RNA–Protein interactions for RNA: ENSMUST00000029053.7

Ptpn1-201, Transcript of Tyrosine-protein phosphatase non-receptor type 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpn1, Length 4,213 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn1-201ENSMUST00000029053 Ehmt2Q9Z148 1263 aaKnown RBP21.79■■□□□ 1.08
Ptpn1-201ENSMUST00000029053 Rpgrip1Q9EPQ2 1331 aa21.73■■□□□ 1.07
Ptpn1-201ENSMUST00000029053 Rhox8Q6VSS7 320 aa21.5■■□□□ 1.03
Ptpn1-201ENSMUST00000029053 Pcgf6Q99NA9 353 aa21.16■□□□□ 0.98
Ptpn1-201ENSMUST00000029053 Acin1Q9JIX8 1338 aaKnown RBP20.92■□□□□ 0.94
Ptpn1-201ENSMUST00000029053 Las1lA2BE28 776 aaKnown RBP20.78■□□□□ 0.92
Ptpn1-201ENSMUST00000029053 NischQ80TM9 1593 aa20.58■□□□□ 0.89
Ptpn1-201ENSMUST00000029053 Supt5hO55201 1082 aaKnown RBP20.58■□□□□ 0.89
Ptpn1-201ENSMUST00000029053 Zeb1Q64318 1117 aa20.55■□□□□ 0.88
Ptpn1-201ENSMUST00000029053 Neurod1Q60867 357 aa20.49■□□□□ 0.87
Ptpn1-201ENSMUST00000029053 CenpbP27790 599 aa20.34■□□□□ 0.85
Ptpn1-201ENSMUST00000029053 DiexfQ8BTT6 772 aaKnown RBP20.29■□□□□ 0.84
Ptpn1-201ENSMUST00000029053 Gm38655A0A286YDK6 273 aa20.09■□□□□ 0.81
Ptpn1-201ENSMUST00000029053 Csrnp3P59055 597 aa20.07■□□□□ 0.8
Ptpn1-201ENSMUST00000029053 1700123L14RikQ3V2K7 440 aa20.04■□□□□ 0.8
Ptpn1-201ENSMUST00000029053 Cngb1E1AZ71 1325 aa20.04■□□□□ 0.8
Ptpn1-201ENSMUST00000029053 Wdr66E9Q743 1299 aa20■□□□□ 0.79
Ptpn1-201ENSMUST00000029053 Gm35339A0A140LHH9 1649 aa19.99■□□□□ 0.79
Ptpn1-201ENSMUST00000029053 Ppargc1bQ8VHJ7 1014 aa19.86■□□□□ 0.77
Ptpn1-201ENSMUST00000029053 Myt1Q8CFC2 1127 aa19.83■□□□□ 0.77
Ptpn1-201ENSMUST00000029053 Abcc9P70170 1546 aa19.8■□□□□ 0.76
Ptpn1-201ENSMUST00000029053 Bcl11aQ9QYE3 773 aa19.64■□□□□ 0.73
Ptpn1-201ENSMUST00000029053 Ccdc136Q3TVA9 1136 aa19.6■□□□□ 0.73
Ptpn1-201ENSMUST00000029053 Amer1Q7TS75 1132 aa19.59■□□□□ 0.73
Ptpn1-201ENSMUST00000029053 Abcc8B2RUS7 1588 aa19.57■□□□□ 0.72
Ptpn1-201ENSMUST00000029053 Sall2Q9QX96 1004 aa19.57■□□□□ 0.72
Ptpn1-201ENSMUST00000029053 Cdk11bP24788 784 aaKnown RBP19.53■□□□□ 0.72
Ptpn1-201ENSMUST00000029053 Ttbk1Q6PCN3 1308 aa19.52■□□□□ 0.72
Ptpn1-201ENSMUST00000029053 Anks4bQ8K3X6 423 aa19.5■□□□□ 0.71
Ptpn1-201ENSMUST00000029053 Trim41Q5NCC3 630 aa19.46■□□□□ 0.71
Ptpn1-201ENSMUST00000029053 Nop58Q6DFW4 536 aaKnown RBP19.44■□□□□ 0.7
Ptpn1-201ENSMUST00000029053 Ccdc180J3QNE4 1664 aa19.4■□□□□ 0.7
Ptpn1-201ENSMUST00000029053 Gab3Q8BSM5 595 aa19.35■□□□□ 0.69
Ptpn1-201ENSMUST00000029053 PrkcshO08795 521 aa19.32■□□□□ 0.68
Ptpn1-201ENSMUST00000029053 Aplp2Q06335 707 aa19.32■□□□□ 0.68
Ptpn1-201ENSMUST00000029053 Mapk8ip2Q9ERE9 830 aa19.29■□□□□ 0.68
Ptpn1-201ENSMUST00000029053 NefmP08553 848 aa19.25■□□□□ 0.67
Ptpn1-201ENSMUST00000029053 Fam71e1A1L3C1 212 aa19.19■□□□□ 0.66
Ptpn1-201ENSMUST00000029053 Ifnlr1Q8CGK5 535 aa19.09■□□□□ 0.65
Ptpn1-201ENSMUST00000029053 HrcG5E8J6 738 aa19.07■□□□□ 0.64
Ptpn1-201ENSMUST00000029053 Mier1Q5UAK0 511 aa19.07■□□□□ 0.64
Ptpn1-201ENSMUST00000029053 Pelp1Q9DBD5 1123 aaKnown RBP18.99■□□□□ 0.63
Ptpn1-201ENSMUST00000029053 UbtfP25976 765 aaKnown RBP18.99■□□□□ 0.63
Ptpn1-201ENSMUST00000029053 SafbD3YXK2 937 aaKnown RBP18.95■□□□□ 0.62
Ptpn1-201ENSMUST00000029053 Dcaf1Q80TR8 1506 aa18.95■□□□□ 0.62
Ptpn1-201ENSMUST00000029053 Aebp2Q9Z248 504 aaKnown RBP18.9■□□□□ 0.62
Ptpn1-201ENSMUST00000029053 Rtl1Q7M732 1744 aa18.89■□□□□ 0.61
Ptpn1-201ENSMUST00000029053 Slc24a1Q91WD8 1130 aa18.82■□□□□ 0.6
Ptpn1-201ENSMUST00000029053 Ap3b1Q9Z1T1 1105 aa18.82■□□□□ 0.6
Ptpn1-201ENSMUST00000029053 ClspnQ80YR7 1315 aa18.7■□□□□ 0.58
Ptpn1-201ENSMUST00000029053 Hnrnpul2Q00PI9 745 aaKnown RBP18.67■□□□□ 0.58
Ptpn1-201ENSMUST00000029053 Anp32aO35381 247 aa18.61■□□□□ 0.57
Ptpn1-201ENSMUST00000029053 Tnnt3Q9QZ47 272 aa18.61■□□□□ 0.57
Ptpn1-201ENSMUST00000029053 4933416C03RikQ3V063 378 aa18.54■□□□□ 0.56
Ptpn1-201ENSMUST00000029053 Eif5bQ05D44 1216 aaKnown RBP18.48■□□□□ 0.55
Ptpn1-201ENSMUST00000029053 TonslQ6NZL6 1363 aa18.44■□□□□ 0.54
Ptpn1-201ENSMUST00000029053 Myt1lP97500 1187 aa18.44■□□□□ 0.54
Ptpn1-201ENSMUST00000029053 ScribQ80U72 1612 aa18.43■□□□□ 0.54
Ptpn1-201ENSMUST00000029053 Rtl5Q5DTT4 599 aa18.39■□□□□ 0.53
Ptpn1-201ENSMUST00000029053 Hdac5Q9Z2V6 1113 aa18.37■□□□□ 0.53
Ptpn1-201ENSMUST00000029053 Ppp4r2Q0VGB7 417 aa18.28■□□□□ 0.52
Ptpn1-201ENSMUST00000029053 DaxxO35613 739 aa18.25■□□□□ 0.51
Ptpn1-201ENSMUST00000029053 Eid3Q3V124 375 aa18.23■□□□□ 0.51
Ptpn1-201ENSMUST00000029053 Calr4Q3TQS0 420 aa18.23■□□□□ 0.51
Ptpn1-201ENSMUST00000029053 Stra8P70278 393 aa18.22■□□□□ 0.51
Ptpn1-201ENSMUST00000029053 Pknox2Q8BG99 474 aa18.19■□□□□ 0.5
Ptpn1-201ENSMUST00000029053 Nolc1E9Q5C9 702 aaKnown RBP18.18■□□□□ 0.5
Ptpn1-201ENSMUST00000029053 Il27Q8K3I6 234 aa18.15■□□□□ 0.5
Ptpn1-201ENSMUST00000029053 Plcd4Q8K3R3 807 aa18.15■□□□□ 0.5
Ptpn1-201ENSMUST00000029053 Kdm5dQ62240 1548 aa18.11■□□□□ 0.49
Ptpn1-201ENSMUST00000029053 Zcchc6Q5BLK4 1491 aaKnown RBP18.08■□□□□ 0.48
Ptpn1-201ENSMUST00000029053 Chic1Q8CBW7 227 aa18.06■□□□□ 0.48
Ptpn1-201ENSMUST00000029053 NclP09405 707 aaKnown RBP18.06■□□□□ 0.48
Ptpn1-201ENSMUST00000029053 Gtf3c3Q3TMP1 882 aa18.05■□□□□ 0.48
Ptpn1-201ENSMUST00000029053 Supt16hQ920B9 1047 aa18.05■□□□□ 0.48
Ptpn1-201ENSMUST00000029053 NacadQ5SWP3 1504 aa18.03■□□□□ 0.48
Ptpn1-201ENSMUST00000029053 Irx3P81067 507 aa18■□□□□ 0.47
Ptpn1-201ENSMUST00000029053 Taok2Q6ZQ29 1240 aa17.99■□□□□ 0.47
Ptpn1-201ENSMUST00000029053 Rb1cc1Q9ESK9 1588 aa17.99■□□□□ 0.47
Ptpn1-201ENSMUST00000029053 Esf1Q3V1V3 845 aaKnown RBP17.99■□□□□ 0.47
Ptpn1-201ENSMUST00000029053 Wdr43Q6ZQL4 677 aaKnown RBP17.99■□□□□ 0.47
Ptpn1-201ENSMUST00000029053 Ube2uB1AUC4 352 aa17.96■□□□□ 0.47
Ptpn1-201ENSMUST00000029053 Upf2A2AT37 1269 aaKnown RBP17.96■□□□□ 0.46
Ptpn1-201ENSMUST00000029053 P3h3Q8CG70 732 aa17.95■□□□□ 0.46
Ptpn1-201ENSMUST00000029053 Slc4a3P16283 1227 aa17.92■□□□□ 0.46
Ptpn1-201ENSMUST00000029053 Hsp90aa1P07901 733 aaKnown RBP17.91■□□□□ 0.46
Ptpn1-201ENSMUST00000029053 Plekhg3Q4VAC9 1341 aa17.91■□□□□ 0.46
Ptpn1-201ENSMUST00000029053 Ccdc27Q3V036 639 aa17.91■□□□□ 0.46
Ptpn1-201ENSMUST00000029053 Zbtb7cQ8VCZ7 619 aa17.91■□□□□ 0.46
Ptpn1-201ENSMUST00000029053 Zbtb4Q5F293 982 aa17.9■□□□□ 0.46
Ptpn1-201ENSMUST00000029053 Npm2Q80W85 207 aa17.9■□□□□ 0.46
Ptpn1-201ENSMUST00000029053 Cep164Q5DU05 1446 aa17.87■□□□□ 0.45
Ptpn1-201ENSMUST00000029053 Rtn4Q99P72 1162 aaKnown RBP17.82■□□□□ 0.44
Ptpn1-201ENSMUST00000029053 Fgd1P52734 960 aa17.78■□□□□ 0.44
Ptpn1-201ENSMUST00000029053 NrdcQ8BHG1 1161 aa17.78■□□□□ 0.44
Ptpn1-201ENSMUST00000029053 Pak3Q61036 559 aa17.73■□□□□ 0.43
Ptpn1-201ENSMUST00000029053 Fam50aQ9WV03 339 aaKnown RBP17.7■□□□□ 0.42
Ptpn1-201ENSMUST00000029053 ArxO35085 564 aa17.7■□□□□ 0.42
Ptpn1-201ENSMUST00000029053 Znf692Q3U381 531 aa17.7■□□□□ 0.42
Ptpn1-201ENSMUST00000029053 Baz1aO88379 1555 aa17.69■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms