RNA–Protein interactions for RNA: ENSMUST00000020877.8

Twistnb-201, Transcript of DNA-directed RNA polymerase I subunit RPA43, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Twistnb, Length 4,325 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Twistnb-201ENSMUST00000020877 Smarca2Q6DIC0 1577 aa17.64■□□□□ 0.41
Twistnb-201ENSMUST00000020877 Slc4a3P16283 1227 aa17.63■□□□□ 0.41
Twistnb-201ENSMUST00000020877 Os9Q8K2C7 672 aa17.63■□□□□ 0.41
Twistnb-201ENSMUST00000020877 Rad21Q61550 635 aaKnown RBP17.61■□□□□ 0.41
Twistnb-201ENSMUST00000020877 Wwc2Q6NXJ0 1187 aa17.6■□□□□ 0.41
Twistnb-201ENSMUST00000020877 ArxO35085 564 aa17.59■□□□□ 0.41
Twistnb-201ENSMUST00000020877 Nolc1E9Q5C9 702 aaKnown RBP17.58■□□□□ 0.41
Twistnb-201ENSMUST00000020877 Prdm10Q3UTQ7 1184 aa17.58■□□□□ 0.41
Twistnb-201ENSMUST00000020877 Rapgef2Q8CHG7 1496 aa17.58■□□□□ 0.4
Twistnb-201ENSMUST00000020877 Supt16hQ920B9 1047 aa17.53■□□□□ 0.4
Twistnb-201ENSMUST00000020877 CftrP26361 1476 aa17.52■□□□□ 0.4
Twistnb-201ENSMUST00000020877 Gm13697A2AK42 830 aa17.51■□□□□ 0.39
Twistnb-201ENSMUST00000020877 Ofd1Q80Z25 1017 aa17.51■□□□□ 0.39
Twistnb-201ENSMUST00000020877 Fkbp15Q6P9Q6 1216 aaKnown RBP17.5■□□□□ 0.39
Twistnb-201ENSMUST00000020877 Rgl3Q3UYI5 709 aa17.49■□□□□ 0.39
Twistnb-201ENSMUST00000020877 Synj1Q8CHC4 1574 aa17.49■□□□□ 0.39
Twistnb-201ENSMUST00000020877 Kif15Q6P9L6 1387 aa17.49■□□□□ 0.39
Twistnb-201ENSMUST00000020877 Crybg2B7ZCC2 1516 aa17.46■□□□□ 0.39
Twistnb-201ENSMUST00000020877 Ubl4bQ9CQ84 188 aa17.46■□□□□ 0.39
Twistnb-201ENSMUST00000020877 Sycp2Q9CUU3 1500 aa17.45■□□□□ 0.38
Twistnb-201ENSMUST00000020877 Fmn1Q05860 1466 aa17.44■□□□□ 0.38
Twistnb-201ENSMUST00000020877 4930567H17RikQ3V0K5 233 aa17.44■□□□□ 0.38
Twistnb-201ENSMUST00000020877 Grwd1Q810D6 446 aaKnown RBP17.4■□□□□ 0.38
Twistnb-201ENSMUST00000020877 Erich6D3Z6S9 713 aa17.4■□□□□ 0.38
Twistnb-201ENSMUST00000020877 Ifnlr1Q8CGK5 535 aa17.39■□□□□ 0.37
Twistnb-201ENSMUST00000020877 Polr3glQ8R0C0 218 aa17.38■□□□□ 0.37
Twistnb-201ENSMUST00000020877 Hsp90aa1P07901 733 aaKnown RBP17.37■□□□□ 0.37
Twistnb-201ENSMUST00000020877 Exoc6Q8R313 802 aa17.37■□□□□ 0.37
Twistnb-201ENSMUST00000020877 Znf710Q3U288 666 aa17.37■□□□□ 0.37
Twistnb-201ENSMUST00000020877 Baz1bQ9Z277 1479 aa17.36■□□□□ 0.37
Twistnb-201ENSMUST00000020877 Ccdc27Q3V036 639 aa17.35■□□□□ 0.37
Twistnb-201ENSMUST00000020877 CanxP35564 591 aaKnown RBP17.32■□□□□ 0.36
Twistnb-201ENSMUST00000020877 Nlrp6Q91WS2 869 aa17.31■□□□□ 0.36
Twistnb-201ENSMUST00000020877 Rangap1P46061 589 aaKnown RBP17.3■□□□□ 0.36
Twistnb-201ENSMUST00000020877 Apbb1Q9QXJ1 710 aa17.28■□□□□ 0.36
Twistnb-201ENSMUST00000020877 PrkcshO08795 521 aa17.28■□□□□ 0.36
Twistnb-201ENSMUST00000020877 Dbr1Q923B1 550 aa17.27■□□□□ 0.36
Twistnb-201ENSMUST00000020877 Mia2Q91ZV0 1396 aa17.26■□□□□ 0.35
Twistnb-201ENSMUST00000020877 B4galnt3Q6L8S8 986 aa17.25■□□□□ 0.35
Twistnb-201ENSMUST00000020877 Card11Q8CIS0 1159 aa17.24■□□□□ 0.35
Twistnb-201ENSMUST00000020877 Upf2A2AT37 1269 aaKnown RBP17.23■□□□□ 0.35
Twistnb-201ENSMUST00000020877 Pkd2O35245 966 aa17.23■□□□□ 0.35
Twistnb-201ENSMUST00000020877 Aebp1Q640N1 1128 aa17.23■□□□□ 0.35
Twistnb-201ENSMUST00000020877 Ccdc18Q640L5 1455 aa17.22■□□□□ 0.35
Twistnb-201ENSMUST00000020877 Mphosph9A6H5Y1 991 aa17.19■□□□□ 0.34
Twistnb-201ENSMUST00000020877 Smg6P61406 1418 aaKnown RBP17.18■□□□□ 0.34
Twistnb-201ENSMUST00000020877 Trim30dE9PWL0 497 aa17.18■□□□□ 0.34
Twistnb-201ENSMUST00000020877 Tcerg1Q8CGF7 1100 aaKnown RBP17.17■□□□□ 0.34
Twistnb-201ENSMUST00000020877 Cabp1Q9JLK7 227 aa17.17■□□□□ 0.34
Twistnb-201ENSMUST00000020877 Pak3Q61036 559 aa17.14■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Ncapd3Q6ZQK0 1506 aa17.14■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Rundc1Q0VDN7 615 aa17.14■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Trim26Q99PN3 545 aa17.13■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Cwc22Q8C5N3 908 aaKnown RBP17.13■□□□□ 0.33
Twistnb-201ENSMUST00000020877 ChgaP26339 463 aaKnown RBP17.12■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Neurod2Q62414 383 aa17.12■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Ccdc9Q8VC31 543 aaKnown RBP17.11■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Arhgap35Q91YM2 1499 aa17.1■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Gm13695A2AK44 830 aa17.1■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Irx3P81067 507 aa17.09■□□□□ 0.33
Twistnb-201ENSMUST00000020877 Kdm2aP59997 1161 aa17.07■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Fyco1Q8VDC1 1437 aa17.07■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Hsp90ab1P11499 724 aaKnown RBP17.07■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Ipo9Q91YE6 1041 aa17.07■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Ercc6F8VPZ5 1481 aa17.06■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Pds5bQ4VA53 1446 aaKnown RBP17.06■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Spryd3E9Q9B3 442 aa17.05■□□□□ 0.32
Twistnb-201ENSMUST00000020877 CntlnA2AM05 1397 aa17.05■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Cc2d2aQ8CFW7 1633 aa17.05■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Trak1Q6PD31 939 aa17.04■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Arid4bA2CG63 1314 aaKnown RBP17.03■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Rpap1Q80TE0 1409 aa17.02■□□□□ 0.32
Twistnb-201ENSMUST00000020877 Arhgap27A2AB59 869 aa17.02■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Armcx1Q9CX83 456 aa17.02■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Vsig10D3YX43 558 aa17.01■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Arap1Q4LDD4 1452 aa17■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Slc4a2P13808 1237 aaKnown RBP17■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Mtus2Q3UHD3 1353 aa17■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Atp1b4Q99ME6 356 aa17■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Kif27Q7M6Z4 1394 aa16.99■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Cttnbp2B9EJA2 1648 aa16.98■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Top2aQ01320 1528 aaKnown RBP16.97■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Chmp5Q9D7S9 219 aa16.97■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Kcnh8P59111 1102 aa16.97■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Hdac5Q9Z2V6 1113 aa16.96■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Zscan21Q07231 555 aa16.96■□□□□ 0.31
Twistnb-201ENSMUST00000020877 Ccnb3Q810T2 1396 aa16.95■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Rrp7aQ9D1C9 280 aaKnown RBP16.94■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Mroh3A0A1D5RM54 893 aa16.93■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Usp47Q8BY87 1376 aa16.93■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Clstn2Q9ER65 966 aa16.93■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Naip1Q9QWK5 1403 aa16.92■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Mak16Q8BGS0 296 aaKnown RBP16.92■□□□□ 0.3
Twistnb-201ENSMUST00000020877 PtprkP35822 1457 aa16.91■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Zfp644E9QA22 1323 aa16.91■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Ppm1gQ61074 542 aa16.91■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Smarca4Q3TKT4 1613 aaKnown RBP16.91■□□□□ 0.3
Twistnb-201ENSMUST00000020877 DekQ7TNV0 380 aaKnown RBP16.9■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Gtf3c3Q3TMP1 882 aa16.9■□□□□ 0.3
Twistnb-201ENSMUST00000020877 Map4P27546 1125 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 82.9 ms