RNA–Protein interactions for RNA: YPL135W

ISU1, Transcript of Conserved protein of the mitochondrial matrix, yeast

Gene ISU1, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISU1	YPL135W	ECM16	Q04217	1267 aa	Known RBP	3.12	□□□□□ -1.91
ISU1	YPL135W	BRE1	Q07457	700 aa	Known RBP	3.12	□□□□□ -1.91
ISU1	YPL135W	YOL114C	Q12322	202 aa		3.12	□□□□□ -1.91
ISU1	YPL135W	NKP1	Q12493	238 aa		3.12	□□□□□ -1.91
ISU1	YPL135W	RKR1	Q04781	1562 aa		3.12	□□□□□ -1.91
ISU1	YPL135W	APA1	P16550	321 aa	Known RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
ISU1	YPL135W	KIN82	P25341	720 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	FEN2	P25621	512 aa	Known RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	BCS1	P32839	456 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	RMA1	P36001	430 aa	Known RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	PPS1	P38148	807 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	COS111	P38308	924 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	CCT3	P39077	534 aa	Known RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	STL1	P39932	569 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	SCS2	P40075	244 aa	Known RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	PRM2	P40534	656 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	ENP2	P48234	707 aa	Known RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	ASK10	P48361	1146 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	RFX1	P48743	811 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	UBC11	P52492	156 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	PAN2	P53010	1115 aa	Predicted RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	TAN1	P53072	289 aa	Predicted RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	CNM67	P53865	581 aa	Known RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	SQS1	P53866	767 aa	Known RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	RNT1	Q02555	471 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	TIM50	Q02776	476 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	YMR206W	Q03695	313 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	PPN1	Q04119	674 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	MLC2	Q06580	163 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	HIM1	Q06674	414 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	ESC8	Q08119	714 aa		3.11	□□□□□ -1.91
ISU1	YPL135W	RTK1	Q12100	620 aa	Predicted RBP	3.11	□□□□□ -1.91
ISU1	YPL135W	TUP1	P16649	713 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	RPA135	P22138	1203 aa	Known RBP	3.1	□□□□□ -1.91
ISU1	YPL135W	TRX2	P22803	104 aa	Known RBP	3.1	□□□□□ -1.91
ISU1	YPL135W	PRP22	P24384	1145 aa	Known RBP	3.1	□□□□□ -1.91
ISU1	YPL135W	MTC7	P32633	139 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	DEF1	P35732	738 aa	Known RBP	3.1	□□□□□ -1.91
ISU1	YPL135W	CDS1	P38221	457 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	EHT1	P38295	451 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	YHL041W	P38730	149 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	RIM4	P38741	713 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	CRG1	P38892	291 aa	RIP-Chip data	3.1	□□□□□ -1.91	not detected
ISU1	YPL135W	REV7	P38927	245 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	SAW1	P39735	261 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	FTR1	P40088	404 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	UBX4	P54730	416 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	MOT3	P54785	490 aa	Known RBP	3.1	□□□□□ -1.91
ISU1	YPL135W	KIN4	Q01919	800 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	NSE5	Q03718	556 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	ADY4	Q05955	493 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	YFT2	Q06676	274 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	MCH5	Q08777	521 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	ZRT2	Q12436	422 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	SMC4	Q12267	1418 aa		3.1	□□□□□ -1.91
ISU1	YPL135W	RPO31	P04051	1460 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	ADH4	P10127	382 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	HMG2	P12684	1045 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	PGI1	P12709	554 aa	Known RBP	3.09	□□□□□ -1.91
ISU1	YPL135W	SEC18	P18759	758 aa	Known RBP	3.09	□□□□□ -1.91
ISU1	YPL135W	HOP1	P20050	605 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	CBP3	P21560	335 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	DPB3	P27344	201 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	TGL1	P34163	548 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	PHO11	P35842	467 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	PHO12	P38693	467 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	RRP8	P38961	392 aa	Known RBP	3.09	□□□□□ -1.91
ISU1	YPL135W	ERP2	P39704	215 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	GIP4	P39732	760 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	TMN3	P40071	706 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	PIG2	P40187	538 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	MAD2	P40958	196 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	QRI7	P43122	407 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	MNT2	P53059	558 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	MDR1	P53258	950 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	SPO1	P53541	631 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	YCG1	Q06680	1035 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	YOL073C	Q08232	322 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	MLH3	Q12083	715 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	CHS5	Q12114	671 aa	Known RBP	3.09	□□□□□ -1.91
ISU1	YPL135W	PSF3	Q12146	194 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	RRP6	Q12149	733 aa	Known RBP	3.09	□□□□□ -1.91
ISU1	YPL135W	YKL033W-A	Q86ZR7	236 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	TY1B-DR3	Q99231	1755 aa		3.09	□□□□□ -1.91
ISU1	YPL135W	PEP1	P32319	1579 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	TY2B-LR1	P0C2J3	1770 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	TY2B-F	P0CX63	1770 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	TY2B-GR2	P0CX64	1770 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	TY2B-C	P25384	1770 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	TY2B-DR2	Q03494	1770 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	TY1B-DR1	Q03855	1755 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	TY2B-DR3	Q07791	1770 aa	Known RBP	3.08	□□□□□ -1.92
ISU1	YPL135W	TY2B-OR1	Q12113	1770 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	TY2B-DR1	Q12472	1770 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	TY2B-OR2	Q12501	1770 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	URA3	P03962	267 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	PPR1	P07272	904 aa	Predicted RBP	3.08	□□□□□ -1.92
ISU1	YPL135W	MSS18	P08593	268 aa		3.08	□□□□□ -1.92
ISU1	YPL135W	ARG1	P22768	420 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 173 ms