RNA–Protein interactions for RNA: ENSMUST00000029053.7

Ptpn1-201, Transcript of Tyrosine-protein phosphatase non-receptor type 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpn1, Length 4,213 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn1-201ENSMUST00000029053 Ccdc9Q8VC31 543 aaKnown RBP17.62■□□□□ 0.41
Ptpn1-201ENSMUST00000029053 Sycp2Q9CUU3 1500 aa17.62■□□□□ 0.41
Ptpn1-201ENSMUST00000029053 Znf710Q3U288 666 aa17.55■□□□□ 0.4
Ptpn1-201ENSMUST00000029053 Ccer2J3QPU5 274 aa17.54■□□□□ 0.4
Ptpn1-201ENSMUST00000029053 IbspQ61711 324 aa17.53■□□□□ 0.4
Ptpn1-201ENSMUST00000029053 ChgaP26339 463 aaKnown RBP17.52■□□□□ 0.4
Ptpn1-201ENSMUST00000029053 Mrs2Q5NCE8 434 aa17.51■□□□□ 0.39
Ptpn1-201ENSMUST00000029053 NeflP08551 543 aa17.46■□□□□ 0.39
Ptpn1-201ENSMUST00000029053 Spryd3E9Q9B3 442 aa17.46■□□□□ 0.39
Ptpn1-201ENSMUST00000029053 CanxP35564 591 aaKnown RBP17.45■□□□□ 0.38
Ptpn1-201ENSMUST00000029053 Ipo4Q8VI75 1082 aa17.45■□□□□ 0.38
Ptpn1-201ENSMUST00000029053 Ythdc1E9Q5K9 736 aaKnown RBP17.42■□□□□ 0.38
Ptpn1-201ENSMUST00000029053 Zfp777B9EKF4 885 aa17.42■□□□□ 0.38
Ptpn1-201ENSMUST00000029053 Rsf1E9PWW9 1441 aaKnown RBP17.39■□□□□ 0.37
Ptpn1-201ENSMUST00000029053 Ipo9Q91YE6 1041 aa17.39■□□□□ 0.37
Ptpn1-201ENSMUST00000029053 Sin3aQ60520 1274 aaKnown RBP17.37■□□□□ 0.37
Ptpn1-201ENSMUST00000029053 4930567H17RikQ3V0K5 233 aa17.33■□□□□ 0.36
Ptpn1-201ENSMUST00000029053 Crybg2B7ZCC2 1516 aa17.3■□□□□ 0.36
Ptpn1-201ENSMUST00000029053 Lmod3E9QA62 571 aa17.3■□□□□ 0.36
Ptpn1-201ENSMUST00000029053 B4galnt3Q6L8S8 986 aa17.26■□□□□ 0.35
Ptpn1-201ENSMUST00000029053 Wwc2Q6NXJ0 1187 aa17.26■□□□□ 0.35
Ptpn1-201ENSMUST00000029053 Dbr1Q923B1 550 aa17.25■□□□□ 0.35
Ptpn1-201ENSMUST00000029053 BicraF8VPZ9 1578 aa17.24■□□□□ 0.35
Ptpn1-201ENSMUST00000029053 Lmod2Q3UHZ5 550 aa17.23■□□□□ 0.35
Ptpn1-201ENSMUST00000029053 Anp32bQ9EST5 272 aaKnown RBP17.23■□□□□ 0.35
Ptpn1-201ENSMUST00000029053 Clip1Q922J3 1391 aa17.22■□□□□ 0.35
Ptpn1-201ENSMUST00000029053 AU015836B2RUM3 263 aa17.21■□□□□ 0.35
Ptpn1-201ENSMUST00000029053 Armcx1Q9CX83 456 aa17.2■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Kcnh8P59111 1102 aa17.19■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Rad21Q61550 635 aaKnown RBP17.19■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Smarca2Q6DIC0 1577 aa17.18■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 AampJ3QN89 436 aa17.18■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Tcerg1Q8CGF7 1100 aaKnown RBP17.18■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Vsig10D3YX43 558 aa17.17■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Dnttip2Q8R2M2 758 aaKnown RBP17.17■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Liat1Q810M6 228 aa17.17■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Iqcf3Q9D498 203 aa17.16■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Plppr3Q7TPB0 716 aa17.16■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Ofd1Q80Z25 1017 aa17.16■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Cecr2E9Q2Z1 1453 aa17.15■□□□□ 0.34
Ptpn1-201ENSMUST00000029053 Arhgap27A2AB59 869 aa17.11■□□□□ 0.33
Ptpn1-201ENSMUST00000029053 Hspa5P20029 655 aaKnown RBP17.1■□□□□ 0.33
Ptpn1-201ENSMUST00000029053 Ccdc88bQ4QRL3 1481 aa17.09■□□□□ 0.33
Ptpn1-201ENSMUST00000029053 Pdcl3Q8BVF2 240 aa17.09■□□□□ 0.33
Ptpn1-201ENSMUST00000029053 Sart3Q9JLI8 962 aaKnown RBP17.09■□□□□ 0.33
Ptpn1-201ENSMUST00000029053 Arid4bA2CG63 1314 aaKnown RBP17.07■□□□□ 0.32
Ptpn1-201ENSMUST00000029053 Egfem1Q8C088 590 aa17.06■□□□□ 0.32
Ptpn1-201ENSMUST00000029053 Washc2Q6PGL7 1334 aa17.04■□□□□ 0.32
Ptpn1-201ENSMUST00000029053 Trim30dE9PWL0 497 aa17.04■□□□□ 0.32
Ptpn1-201ENSMUST00000029053 Chrna2Q91X60 512 aa17.02■□□□□ 0.31
Ptpn1-201ENSMUST00000029053 DmtnQ9WV69 405 aa17.01■□□□□ 0.31
Ptpn1-201ENSMUST00000029053 Gtf3c5Q8R2T8 520 aa17.01■□□□□ 0.31
Ptpn1-201ENSMUST00000029053 Brd4Q9ESU6 1400 aaKnown RBP17■□□□□ 0.31
Ptpn1-201ENSMUST00000029053 Exoc6Q8R313 802 aa16.99■□□□□ 0.31
Ptpn1-201ENSMUST00000029053 Apbb1Q9QXJ1 710 aa16.98■□□□□ 0.31
Ptpn1-201ENSMUST00000029053 Hsp90ab1P11499 724 aaKnown RBP16.96■□□□□ 0.31
Ptpn1-201ENSMUST00000029053 Rpap1Q80TE0 1409 aa16.96■□□□□ 0.31
Ptpn1-201ENSMUST00000029053 Dnai1Q8C0M8 701 aa16.95■□□□□ 0.3
Ptpn1-201ENSMUST00000029053 Vgll3P85442 326 aa16.95■□□□□ 0.3
Ptpn1-201ENSMUST00000029053 NgefQ8CHT1 710 aa16.94■□□□□ 0.3
Ptpn1-201ENSMUST00000029053 Trim44Q9QXA7 346 aa16.94■□□□□ 0.3
Ptpn1-201ENSMUST00000029053 DekQ7TNV0 380 aaKnown RBP16.92■□□□□ 0.3
Ptpn1-201ENSMUST00000029053 TimelessQ9R1X4 1197 aa16.92■□□□□ 0.3
Ptpn1-201ENSMUST00000029053 Gm13697A2AK42 830 aa16.9■□□□□ 0.3
Ptpn1-201ENSMUST00000029053 Gtf2a1Q99PM3 378 aa16.9■□□□□ 0.3
Ptpn1-201ENSMUST00000029053 Trim26Q99PN3 545 aa16.88■□□□□ 0.29
Ptpn1-201ENSMUST00000029053 Gm6268A2A3U9 297 aa16.85■□□□□ 0.29
Ptpn1-201ENSMUST00000029053 Rbm10Q99KG3 930 aaKnown RBP16.85■□□□□ 0.29
Ptpn1-201ENSMUST00000029053 Smg6P61406 1418 aaKnown RBP16.85■□□□□ 0.29
Ptpn1-201ENSMUST00000029053 Tnnt2P50752 301 aa16.84■□□□□ 0.29
Ptpn1-201ENSMUST00000029053 Chic2Q9D9G3 165 aa16.84■□□□□ 0.29
Ptpn1-201ENSMUST00000029053 Plcb2A3KGF7 1181 aa16.83■□□□□ 0.29
Ptpn1-201ENSMUST00000029053 BccipQ9CWI3 316 aa16.83■□□□□ 0.29
Ptpn1-201ENSMUST00000029053 Rrp9Q91WM3 475 aaKnown RBP16.82■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Stard8Q8K031 1019 aa16.82■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Ppm1gQ61074 542 aa16.81■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Synj1Q8CHC4 1574 aa16.81■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Rangap1P46061 589 aaKnown RBP16.8■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Paxip1Q6NZQ4 1056 aa16.8■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 CftrP26361 1476 aa16.79■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Mroh3A0A1D5RM54 893 aa16.79■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Slc4a2P13808 1237 aaKnown RBP16.79■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Eif2s2Q99L45 331 aaKnown RBP16.79■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Polr3glQ8R0C0 218 aa16.78■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 SlkO54988 1233 aa16.78■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Chmp5Q9D7S9 219 aa16.78■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Smarca4Q3TKT4 1613 aaKnown RBP16.77■□□□□ 0.28
Ptpn1-201ENSMUST00000029053 Pds5bQ4VA53 1446 aaKnown RBP16.77■□□□□ 0.27
Ptpn1-201ENSMUST00000029053 Zfp91Q62511 572 aa16.77■□□□□ 0.27
Ptpn1-201ENSMUST00000029053 Kcnn1Q9EQR3 537 aa16.76■□□□□ 0.27
Ptpn1-201ENSMUST00000029053 Prdm10Q3UTQ7 1184 aa16.76■□□□□ 0.27
Ptpn1-201ENSMUST00000029053 Znf316Q6PGE4 1016 aa16.76■□□□□ 0.27
Ptpn1-201ENSMUST00000029053 Htatsf1Q8BGC0 757 aa16.75■□□□□ 0.27
Ptpn1-201ENSMUST00000029053 Ttll13A4Q9F6 804 aa16.72■□□□□ 0.27
Ptpn1-201ENSMUST00000029053 Atad2bE9Q166 1460 aaKnown RBP16.71■□□□□ 0.27
Ptpn1-201ENSMUST00000029053 Rrp12Q6P5B0 1295 aaKnown RBP16.71■□□□□ 0.26
Ptpn1-201ENSMUST00000029053 Fbxo2Q80UW2 297 aa16.7■□□□□ 0.26
Ptpn1-201ENSMUST00000029053 Erich6bQ9D4S6 220 aa16.7■□□□□ 0.26
Ptpn1-201ENSMUST00000029053 BlmO88700 1416 aa16.7■□□□□ 0.26
Ptpn1-201ENSMUST00000029053 Mre11Q61216 706 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms