RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Gm38655A0A286YDK6 273 aa16.47■□□□□ 0.23
Ldb3-201ENSMUST00000022327 Wdr43Q6ZQL4 677 aaKnown RBP16.47■□□□□ 0.23
Ldb3-201ENSMUST00000022327 DiexfQ8BTT6 772 aaKnown RBP16.45■□□□□ 0.22
Ldb3-201ENSMUST00000022327 Ccdc18Q640L5 1455 aa16.45■□□□□ 0.22
Ldb3-201ENSMUST00000022327 Ercc6F8VPZ5 1481 aa16.39■□□□□ 0.21
Ldb3-201ENSMUST00000022327 Kdm5dQ62240 1548 aa16.38■□□□□ 0.21
Ldb3-201ENSMUST00000022327 Rad21Q61550 635 aaKnown RBP16.37■□□□□ 0.21
Ldb3-201ENSMUST00000022327 Aebp2Q9Z248 504 aaKnown RBP16.35■□□□□ 0.21
Ldb3-201ENSMUST00000022327 Rgl3Q3UYI5 709 aa16.33■□□□□ 0.2
Ldb3-201ENSMUST00000022327 Mia2Q91ZV0 1396 aa16.32■□□□□ 0.2
Ldb3-201ENSMUST00000022327 Cwc22Q8C5N3 908 aaKnown RBP16.32■□□□□ 0.2
Ldb3-201ENSMUST00000022327 Ccdc9Q8VC31 543 aaKnown RBP16.31■□□□□ 0.2
Ldb3-201ENSMUST00000022327 ArxO35085 564 aa16.3■□□□□ 0.2
Ldb3-201ENSMUST00000022327 Ofd1Q80Z25 1017 aa16.24■□□□□ 0.19
Ldb3-201ENSMUST00000022327 Card11Q8CIS0 1159 aa16.21■□□□□ 0.19
Ldb3-201ENSMUST00000022327 Mtus2Q3UHD3 1353 aa16.21■□□□□ 0.18
Ldb3-201ENSMUST00000022327 Fmn1Q05860 1466 aa16.2■□□□□ 0.18
Ldb3-201ENSMUST00000022327 Hsp90aa1P07901 733 aaKnown RBP16.18■□□□□ 0.18
Ldb3-201ENSMUST00000022327 Arhgap27A2AB59 869 aa16.17■□□□□ 0.18
Ldb3-201ENSMUST00000022327 IqubQ8CDK3 788 aa16.16■□□□□ 0.18
Ldb3-201ENSMUST00000022327 Cep162Q6ZQ06 1403 aa16.16■□□□□ 0.18
Ldb3-201ENSMUST00000022327 1700123L14RikQ3V2K7 440 aa16.15■□□□□ 0.18
Ldb3-201ENSMUST00000022327 Mroh3A0A1D5RM54 893 aa16.15■□□□□ 0.18
Ldb3-201ENSMUST00000022327 Rangap1P46061 589 aaKnown RBP16.14■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Fgd1P52734 960 aa16.14■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Grwd1Q810D6 446 aaKnown RBP16.14■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Pds5bQ4VA53 1446 aaKnown RBP16.13■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Ccdc88bQ4QRL3 1481 aa16.12■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Srpk2O54781 681 aaKnown RBP16.12■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Crybg2B7ZCC2 1516 aa16.12■□□□□ 0.17
Ldb3-201ENSMUST00000022327 CanxP35564 591 aaKnown RBP16.11■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Hsp90ab1P11499 724 aaKnown RBP16.09■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Safb2Q80YR5 991 aaKnown RBP16.09■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Trim30dE9PWL0 497 aa16.08■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Kdm2aP59997 1161 aa16.08■□□□□ 0.17
Ldb3-201ENSMUST00000022327 Gm20521D3Z5F7 333 aa16.07■□□□□ 0.16
Ldb3-201ENSMUST00000022327 Rrp7aQ9D1C9 280 aaKnown RBP16.07■□□□□ 0.16
Ldb3-201ENSMUST00000022327 Plppr3Q7TPB0 716 aa16.05■□□□□ 0.16
Ldb3-201ENSMUST00000022327 P3h3Q8CG70 732 aa16.05■□□□□ 0.16
Ldb3-201ENSMUST00000022327 Fam71e1A1L3C1 212 aa16.04■□□□□ 0.16
Ldb3-201ENSMUST00000022327 Trim26Q99PN3 545 aa16.03■□□□□ 0.16
Ldb3-201ENSMUST00000022327 Kif27Q7M6Z4 1394 aa16.03■□□□□ 0.16
Ldb3-201ENSMUST00000022327 DekQ7TNV0 380 aaKnown RBP16.02■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Fyco1Q8VDC1 1437 aa16.02■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Chmp4bQ9D8B3 224 aaKnown RBP16.02■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Hspa5P20029 655 aaKnown RBP16.01■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Exosc9Q9JHI7 438 aaKnown RBP16.01■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Htatsf1Q8BGC0 757 aa16■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Sycp2Q9CUU3 1500 aa16■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Ppm1gQ61074 542 aa16■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Zfp777B9EKF4 885 aa16■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Mbd3Q9Z2D8 285 aaKnown RBP16■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Mapk8ip3Q9ESN9 1337 aa16■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Ccdc27Q3V036 639 aa15.98■□□□□ 0.15
Ldb3-201ENSMUST00000022327 CntlnA2AM05 1397 aa15.98■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Trim44Q9QXA7 346 aa15.97■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Aebp1Q640N1 1128 aa15.97■□□□□ 0.15
Ldb3-201ENSMUST00000022327 Pkd2O35245 966 aa15.96■□□□□ 0.14
Ldb3-201ENSMUST00000022327 Arhgap35Q91YM2 1499 aa15.95■□□□□ 0.14
Ldb3-201ENSMUST00000022327 CftrP26361 1476 aa15.94■□□□□ 0.14
Ldb3-201ENSMUST00000022327 NudcO35685 332 aaKnown RBP15.94■□□□□ 0.14
Ldb3-201ENSMUST00000022327 Map4P27546 1125 aaKnown RBP15.93■□□□□ 0.14
Ldb3-201ENSMUST00000022327 Map7O88735 730 aa15.92■□□□□ 0.14
Ldb3-201ENSMUST00000022327 Neurod2Q62414 383 aa15.91■□□□□ 0.14
Ldb3-201ENSMUST00000022327 Iqcf3Q9D498 203 aa15.91■□□□□ 0.14
Ldb3-201ENSMUST00000022327 Baz1bQ9Z277 1479 aa15.91■□□□□ 0.14
Ldb3-201ENSMUST00000022327 Stag3O70576 1240 aa15.9■□□□□ 0.14
Ldb3-201ENSMUST00000022327 Arid4bA2CG63 1314 aaKnown RBP15.89■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Fhad1A6PWD2 1420 aa15.89■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Apbb1Q9QXJ1 710 aa15.89■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Wwc2Q6NXJ0 1187 aa15.89■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Stk24Q99KH8 431 aa15.89■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Rundc1Q0VDN7 615 aa15.88■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Rwdd1Q9CQK7 243 aa15.88■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Smarca2Q6DIC0 1577 aa15.86■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Mphosph9A6H5Y1 991 aa15.86■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Tcerg1Q8CGF7 1100 aaKnown RBP15.85■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Vsig10D3YX43 558 aa15.84■□□□□ 0.13
Ldb3-201ENSMUST00000022327 Carmil1Q6EDY6 1374 aa15.83■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Dhx57Q6P5D3 1388 aaKnown RBP15.83■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Plcb2A3KGF7 1181 aa15.81■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Cabp1Q9JLK7 227 aa15.81■□□□□ 0.12
Ldb3-201ENSMUST00000022327 CatipB9EKE5 520 aa15.81■□□□□ 0.12
Ldb3-201ENSMUST00000022327 PtmaP26350 111 aa15.81■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Rpap1Q80TE0 1409 aa15.81■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Tmf1B9EKI3 1091 aa15.81■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Zscan21Q07231 555 aa15.81■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Exoc6Q8R313 802 aa15.79■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Gm6268A2A3U9 297 aa15.79■□□□□ 0.12
Ldb3-201ENSMUST00000022327 KnstrnQ9D9Z1 312 aaKnown RBP15.79■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Trak1Q6PD31 939 aa15.78■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Gtf2e1Q9D0D5 440 aa15.78■□□□□ 0.12
Ldb3-201ENSMUST00000022327 SafbD3YXK2 937 aaKnown RBP15.78■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Cux2P70298 1426 aa15.77■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Mak16Q8BGS0 296 aaKnown RBP15.77■□□□□ 0.12
Ldb3-201ENSMUST00000022327 Cecr2E9Q2Z1 1453 aa15.76■□□□□ 0.11
Ldb3-201ENSMUST00000022327 Rapgef2Q8CHG7 1496 aa15.75■□□□□ 0.11
Ldb3-201ENSMUST00000022327 Dbr1Q923B1 550 aa15.75■□□□□ 0.11
Ldb3-201ENSMUST00000022327 Sin3aQ60520 1274 aaKnown RBP15.75■□□□□ 0.11
Ldb3-201ENSMUST00000022327 Ifit1bl1D3Z6F0 470 aa15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 59.8 ms