RNA–Protein interactions for RNA: ENSMUST00000022356.11

Usp54-201, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-201ENSMUST00000022356 Crybg2B7ZCC2 1516 aa10.82□□□□□ -0.68
Usp54-201ENSMUST00000022356 Iqcf3Q9D498 203 aa10.82□□□□□ -0.68
Usp54-201ENSMUST00000022356 Upf2A2AT37 1269 aaKnown RBP10.81□□□□□ -0.68
Usp54-201ENSMUST00000022356 Eea1Q8BL66 1411 aa10.79□□□□□ -0.68
Usp54-201ENSMUST00000022356 Cux2P70298 1426 aa10.79□□□□□ -0.68
Usp54-201ENSMUST00000022356 Znf326O88291 580 aa10.78□□□□□ -0.68
Usp54-201ENSMUST00000022356 Rrp7aQ9D1C9 280 aaKnown RBP10.77□□□□□ -0.69
Usp54-201ENSMUST00000022356 Exosc9Q9JHI7 438 aaKnown RBP10.77□□□□□ -0.69
Usp54-201ENSMUST00000022356 Hmgb2P30681 210 aaKnown RBP10.76□□□□□ -0.69
Usp54-201ENSMUST00000022356 Mroh3A0A1D5RM54 893 aa10.75□□□□□ -0.69
Usp54-201ENSMUST00000022356 Zbtb4Q5F293 982 aa10.75□□□□□ -0.69
Usp54-201ENSMUST00000022356 Smarca2Q6DIC0 1577 aa10.75□□□□□ -0.69
Usp54-201ENSMUST00000022356 Arid4bA2CG63 1314 aaKnown RBP10.74□□□□□ -0.69
Usp54-201ENSMUST00000022356 Chic2Q9D9G3 165 aa10.74□□□□□ -0.69
Usp54-201ENSMUST00000022356 Gm20521D3Z5F7 333 aa10.73□□□□□ -0.69
Usp54-201ENSMUST00000022356 Grwd1Q810D6 446 aaKnown RBP10.73□□□□□ -0.69
Usp54-201ENSMUST00000022356 Kif27Q7M6Z4 1394 aa10.73□□□□□ -0.69
Usp54-201ENSMUST00000022356 Prdm10Q3UTQ7 1184 aa10.73□□□□□ -0.69
Usp54-201ENSMUST00000022356 Polr3glQ8R0C0 218 aa10.73□□□□□ -0.69
Usp54-201ENSMUST00000022356 Fmn1Q05860 1466 aa10.73□□□□□ -0.69
Usp54-201ENSMUST00000022356 WrnO09053 1401 aa10.72□□□□□ -0.69
Usp54-201ENSMUST00000022356 Fgd1P52734 960 aa10.72□□□□□ -0.69
Usp54-201ENSMUST00000022356 Psme1P97371 249 aa10.71□□□□□ -0.69
Usp54-201ENSMUST00000022356 Chmp4bQ9D8B3 224 aaKnown RBP10.7□□□□□ -0.7
Usp54-201ENSMUST00000022356 Arid3cA6PWV5 409 aa10.69□□□□□ -0.7
Usp54-201ENSMUST00000022356 Stag3O70576 1240 aa10.69□□□□□ -0.7
Usp54-201ENSMUST00000022356 Mia2Q91ZV0 1396 aa10.68□□□□□ -0.7
Usp54-201ENSMUST00000022356 Fbln2P37889 1221 aa10.67□□□□□ -0.7
Usp54-201ENSMUST00000022356 Smarca4Q3TKT4 1613 aaKnown RBP10.67□□□□□ -0.7
Usp54-201ENSMUST00000022356 ClspnQ80YR7 1315 aa10.67□□□□□ -0.7
Usp54-201ENSMUST00000022356 Mier1Q5UAK0 511 aa10.66□□□□□ -0.7
Usp54-201ENSMUST00000022356 Hsp90aa1P07901 733 aaKnown RBP10.66□□□□□ -0.7
Usp54-201ENSMUST00000022356 Rpap1Q80TE0 1409 aa10.65□□□□□ -0.7
Usp54-201ENSMUST00000022356 Ccnb3Q810T2 1396 aa10.65□□□□□ -0.71
Usp54-201ENSMUST00000022356 Aplp2Q06335 707 aa10.64□□□□□ -0.71
Usp54-201ENSMUST00000022356 Ncoa2Q61026 1462 aa10.64□□□□□ -0.71
Usp54-201ENSMUST00000022356 Txndc2Q6P902 515 aa10.64□□□□□ -0.71
Usp54-201ENSMUST00000022356 Stk24Q99KH8 431 aa10.63□□□□□ -0.71
Usp54-201ENSMUST00000022356 Nop58Q6DFW4 536 aaKnown RBP10.63□□□□□ -0.71
Usp54-201ENSMUST00000022356 Cwc22Q8C5N3 908 aaKnown RBP10.63□□□□□ -0.71
Usp54-201ENSMUST00000022356 Soga1E1U8D0 1418 aa10.63□□□□□ -0.71
Usp54-201ENSMUST00000022356 Mapk8ip3Q9ESN9 1337 aa10.62□□□□□ -0.71
Usp54-201ENSMUST00000022356 Amer1Q7TS75 1132 aa10.62□□□□□ -0.71
Usp54-201ENSMUST00000022356 NgefQ8CHT1 710 aa10.61□□□□□ -0.71
Usp54-201ENSMUST00000022356 NudcO35685 332 aaKnown RBP10.6□□□□□ -0.71
Usp54-201ENSMUST00000022356 Baz1bQ9Z277 1479 aa10.6□□□□□ -0.71
Usp54-201ENSMUST00000022356 Stard8Q8K031 1019 aa10.59□□□□□ -0.71
Usp54-201ENSMUST00000022356 Kdm2aP59997 1161 aa10.58□□□□□ -0.72
Usp54-201ENSMUST00000022356 LrpprcQ6PB66 1392 aaKnown RBP10.58□□□□□ -0.72
Usp54-201ENSMUST00000022356 Carmil1Q6EDY6 1374 aa10.57□□□□□ -0.72
Usp54-201ENSMUST00000022356 Dnai2A2AC93 623 aa10.57□□□□□ -0.72
Usp54-201ENSMUST00000022356 Rtl5Q5DTT4 599 aa10.57□□□□□ -0.72
Usp54-201ENSMUST00000022356 Gm6268A2A3U9 297 aa10.56□□□□□ -0.72
Usp54-201ENSMUST00000022356 Egfem1Q8C088 590 aa10.56□□□□□ -0.72
Usp54-201ENSMUST00000022356 Rgl3Q3UYI5 709 aa10.55□□□□□ -0.72
Usp54-201ENSMUST00000022356 4933416C03RikQ3V063 378 aa10.54□□□□□ -0.72
Usp54-201ENSMUST00000022356 Rab11fip3Q8CHD8 1047 aa10.54□□□□□ -0.72
Usp54-201ENSMUST00000022356 Ap3b2Q9JME5 1082 aa10.54□□□□□ -0.72
Usp54-201ENSMUST00000022356 CntlnA2AM05 1397 aa10.53□□□□□ -0.72
Usp54-201ENSMUST00000022356 Dhx29Q6PGC1 1365 aaKnown RBP10.53□□□□□ -0.72
Usp54-201ENSMUST00000022356 Sf3b2Q3UJB0 878 aaKnown RBP10.53□□□□□ -0.72
Usp54-201ENSMUST00000022356 Ppm1fQ8CGA0 452 aa10.53□□□□□ -0.72
Usp54-201ENSMUST00000022356 Map4P27546 1125 aaKnown RBP10.52□□□□□ -0.73
Usp54-201ENSMUST00000022356 Bcl11bQ99PV8 884 aa10.52□□□□□ -0.73
Usp54-201ENSMUST00000022356 Mrc2Q64449 1479 aa10.52□□□□□ -0.73
Usp54-201ENSMUST00000022356 Fyco1Q8VDC1 1437 aa10.52□□□□□ -0.73
Usp54-201ENSMUST00000022356 Cyb5rlB1AS42 316 aa10.51□□□□□ -0.73
Usp54-201ENSMUST00000022356 Rtf1A2AQ19 715 aaKnown RBP10.51□□□□□ -0.73
Usp54-201ENSMUST00000022356 Pde3bQ61409 1100 aa10.51□□□□□ -0.73
Usp54-201ENSMUST00000022356 Nol10Q5RJG1 687 aaKnown RBP10.51□□□□□ -0.73
Usp54-201ENSMUST00000022356 Card11Q8CIS0 1159 aa10.5□□□□□ -0.73
Usp54-201ENSMUST00000022356 Q8BT18 775 aa10.49□□□□□ -0.73
Usp54-201ENSMUST00000022356 Iqgap2Q3UQ44 1575 aa10.49□□□□□ -0.73
Usp54-201ENSMUST00000022356 Cttnbp2B9EJA2 1648 aa10.49□□□□□ -0.73
Usp54-201ENSMUST00000022356 Aebp1Q640N1 1128 aa10.49□□□□□ -0.73
Usp54-201ENSMUST00000022356 Fhad1A6PWD2 1420 aa10.49□□□□□ -0.73
Usp54-201ENSMUST00000022356 CftrP26361 1476 aa10.48□□□□□ -0.73
Usp54-201ENSMUST00000022356 Aebp2Q9Z248 504 aaKnown RBP10.48□□□□□ -0.73
Usp54-201ENSMUST00000022356 Polr1aO35134 1717 aaKnown RBP10.47□□□□□ -0.73
Usp54-201ENSMUST00000022356 Fgd6Q69ZL1 1399 aa10.47□□□□□ -0.73
Usp54-201ENSMUST00000022356 Gtf2e1Q9D0D5 440 aa10.47□□□□□ -0.73
Usp54-201ENSMUST00000022356 Kif3bQ61771 747 aa10.46□□□□□ -0.73
Usp54-201ENSMUST00000022356 Atf3Q60765 181 aa10.46□□□□□ -0.74
Usp54-201ENSMUST00000022356 CenpjQ569L8 1344 aa10.45□□□□□ -0.74
Usp54-201ENSMUST00000022356 Plekhh2Q8C115 1491 aa10.45□□□□□ -0.74
Usp54-201ENSMUST00000022356 Jph4Q80WT0 628 aa10.45□□□□□ -0.74
Usp54-201ENSMUST00000022356 CadpsQ80TJ1 1355 aa10.44□□□□□ -0.74
Usp54-201ENSMUST00000022356 Irx6Q9ER75 438 aa10.43□□□□□ -0.74
Usp54-201ENSMUST00000022356 Cecr2E9Q2Z1 1453 aa10.43□□□□□ -0.74
Usp54-201ENSMUST00000022356 Ift140E9PY46 1464 aa10.42□□□□□ -0.74
Usp54-201ENSMUST00000022356 Shroom4Q1W617 1475 aa10.42□□□□□ -0.74
Usp54-201ENSMUST00000022356 Spag9Q58A65 1321 aaKnown RBP10.42□□□□□ -0.74
Usp54-201ENSMUST00000022356 Cc2d2bA0A286YDU8 1405 aa10.41□□□□□ -0.74
Usp54-201ENSMUST00000022356 Urb2E9Q7L1 1524 aaKnown RBP10.4□□□□□ -0.74
Usp54-201ENSMUST00000022356 Eid3Q3V124 375 aa10.39□□□□□ -0.75
Usp54-201ENSMUST00000022356 Nup155Q99P88 1391 aaKnown RBP10.39□□□□□ -0.75
Usp54-201ENSMUST00000022356 HnrnpuQ8VEK3 800 aaKnown RBP10.38□□□□□ -0.75
Usp54-201ENSMUST00000022356 Ccdc88bQ4QRL3 1481 aa10.38□□□□□ -0.75
Usp54-201ENSMUST00000022356 Arhgap35Q91YM2 1499 aa10.38□□□□□ -0.75
Usp54-201ENSMUST00000022356 Sirt1Q923E4 737 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms