RNA–Protein interactions for RNA: ENSMUST00000020877.8

Twistnb-201, Transcript of DNA-directed RNA polymerase I subunit RPA43, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Twistnb, Length 4,325 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Twistnb-201ENSMUST00000020877 Rhox8Q6VSS7 320 aa23.03■■□□□ 1.28
Twistnb-201ENSMUST00000020877 Ehmt2Q9Z148 1263 aaKnown RBP21.67■■□□□ 1.06
Twistnb-201ENSMUST00000020877 Rpgrip1Q9EPQ2 1331 aa21.45■■□□□ 1.02
Twistnb-201ENSMUST00000020877 NischQ80TM9 1593 aa21.33■■□□□ 1.01
Twistnb-201ENSMUST00000020877 Ccdc136Q3TVA9 1136 aa20.95■□□□□ 0.94
Twistnb-201ENSMUST00000020877 Acin1Q9JIX8 1338 aaKnown RBP20.67■□□□□ 0.9
Twistnb-201ENSMUST00000020877 Zeb1Q64318 1117 aa20.46■□□□□ 0.87
Twistnb-201ENSMUST00000020877 Trim41Q5NCC3 630 aa20.42■□□□□ 0.86
Twistnb-201ENSMUST00000020877 Gab3Q8BSM5 595 aa20.35■□□□□ 0.85
Twistnb-201ENSMUST00000020877 Pcgf6Q99NA9 353 aa20.34■□□□□ 0.85
Twistnb-201ENSMUST00000020877 Cngb1E1AZ71 1325 aa20.2■□□□□ 0.82
Twistnb-201ENSMUST00000020877 Ccdc180J3QNE4 1664 aa20.2■□□□□ 0.82
Twistnb-201ENSMUST00000020877 Abcc9P70170 1546 aa20.16■□□□□ 0.82
Twistnb-201ENSMUST00000020877 Wdr66E9Q743 1299 aa20.13■□□□□ 0.81
Twistnb-201ENSMUST00000020877 Las1lA2BE28 776 aaKnown RBP20.07■□□□□ 0.8
Twistnb-201ENSMUST00000020877 HrcG5E8J6 738 aa20.04■□□□□ 0.8
Twistnb-201ENSMUST00000020877 Supt5hO55201 1082 aaKnown RBP19.97■□□□□ 0.79
Twistnb-201ENSMUST00000020877 Rtl1Q7M732 1744 aa19.88■□□□□ 0.77
Twistnb-201ENSMUST00000020877 Esf1Q3V1V3 845 aaKnown RBP19.86■□□□□ 0.77
Twistnb-201ENSMUST00000020877 UbtfP25976 765 aaKnown RBP19.69■□□□□ 0.74
Twistnb-201ENSMUST00000020877 Abcc8B2RUS7 1588 aa19.69■□□□□ 0.74
Twistnb-201ENSMUST00000020877 NefmP08553 848 aa19.67■□□□□ 0.74
Twistnb-201ENSMUST00000020877 Myt1lP97500 1187 aa19.66■□□□□ 0.74
Twistnb-201ENSMUST00000020877 Ppargc1bQ8VHJ7 1014 aa19.63■□□□□ 0.73
Twistnb-201ENSMUST00000020877 Neurod1Q60867 357 aa19.5■□□□□ 0.71
Twistnb-201ENSMUST00000020877 Npm2Q80W85 207 aa19.44■□□□□ 0.7
Twistnb-201ENSMUST00000020877 Mier1Q5UAK0 511 aa19.4■□□□□ 0.7
Twistnb-201ENSMUST00000020877 CenpbP27790 599 aa19.36■□□□□ 0.69
Twistnb-201ENSMUST00000020877 Cdk11bP24788 784 aaKnown RBP19.35■□□□□ 0.69
Twistnb-201ENSMUST00000020877 Zcchc6Q5BLK4 1491 aaKnown RBP19.31■□□□□ 0.68
Twistnb-201ENSMUST00000020877 Dcaf1Q80TR8 1506 aa19.27■□□□□ 0.68
Twistnb-201ENSMUST00000020877 Nop58Q6DFW4 536 aaKnown RBP19.27■□□□□ 0.67
Twistnb-201ENSMUST00000020877 Sall2Q9QX96 1004 aa19.24■□□□□ 0.67
Twistnb-201ENSMUST00000020877 Ube2uB1AUC4 352 aa19.15■□□□□ 0.66
Twistnb-201ENSMUST00000020877 Chic1Q8CBW7 227 aa19.11■□□□□ 0.65
Twistnb-201ENSMUST00000020877 Csrnp3P59055 597 aa19.09■□□□□ 0.65
Twistnb-201ENSMUST00000020877 Gm38655A0A286YDK6 273 aa19.08■□□□□ 0.64
Twistnb-201ENSMUST00000020877 Gm35339A0A140LHH9 1649 aa19.05■□□□□ 0.64
Twistnb-201ENSMUST00000020877 Slc24a1Q91WD8 1130 aa19.02■□□□□ 0.63
Twistnb-201ENSMUST00000020877 TonslQ6NZL6 1363 aa18.92■□□□□ 0.62
Twistnb-201ENSMUST00000020877 Ap3b1Q9Z1T1 1105 aa18.91■□□□□ 0.62
Twistnb-201ENSMUST00000020877 Anks4bQ8K3X6 423 aa18.89■□□□□ 0.62
Twistnb-201ENSMUST00000020877 Cep164Q5DU05 1446 aa18.89■□□□□ 0.61
Twistnb-201ENSMUST00000020877 Il27Q8K3I6 234 aa18.85■□□□□ 0.61
Twistnb-201ENSMUST00000020877 Myt1Q8CFC2 1127 aa18.83■□□□□ 0.61
Twistnb-201ENSMUST00000020877 ClspnQ80YR7 1315 aa18.82■□□□□ 0.6
Twistnb-201ENSMUST00000020877 1700123L14RikQ3V2K7 440 aa18.81■□□□□ 0.6
Twistnb-201ENSMUST00000020877 Pelp1Q9DBD5 1123 aaKnown RBP18.81■□□□□ 0.6
Twistnb-201ENSMUST00000020877 Plekhg3Q4VAC9 1341 aa18.81■□□□□ 0.6
Twistnb-201ENSMUST00000020877 DiexfQ8BTT6 772 aaKnown RBP18.81■□□□□ 0.6
Twistnb-201ENSMUST00000020877 Mapk8ip2Q9ERE9 830 aa18.79■□□□□ 0.6
Twistnb-201ENSMUST00000020877 Amer1Q7TS75 1132 aa18.78■□□□□ 0.6
Twistnb-201ENSMUST00000020877 Aebp2Q9Z248 504 aaKnown RBP18.76■□□□□ 0.59
Twistnb-201ENSMUST00000020877 Fam50aQ9WV03 339 aaKnown RBP18.74■□□□□ 0.59
Twistnb-201ENSMUST00000020877 Eid3Q3V124 375 aa18.73■□□□□ 0.59
Twistnb-201ENSMUST00000020877 Rb1cc1Q9ESK9 1588 aa18.72■□□□□ 0.59
Twistnb-201ENSMUST00000020877 NclP09405 707 aaKnown RBP18.71■□□□□ 0.59
Twistnb-201ENSMUST00000020877 Stra8P70278 393 aa18.67■□□□□ 0.58
Twistnb-201ENSMUST00000020877 Tnnt3Q9QZ47 272 aa18.63■□□□□ 0.57
Twistnb-201ENSMUST00000020877 Ttbk1Q6PCN3 1308 aa18.58■□□□□ 0.57
Twistnb-201ENSMUST00000020877 Eif5bQ05D44 1216 aaKnown RBP18.57■□□□□ 0.56
Twistnb-201ENSMUST00000020877 Aplp2Q06335 707 aa18.57■□□□□ 0.56
Twistnb-201ENSMUST00000020877 Rsf1E9PWW9 1441 aaKnown RBP18.46■□□□□ 0.55
Twistnb-201ENSMUST00000020877 Lmod2Q3UHZ5 550 aa18.44■□□□□ 0.54
Twistnb-201ENSMUST00000020877 Brd4Q9ESU6 1400 aaKnown RBP18.4■□□□□ 0.54
Twistnb-201ENSMUST00000020877 Clip1Q922J3 1391 aa18.38■□□□□ 0.53
Twistnb-201ENSMUST00000020877 Baz1aO88379 1555 aa18.33■□□□□ 0.52
Twistnb-201ENSMUST00000020877 NrdcQ8BHG1 1161 aa18.3■□□□□ 0.52
Twistnb-201ENSMUST00000020877 Anp32aO35381 247 aa18.27■□□□□ 0.52
Twistnb-201ENSMUST00000020877 Fam71e1A1L3C1 212 aa18.25■□□□□ 0.51
Twistnb-201ENSMUST00000020877 SafbD3YXK2 937 aaKnown RBP18.25■□□□□ 0.51
Twistnb-201ENSMUST00000020877 Ccdc88bQ4QRL3 1481 aa18.22■□□□□ 0.51
Twistnb-201ENSMUST00000020877 Hnrnpul2Q00PI9 745 aaKnown RBP18.18■□□□□ 0.5
Twistnb-201ENSMUST00000020877 Golga3P55937 1487 aa18.16■□□□□ 0.5
Twistnb-201ENSMUST00000020877 Calr4Q3TQS0 420 aa18.09■□□□□ 0.49
Twistnb-201ENSMUST00000020877 NacadQ5SWP3 1504 aa18.08■□□□□ 0.48
Twistnb-201ENSMUST00000020877 Kdm5dQ62240 1548 aa18.07■□□□□ 0.48
Twistnb-201ENSMUST00000020877 Ppp4r2Q0VGB7 417 aa18.04■□□□□ 0.48
Twistnb-201ENSMUST00000020877 4933416C03RikQ3V063 378 aa18.04■□□□□ 0.48
Twistnb-201ENSMUST00000020877 Rtl5Q5DTT4 599 aa17.99■□□□□ 0.47
Twistnb-201ENSMUST00000020877 Zbtb4Q5F293 982 aa17.94■□□□□ 0.46
Twistnb-201ENSMUST00000020877 BlmO88700 1416 aa17.92■□□□□ 0.46
Twistnb-201ENSMUST00000020877 Chic2Q9D9G3 165 aa17.92■□□□□ 0.46
Twistnb-201ENSMUST00000020877 NeflP08551 543 aa17.91■□□□□ 0.46
Twistnb-201ENSMUST00000020877 P3h3Q8CG70 732 aa17.9■□□□□ 0.46
Twistnb-201ENSMUST00000020877 Zbtb7cQ8VCZ7 619 aa17.9■□□□□ 0.46
Twistnb-201ENSMUST00000020877 Mrs2Q5NCE8 434 aa17.89■□□□□ 0.45
Twistnb-201ENSMUST00000020877 Setd5Q5XJV7 1441 aa17.88■□□□□ 0.45
Twistnb-201ENSMUST00000020877 Npm1Q61937 292 aaKnown RBP17.86■□□□□ 0.45
Twistnb-201ENSMUST00000020877 Wdr43Q6ZQL4 677 aaKnown RBP17.85■□□□□ 0.45
Twistnb-201ENSMUST00000020877 Bcl11aQ9QYE3 773 aa17.85■□□□□ 0.45
Twistnb-201ENSMUST00000020877 Anp32bQ9EST5 272 aaKnown RBP17.82■□□□□ 0.44
Twistnb-201ENSMUST00000020877 DaxxO35613 739 aa17.79■□□□□ 0.44
Twistnb-201ENSMUST00000020877 Hspa5P20029 655 aaKnown RBP17.75■□□□□ 0.43
Twistnb-201ENSMUST00000020877 Cep162Q6ZQ06 1403 aa17.75■□□□□ 0.43
Twistnb-201ENSMUST00000020877 Cecr2E9Q2Z1 1453 aa17.74■□□□□ 0.43
Twistnb-201ENSMUST00000020877 ScribQ80U72 1612 aa17.73■□□□□ 0.43
Twistnb-201ENSMUST00000020877 Ccer2J3QPU5 274 aa17.72■□□□□ 0.43
Twistnb-201ENSMUST00000020877 Sin3aQ60520 1274 aaKnown RBP17.69■□□□□ 0.42
Twistnb-201ENSMUST00000020877 Eea1Q8BL66 1411 aa17.69■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms