 IqubQ8CDK3 788 aa29.75■■■□□ 2.35
Sh3rf1-201ENSMUST00000034060 Arid4bA2CG63 1314 aaKnown RBP29.75■■■□□ 2.35
Sh3rf1-201ENSMUST00000034060 Mapk8ip3Q9ESN9 1337 aa29.72■■■□□ 2.35
Sh3rf1-201ENSMUST00000034060 PtmsQ9D0J8 101 aaKnown RBP29.72■■■□□ 2.35
Sh3rf1-201ENSMUST00000034060 SafbD3YXK2 937 aaKnown RBP29.71■■■□□ 2.35
Sh3rf1-201ENSMUST00000034060 KnstrnQ9D9Z1 312 aaKnown RBP29.71■■■□□ 2.35
Sh3rf1-201ENSMUST00000034060 Baz1aO88379 1555 aa29.7■■■□□ 2.35
Sh3rf1-201ENSMUST00000034060 NudcO35685 332 aaKnown RBP29.7■■■□□ 2.34
Sh3rf1-201ENSMUST00000034060 Ipo9Q91YE6 1041 aa29.69■■■□□ 2.34
Sh3rf1-201ENSMUST00000034060 Apbb1Q9QXJ1 710 aa29.69■■■□□ 2.34
Sh3rf1-201ENSMUST00000034060 Rwdd1Q9CQK7 243 aa29.66■■■□□ 2.34
Sh3rf1-201ENSMUST00000034060 Dnttip2Q8R2M2 758 aaKnown RBP29.65■■■□□ 2.34
Sh3rf1-201ENSMUST00000034060 Srpk2O54781 681 aaKnown RBP29.63■■■□□ 2.33
Sh3rf1-201ENSMUST00000034060 Zfp777B9EKF4 885 aa29.62■■■□□ 2.33
Sh3rf1-201ENSMUST00000034060 Dbr1Q923B1 550 aa29.62■■■□□ 2.33
Sh3rf1-201ENSMUST00000034060 Dnai1Q8C0M8 701 aa29.62■■■□□ 2.33
Sh3rf1-201ENSMUST00000034060 Neurod2Q62414 383 aa29.61■■■□□ 2.33
Sh3rf1-201ENSMUST00000034060 Grwd1Q810D6 446 aaKnown RBP29.6■■■□□ 2.33
Sh3rf1-201ENSMUST00000034060 Supt16hQ920B9 1047 aa29.58■■■□□ 2.33
Sh3rf1-201ENSMUST00000034060 Mroh3A0A1D5RM54 893 aa29.57■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 B4galnt3Q6L8S8 986 aa29.57■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 Rsf1E9PWW9 1441 aaKnown RBP29.56■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 PnnO35691 725 aaKnown RBP29.55■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 NacadQ5SWP3 1504 aa29.55■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 MccE9PWI3 1003 aa29.55■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 EspnQ9ET47 871 aa29.54■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 Mtus2Q3UHD3 1353 aa29.52■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 Iqcf3Q9D498 203 aa29.52■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 Gm20521D3Z5F7 333 aa29.51■■■□□ 2.32
Sh3rf1-201ENSMUST00000034060 Gm973E9Q295 1059 aa29.5■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 Spryd3E9Q9B3 442 aa29.5■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 Calcoco2A2A6M5 331 aa29.5■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 Rrp12Q6P5B0 1295 aaKnown RBP29.49■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 HnrnpuQ8VEK3 800 aaKnown RBP29.49■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 4933402E13RikQ9D4D2 429 aa29.49■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 Ccdc18Q640L5 1455 aa29.49■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 MsnP26041 577 aaKnown RBP29.48■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 Erich6bQ9D4S6 220 aa29.48■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 Kdm2aP59997 1161 aa29.48■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 Exosc9Q9JHI7 438 aaKnown RBP29.48■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 Chmp5Q9D7S9 219 aa29.46■■■□□ 2.31
Sh3rf1-201ENSMUST00000034060 Wwc2Q6NXJ0 1187 aa29.41■■■□□ 2.3
Sh3rf1-201ENSMUST00000034060 Gm6268A2A3U9 297 aa29.39■■■□□ 2.3
Sh3rf1-201ENSMUST00000034060 Kif15Q6P9L6 1387 aa29.38■■■□□ 2.29
Sh3rf1-201ENSMUST00000034060 Znf326O88291 580 aa29.38■■■□□ 2.29
Sh3rf1-201ENSMUST00000034060 Hsp90b1P08113 802 aaKnown RBP29.38■■■□□ 2.29
Sh3rf1-201ENSMUST00000034060 Armcx1Q9CX83 456 aa29.37■■■□□ 2.29
Sh3rf1-201ENSMUST00000034060 Slc4a3P16283 1227 aa29.37■■■□□ 2.29
Sh3rf1-201ENSMUST00000034060 Ipo8Q7TMY7 1010 aa29.36■■■□□ 2.29
Sh3rf1-201ENSMUST00000034060 Pes1Q9EQ61 584 aaKnown RBP29.35■■■□□ 2.29
Sh3rf1-201ENSMUST00000034060 Fhad1A6PWD2 1420 aa29.35■■■□□ 2.29
Sh3rf1-201ENSMUST00000034060 Hspa5P20029 655 aaKnown RBP29.31■■■□□ 2.28
Sh3rf1-201ENSMUST00000034060 Ddrgk1Q80WW9 315 aa29.31■■■□□ 2.28
Sh3rf1-201ENSMUST00000034060 Safb2Q80YR5 991 aaKnown RBP29.28■■■□□ 2.28
Sh3rf1-201ENSMUST00000034060 Mak16Q8BGS0 296 aaKnown RBP29.27■■■□□ 2.28
Sh3rf1-201ENSMUST00000034060 Zscan21Q07231 555 aa29.26■■■□□ 2.27
Sh3rf1-201ENSMUST00000034060 Pde3bQ61409 1100 aa29.25■■■□□ 2.27
Sh3rf1-201ENSMUST00000034060 Exoc6Q8R313 802 aa29.24■■■□□ 2.27
Sh3rf1-201ENSMUST00000034060 Stag3O70576 1240 aa29.23■■■□□ 2.27
Sh3rf1-201ENSMUST00000034060 Irx6Q9ER75 438 aa29.22■■■□□ 2.27
Sh3rf1-201ENSMUST00000034060 Znf316Q6PGE4 1016 aa29.21■■■□□ 2.27
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms