Protein–RNA interactions for Protein: P40088

FTR1, Plasma membrane iron permease, yeastyeast

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FTR1P40088 YML009W-BYML009W-B 477 nt22.1■■□□□ 1.13
FTR1P40088 NSR1YGR159C 1245 nt21.89■■□□□ 1.09
FTR1P40088 NOP1YDL014W 984 nt21.52■■□□□ 1.04
FTR1P40088 YKL036CYKL036C 393 nt19.89■□□□□ 0.77
FTR1P40088 MDJ1YFL016C 1536 nt19.38■□□□□ 0.69
FTR1P40088 Q0297Q0297 156 nt18.82■□□□□ 0.6
FTR1P40088 SRX1YKL086W 384 nt18.77■□□□□ 0.6
FTR1P40088 YJL027CYJL027C 417 nt18.58■□□□□ 0.56
FTR1P40088 SCS3YGL126W 1143 nt18.1■□□□□ 0.49
FTR1P40088 YCR051WYCR051W 669 nt17.85■□□□□ 0.45
FTR1P40088 YOL085CYOL085C 342 nt17.21■□□□□ 0.35
FTR1P40088 DBP2YNL112W 1641 nt17.13■□□□□ 0.33
FTR1P40088 PKP1YIL042C 1185 nt16.95■□□□□ 0.3
FTR1P40088 TRN1tP(UGG)A 72 nt16.92■□□□□ 0.3
FTR1P40088 SUF9tP(UGG)F 72 nt16.92■□□□□ 0.3
FTR1P40088 SUF8tP(UGG)H 72 nt16.92■□□□□ 0.3
FTR1P40088 tP(UGG)LtP(UGG)L 72 nt16.92■□□□□ 0.3
FTR1P40088 SUF7tP(UGG)M 72 nt16.92■□□□□ 0.3
FTR1P40088 tP(UGG)N1tP(UGG)N1 72 nt16.92■□□□□ 0.3
FTR1P40088 tP(UGG)N2tP(UGG)N2 72 nt16.92■□□□□ 0.3
FTR1P40088 tP(UGG)O1tP(UGG)O1 72 nt16.92■□□□□ 0.3
FTR1P40088 SUF11tP(UGG)O2 72 nt16.92■□□□□ 0.3
FTR1P40088 RPP1BYDL130W 321 nt16.9■□□□□ 0.3
FTR1P40088 CCC1YLR220W 969 nt16.79■□□□□ 0.28
FTR1P40088 YBR190WYBR190W 312 nt16.52■□□□□ 0.24
FTR1P40088 ATS1YAL020C 1002 nt16.21■□□□□ 0.19
FTR1P40088 RVS167YDR388W 1449 nt16.2■□□□□ 0.18
FTR1P40088 RTC3YHR087W 336 nt16.19■□□□□ 0.18
FTR1P40088 PET122YER153C 765 nt16.13■□□□□ 0.17
FTR1P40088 SCJ1YMR214W 1134 nt16.11■□□□□ 0.17
FTR1P40088 tP(UGG)O3tP(UGG)O3 72 nt16.05■□□□□ 0.16
FTR1P40088 SCR1SCR1 522 nt16.01■□□□□ 0.15
FTR1P40088 RRN5YLR141W 1092 nt15.67■□□□□ 0.1
FTR1P40088 SHR5YOL110W 714 nt15.62■□□□□ 0.09
FTR1P40088 YDJ1YNL064C 1230 nt15.52■□□□□ 0.08
FTR1P40088 RSB1YOR049C 1065 nt15.39■□□□□ 0.05
FTR1P40088 YER088W-BYER088W-B 147 nt15.36■□□□□ 0.05
FTR1P40088 GAR1YHR089C 618 nt15.18■□□□□ 0.02
FTR1P40088 DEP1YAL013W 1218 nt15.17■□□□□ 0.02
FTR1P40088 URN1YPR152C 1398 nt15.15■□□□□ 0.02
FTR1P40088 PST2YDR032C 597 nt14.99□□□□□ -0.01
FTR1P40088 RPN10YHR200W 807 nt14.98□□□□□ -0.01
FTR1P40088 YNL208WYNL208W 600 nt14.94□□□□□ -0.02
FTR1P40088 PUT4YOR348C 1884 nt14.91□□□□□ -0.02
FTR1P40088 OPI9YLR338W 858 nt14.91□□□□□ -0.02
FTR1P40088 SAH1YER043C 1350 nt14.8□□□□□ -0.04
FTR1P40088 ARE1YCR048W 1833 nt14.66□□□□□ -0.06
FTR1P40088 TIR1YER011W 765 nt14.66□□□□□ -0.06
FTR1P40088 SSA3YBL075C 1950 nt14.53□□□□□ -0.08
FTR1P40088 YHR049C-AYHR049C-A 297 nt14.51□□□□□ -0.09
FTR1P40088 PUN1YLR414C 792 nt14.5□□□□□ -0.09
FTR1P40088 POA1YBR022W 534 nt14.49□□□□□ -0.09
FTR1P40088 YJR018WYJR018W 363 nt14.46□□□□□ -0.09
FTR1P40088 YKL097CYKL097C 411 nt14.46□□□□□ -0.09
FTR1P40088 SSA1YAL005C 1929 nt14.45□□□□□ -0.1
FTR1P40088 SHU1YHL006C 453 nt14.37□□□□□ -0.11
FTR1P40088 PTC2YER089C 1395 nt14.29□□□□□ -0.12
FTR1P40088 RPP2BYDR382W 333 nt14.22□□□□□ -0.13
FTR1P40088 BUD23YCR047C 828 nt14.21□□□□□ -0.13
FTR1P40088 YJR120WYJR120W 351 nt14.19□□□□□ -0.14
FTR1P40088 SRB2YHR041C 633 nt14.18□□□□□ -0.14
FTR1P40088 BSC6YOL137W 1494 nt14.15□□□□□ -0.14
FTR1P40088 YAL037C-BYAL037C-B 975 nt14.14□□□□□ -0.15
FTR1P40088 NAB2YGL122C 1578 nt14.11□□□□□ -0.15
FTR1P40088 WWM1YFL010C 636 nt14.02□□□□□ -0.17
FTR1P40088 YGR021WYGR021W 873 nt13.98□□□□□ -0.17
FTR1P40088 INM2YDR287W 879 nt13.94□□□□□ -0.18
FTR1P40088 DAL1YIR027C 1383 nt13.94□□□□□ -0.18
FTR1P40088 FPR4YLR449W 1179 nt13.93□□□□□ -0.18
FTR1P40088 BDH2YAL061W 1254 nt13.91□□□□□ -0.18
FTR1P40088 HOM6YJR139C 1080 nt13.9□□□□□ -0.18
FTR1P40088 FIS1YIL065C 468 nt13.89□□□□□ -0.19
FTR1P40088 MNP1YGL068W 585 nt13.85□□□□□ -0.19
FTR1P40088 YOR139CYOR139C 393 nt13.83□□□□□ -0.2
FTR1P40088 YBL100CYBL100C 315 nt13.82□□□□□ -0.2
FTR1P40088 YFL021C-AYFL021C-A 855 nt13.8□□□□□ -0.2
FTR1P40088 PHO4YFR034C 939 nt13.8□□□□□ -0.2
FTR1P40088 NPL3YDR432W 1245 nt13.76□□□□□ -0.21
FTR1P40088 LSM3YLR438C-A 270 nt13.75□□□□□ -0.21
FTR1P40088 RKM5YLR137W 1104 nt13.71□□□□□ -0.21
FTR1P40088 TRM9YML014W 840 nt13.66□□□□□ -0.22
FTR1P40088 YOL037CYOL037C 354 nt13.66□□□□□ -0.22
FTR1P40088 FUN26YAL022C 1554 nt13.65□□□□□ -0.22
FTR1P40088 SPT5YML010W 3192 nt13.49□□□□□ -0.25
FTR1P40088 YPS1YLR120C 1710 nt13.49□□□□□ -0.25
FTR1P40088 CCT6YDR188W 1641 nt13.49□□□□□ -0.25
FTR1P40088 ALF1YNL148C 765 nt13.47□□□□□ -0.25
FTR1P40088 YDR095CYDR095C 411 nt13.42□□□□□ -0.26
FTR1P40088 SUF2tP(AGG)C 72 nt13.4□□□□□ -0.26
FTR1P40088 SUF10tP(AGG)N 72 nt13.4□□□□□ -0.26
FTR1P40088 YHR165W-AYHR165W-A 312 nt13.37□□□□□ -0.27
FTR1P40088 YLR281CYLR281C 468 nt13.32□□□□□ -0.28
FTR1P40088 tM(CAU)CtM(CAU)C 72 nt13.3□□□□□ -0.28
FTR1P40088 IMT4tM(CAU)E 72 nt13.3□□□□□ -0.28
FTR1P40088 IMT3tM(CAU)J3 72 nt13.3□□□□□ -0.28
FTR1P40088 IMT1tM(CAU)O1 72 nt13.3□□□□□ -0.28
FTR1P40088 IMT2tM(CAU)P 72 nt13.3□□□□□ -0.28
FTR1P40088 WHI5YOR083W 888 nt13.28□□□□□ -0.28
FTR1P40088 MEP2YNL142W 1500 nt13.27□□□□□ -0.29
FTR1P40088 PUS2YGL063W 1113 nt13.23□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms