Protein–RNA interactions for Protein: P52492

UBC11, Ubiquitin-conjugating enzyme E2-18 kDa, yeastyeast

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBC11P52492 NSR1YGR159C 1245 nt13.91□□□□□ -0.18
UBC11P52492 YML009W-BYML009W-B 477 nt13.62□□□□□ -0.23
UBC11P52492 NOP1YDL014W 984 nt13.08□□□□□ -0.32
UBC11P52492 MDJ1YFL016C 1536 nt12.75□□□□□ -0.37
UBC11P52492 YJL027CYJL027C 417 nt11.76□□□□□ -0.53
UBC11P52492 Q0182Q0182 405 nt11.69□□□□□ -0.54
UBC11P52492 YKL036CYKL036C 393 nt11.63□□□□□ -0.55
UBC11P52492 SSA3YBL075C 1950 nt11.54□□□□□ -0.56
UBC11P52492 MOT3YMR070W 1473 nt11.41□□□□□ -0.58
UBC11P52492 SRX1YKL086W 384 nt11.38□□□□□ -0.59
UBC11P52492 Q0297Q0297 156 nt11.26□□□□□ -0.61
UBC11P52492 DBP2YNL112W 1641 nt11.07□□□□□ -0.64
UBC11P52492 YBR190WYBR190W 312 nt11.01□□□□□ -0.65
UBC11P52492 YCR051WYCR051W 669 nt10.79□□□□□ -0.68
UBC11P52492 RTC3YHR087W 336 nt10.76□□□□□ -0.69
UBC11P52492 TRN1tP(UGG)A 72 nt10.55□□□□□ -0.72
UBC11P52492 SUF9tP(UGG)F 72 nt10.55□□□□□ -0.72
UBC11P52492 SUF8tP(UGG)H 72 nt10.55□□□□□ -0.72
UBC11P52492 tP(UGG)LtP(UGG)L 72 nt10.55□□□□□ -0.72
UBC11P52492 SUF7tP(UGG)M 72 nt10.55□□□□□ -0.72
UBC11P52492 tP(UGG)N1tP(UGG)N1 72 nt10.55□□□□□ -0.72
UBC11P52492 tP(UGG)N2tP(UGG)N2 72 nt10.55□□□□□ -0.72
UBC11P52492 tP(UGG)O1tP(UGG)O1 72 nt10.55□□□□□ -0.72
UBC11P52492 SUF11tP(UGG)O2 72 nt10.55□□□□□ -0.72
UBC11P52492 CCC1YLR220W 969 nt10.46□□□□□ -0.73
UBC11P52492 RVS167YDR388W 1449 nt10.39□□□□□ -0.75
UBC11P52492 SCS3YGL126W 1143 nt10.33□□□□□ -0.76
UBC11P52492 PUT4YOR348C 1884 nt10.3□□□□□ -0.76
UBC11P52492 SSA1YAL005C 1929 nt10.19□□□□□ -0.78
UBC11P52492 SCJ1YMR214W 1134 nt10.18□□□□□ -0.78
UBC11P52492 RPP1BYDL130W 321 nt10.11□□□□□ -0.79
UBC11P52492 FPS1YLL043W 2010 nt10.06□□□□□ -0.8
UBC11P52492 YOL085CYOL085C 342 nt10.06□□□□□ -0.8
UBC11P52492 NVJ2YPR091C 2313 nt10.02□□□□□ -0.81
UBC11P52492 ARE1YCR048W 1833 nt9.98□□□□□ -0.81
UBC11P52492 PKP1YIL042C 1185 nt9.96□□□□□ -0.82
UBC11P52492 POA1YBR022W 534 nt9.96□□□□□ -0.82
UBC11P52492 PAC11YDR488C 1602 nt9.91□□□□□ -0.82
UBC11P52492 SHR5YOL110W 714 nt9.89□□□□□ -0.83
UBC11P52492 URN1YPR152C 1398 nt9.88□□□□□ -0.83
UBC11P52492 YHR049C-AYHR049C-A 297 nt9.88□□□□□ -0.83
UBC11P52492 SAH1YER043C 1350 nt9.87□□□□□ -0.83
UBC11P52492 tP(UGG)O3tP(UGG)O3 72 nt9.84□□□□□ -0.83
UBC11P52492 BSC6YOL137W 1494 nt9.84□□□□□ -0.83
UBC11P52492 OPI9YLR338W 858 nt9.83□□□□□ -0.84
UBC11P52492 NME1NME1 340 nt9.77□□□□□ -0.85
UBC11P52492 DEP1YAL013W 1218 nt9.75□□□□□ -0.85
UBC11P52492 PET122YER153C 765 nt9.7□□□□□ -0.86
UBC11P52492 RPN10YHR200W 807 nt9.68□□□□□ -0.86
UBC11P52492 BUD23YCR047C 828 nt9.64□□□□□ -0.87
UBC11P52492 SPT5YML010W 3192 nt9.63□□□□□ -0.87
UBC11P52492 PUN1YLR414C 792 nt9.57□□□□□ -0.88
UBC11P52492 YNL208WYNL208W 600 nt9.57□□□□□ -0.88
UBC11P52492 SSA4YER103W 1929 nt9.56□□□□□ -0.88
UBC11P52492 YDJ1YNL064C 1230 nt9.53□□□□□ -0.88
UBC11P52492 SCR1SCR1 522 nt9.52□□□□□ -0.89
UBC11P52492 PTC2YER089C 1395 nt9.5□□□□□ -0.89
UBC11P52492 NAB2YGL122C 1578 nt9.45□□□□□ -0.9
UBC11P52492 YGR139WYGR139W 339 nt9.42□□□□□ -0.9
UBC11P52492 YJR018WYJR018W 363 nt9.41□□□□□ -0.9
UBC11P52492 GAR1YHR089C 618 nt9.39□□□□□ -0.91
UBC11P52492 RRN5YLR141W 1092 nt9.38□□□□□ -0.91
UBC11P52492 BDF1YLR399C 2061 nt9.35□□□□□ -0.91
UBC11P52492 YJL225CYJL225C 5277 nt9.28□□□□□ -0.92
UBC11P52492 MEP2YNL142W 1500 nt9.27□□□□□ -0.93
UBC11P52492 FIS1YIL065C 468 nt9.25□□□□□ -0.93
UBC11P52492 DAL1YIR027C 1383 nt9.24□□□□□ -0.93
UBC11P52492 UME6YDR207C 2511 nt9.24□□□□□ -0.93
UBC11P52492 FPR4YLR449W 1179 nt9.23□□□□□ -0.93
UBC11P52492 YER088W-BYER088W-B 147 nt9.18□□□□□ -0.94
UBC11P52492 TAT1YBR069C 1860 nt9.17□□□□□ -0.94
UBC11P52492 PHO4YFR034C 939 nt9.15□□□□□ -0.94
UBC11P52492 RDN37-1RDN37-1 5354 nt9.15□□□□□ -0.94
UBC11P52492 RDN37-2RDN37-2 5354 nt9.15□□□□□ -0.94
UBC11P52492 INM2YDR287W 879 nt9.14□□□□□ -0.95
UBC11P52492 RPP2BYDR382W 333 nt9.13□□□□□ -0.95
UBC11P52492 YJR120WYJR120W 351 nt9.12□□□□□ -0.95
UBC11P52492 YPS1YLR120C 1710 nt9.11□□□□□ -0.95
UBC11P52492 ATS1YAL020C 1002 nt9.11□□□□□ -0.95
UBC11P52492 TIR1YER011W 765 nt9.1□□□□□ -0.95
UBC11P52492 DCW1YKL046C 1350 nt9.1□□□□□ -0.95
UBC11P52492 RPM1RPM1 483 nt9.09□□□□□ -0.95
UBC11P52492 YHR165W-AYHR165W-A 312 nt9.08□□□□□ -0.96
UBC11P52492 RSB1YOR049C 1065 nt9.08□□□□□ -0.96
UBC11P52492 YMR090WYMR090W 684 nt9.01□□□□□ -0.97
UBC11P52492 EMI2YDR516C 1503 nt9□□□□□ -0.97
UBC11P52492 YDR095CYDR095C 411 nt8.99□□□□□ -0.97
UBC11P52492 YBL100CYBL100C 315 nt8.98□□□□□ -0.97
UBC11P52492 YBR220CYBR220C 1683 nt8.95□□□□□ -0.98
UBC11P52492 YDL221WYDL221W 552 nt8.89□□□□□ -0.99
UBC11P52492 SDH1YKL148C 1923 nt8.86□□□□□ -0.99
UBC11P52492 ALF1YNL148C 765 nt8.85□□□□□ -0.99
UBC11P52492 FUN26YAL022C 1554 nt8.84□□□□□ -0.99
UBC11P52492 BDH2YAL061W 1254 nt8.84□□□□□ -0.99
UBC11P52492 RPP2AYOL039W 321 nt8.84□□□□□ -0.99
UBC11P52492 CAC2YML102W 1407 nt8.82□□□□□ -1
UBC11P52492 CSM2YIL132C 642 nt8.82□□□□□ -1
UBC11P52492 PTP1YDL230W 1008 nt8.8□□□□□ -1
UBC11P52492 SRB2YHR041C 633 nt8.78□□□□□ -1
UBC11P52492 TRM9YML014W 840 nt8.77□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms