RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 AU015836B2RUM3 263 aa16.21■□□□□ 0.19
Pcdhac1-201ENSMUST00000007584 Htatsf1Q8BGC0 757 aa16.2■□□□□ 0.18
Pcdhac1-201ENSMUST00000007584 Arid4bA2CG63 1314 aaKnown RBP16.2■□□□□ 0.18
Pcdhac1-201ENSMUST00000007584 Plcb2A3KGF7 1181 aa16.2■□□□□ 0.18
Pcdhac1-201ENSMUST00000007584 Spryd3E9Q9B3 442 aa16.18■□□□□ 0.18
Pcdhac1-201ENSMUST00000007584 Znf316Q6PGE4 1016 aa16.16■□□□□ 0.18
Pcdhac1-201ENSMUST00000007584 Zcchc6Q5BLK4 1491 aaKnown RBP16.1■□□□□ 0.17
Pcdhac1-201ENSMUST00000007584 PrkcshO08795 521 aa16.1■□□□□ 0.17
Pcdhac1-201ENSMUST00000007584 Pknox2Q8BG99 474 aa16.09■□□□□ 0.17
Pcdhac1-201ENSMUST00000007584 Ppm1gQ61074 542 aa16.08■□□□□ 0.16
Pcdhac1-201ENSMUST00000007584 Erich6D3Z6S9 713 aa16.07■□□□□ 0.16
Pcdhac1-201ENSMUST00000007584 Dnttip2Q8R2M2 758 aaKnown RBP16.07■□□□□ 0.16
Pcdhac1-201ENSMUST00000007584 Ofd1Q80Z25 1017 aa16.04■□□□□ 0.16
Pcdhac1-201ENSMUST00000007584 Gtf3c3Q3TMP1 882 aa16.04■□□□□ 0.16
Pcdhac1-201ENSMUST00000007584 Ccer2J3QPU5 274 aa16■□□□□ 0.15
Pcdhac1-201ENSMUST00000007584 Slc4a3P16283 1227 aa15.99■□□□□ 0.15
Pcdhac1-201ENSMUST00000007584 Clip1Q922J3 1391 aa15.98■□□□□ 0.15
Pcdhac1-201ENSMUST00000007584 Trim26Q99PN3 545 aa15.98■□□□□ 0.15
Pcdhac1-201ENSMUST00000007584 Dbr1Q923B1 550 aa15.97■□□□□ 0.15
Pcdhac1-201ENSMUST00000007584 Atp1b4Q99ME6 356 aa15.97■□□□□ 0.15
Pcdhac1-201ENSMUST00000007584 Erich6bQ9D4S6 220 aa15.95■□□□□ 0.14
Pcdhac1-201ENSMUST00000007584 Adam1bQ8R534 806 aa15.93■□□□□ 0.14
Pcdhac1-201ENSMUST00000007584 Hdac5Q9Z2V6 1113 aa15.92■□□□□ 0.14
Pcdhac1-201ENSMUST00000007584 B4galnt3Q6L8S8 986 aa15.92■□□□□ 0.14
Pcdhac1-201ENSMUST00000007584 Supt16hQ920B9 1047 aa15.92■□□□□ 0.14
Pcdhac1-201ENSMUST00000007584 Apbb1Q9QXJ1 710 aa15.92■□□□□ 0.14
Pcdhac1-201ENSMUST00000007584 MsnP26041 577 aaKnown RBP15.91■□□□□ 0.14
Pcdhac1-201ENSMUST00000007584 Fgd1P52734 960 aa15.9■□□□□ 0.14
Pcdhac1-201ENSMUST00000007584 Casc1Q6TDU8 730 aa15.86■□□□□ 0.13
Pcdhac1-201ENSMUST00000007584 Rrp12Q6P5B0 1295 aaKnown RBP15.85■□□□□ 0.13
Pcdhac1-201ENSMUST00000007584 Tcerg1Q8CGF7 1100 aaKnown RBP15.84■□□□□ 0.13
Pcdhac1-201ENSMUST00000007584 Gm13697A2AK42 830 aa15.84■□□□□ 0.13
Pcdhac1-201ENSMUST00000007584 Ipo9Q91YE6 1041 aa15.83■□□□□ 0.12
Pcdhac1-201ENSMUST00000007584 Podxl2Q8CAE9 603 aa15.82■□□□□ 0.12
Pcdhac1-201ENSMUST00000007584 Rtn4Q99P72 1162 aaKnown RBP15.82■□□□□ 0.12
Pcdhac1-201ENSMUST00000007584 Cep164Q5DU05 1446 aa15.82■□□□□ 0.12
Pcdhac1-201ENSMUST00000007584 Chic2Q9D9G3 165 aa15.81■□□□□ 0.12
Pcdhac1-201ENSMUST00000007584 Abcc9P70170 1546 aa15.8■□□□□ 0.12
Pcdhac1-201ENSMUST00000007584 Dnai1Q8C0M8 701 aa15.8■□□□□ 0.12
Pcdhac1-201ENSMUST00000007584 Znf326O88291 580 aa15.77■□□□□ 0.12
Pcdhac1-201ENSMUST00000007584 Armcx1Q9CX83 456 aa15.77■□□□□ 0.12
Pcdhac1-201ENSMUST00000007584 IbspQ61711 324 aa15.77■□□□□ 0.11
Pcdhac1-201ENSMUST00000007584 Neurod2Q62414 383 aa15.72■□□□□ 0.11
Pcdhac1-201ENSMUST00000007584 Mak16Q8BGS0 296 aaKnown RBP15.71■□□□□ 0.11
Pcdhac1-201ENSMUST00000007584 Calcoco2A2A6M5 331 aa15.71■□□□□ 0.11
Pcdhac1-201ENSMUST00000007584 Plcd4Q8K3R3 807 aa15.7■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Nolc1E9Q5C9 702 aaKnown RBP15.69■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Kiaa0754Q69ZZ9 979 aa15.69■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Fbxo2Q80UW2 297 aa15.69■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Map7O88735 730 aa15.69■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Chmp5Q9D7S9 219 aa15.68■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Ifnlr1Q8CGK5 535 aa15.68■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Ddrgk1Q80WW9 315 aa15.67■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Npm1Q61937 292 aaKnown RBP15.67■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Map7d2A2AG50 781 aa15.65■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Gm13695A2AK44 830 aa15.65■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 SlkO54988 1233 aa15.65■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 VgfQ0VGU4 617 aa15.65■□□□□ 0.1
Pcdhac1-201ENSMUST00000007584 Rgl3Q3UYI5 709 aa15.64■□□□□ 0.09
Pcdhac1-201ENSMUST00000007584 ChgaP26339 463 aaKnown RBP15.64■□□□□ 0.09
Pcdhac1-201ENSMUST00000007584 PnnO35691 725 aaKnown RBP15.63■□□□□ 0.09
Pcdhac1-201ENSMUST00000007584 Pcmtd1P59913 357 aa15.61■□□□□ 0.09
Pcdhac1-201ENSMUST00000007584 Wwc2Q6NXJ0 1187 aa15.61■□□□□ 0.09
Pcdhac1-201ENSMUST00000007584 Gpatch11Q3UFS4 262 aa15.61■□□□□ 0.09
Pcdhac1-201ENSMUST00000007584 EspnQ9ET47 871 aa15.58■□□□□ 0.09
Pcdhac1-201ENSMUST00000007584 BlmO88700 1416 aa15.58■□□□□ 0.09
Pcdhac1-201ENSMUST00000007584 Fkbp15Q6P9Q6 1216 aaKnown RBP15.58■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 Mbd3Q9Z2D8 285 aaKnown RBP15.58■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 Becn1O88597 448 aa15.57■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 Gm973E9Q295 1059 aa15.57■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 Rwdd1Q9CQK7 243 aa15.56■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 SetQ9EQU5 289 aaKnown RBP15.56■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 Trim30aP15533 496 aa15.55■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 KnstrnQ9D9Z1 312 aaKnown RBP15.55■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 Irx6Q9ER75 438 aa15.54■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 RdxP26043 583 aaKnown RBP15.53■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 Ipo8Q7TMY7 1010 aa15.53■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 Hsp90b1P08113 802 aaKnown RBP15.53■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 4933402E13RikQ9D4D2 429 aa15.53■□□□□ 0.08
Pcdhac1-201ENSMUST00000007584 Gm6268A2A3U9 297 aa15.52■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 Ush1cQ9ES64 910 aa15.51■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 Grwd1Q810D6 446 aaKnown RBP15.51■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 PtmsQ9D0J8 101 aaKnown RBP15.5■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 Pdcl3Q8BVF2 240 aa15.5■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 Gm35339A0A140LHH9 1649 aa15.5■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 Pes1Q9EQ61 584 aaKnown RBP15.5■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 Card11Q8CIS0 1159 aa15.48■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 Cwc22Q8C5N3 908 aaKnown RBP15.47■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 Abcc8B2RUS7 1588 aa15.47■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 Chmp4bQ9D8B3 224 aaKnown RBP15.46■□□□□ 0.07
Pcdhac1-201ENSMUST00000007584 MccE9PWI3 1003 aa15.45■□□□□ 0.06
Pcdhac1-201ENSMUST00000007584 Mfap1aC0HKD8 439 aaKnown RBP15.45■□□□□ 0.06
Pcdhac1-201ENSMUST00000007584 Mfap1bC0HKD9 439 aaKnown RBP15.45■□□□□ 0.06
Pcdhac1-201ENSMUST00000007584 Clstn2Q9ER65 966 aa15.43■□□□□ 0.06
Pcdhac1-201ENSMUST00000007584 Mapk8ip3Q9ESN9 1337 aa15.43■□□□□ 0.06
Pcdhac1-201ENSMUST00000007584 CgnP59242 1191 aa15.42■□□□□ 0.06
Pcdhac1-201ENSMUST00000007584 Exoc6Q8R313 802 aa15.41■□□□□ 0.06
Pcdhac1-201ENSMUST00000007584 Cald1E9QA15 768 aaKnown RBP15.38■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Kdm2aP59997 1161 aa15.38■□□□□ 0.05
Pcdhac1-201ENSMUST00000007584 Samd1D3YXK1 519 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 180 ms