RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C CDC27P38042 758 aa5.55□□□□□ -1.52
RAT1YOR048C APN2P38207 520 aa5.55□□□□□ -1.52
RAT1YOR048C GGA2P38817 585 aaKnown RBP5.55□□□□□ -1.52
RAT1YOR048C AVT2P39981 480 aa5.55□□□□□ -1.52
RAT1YOR048C ARO80Q04052 950 aa5.55□□□□□ -1.52
RAT1YOR048C ASA1Q06822 443 aa5.55□□□□□ -1.52
RAT1YOR048C FAP7Q12055 197 aaPredicted RBP5.55□□□□□ -1.52
RAT1YOR048C PCK1P10963 549 aa5.55□□□□□ -1.52
RAT1YOR048C MRPL25P23369 157 aa5.55□□□□□ -1.52
RAT1YOR048C UBP1P25037 809 aa5.55□□□□□ -1.52
RAT1YOR048C SBA1P28707 216 aaKnown RBP5.55□□□□□ -1.52
RAT1YOR048C HEM3P28789 327 aa5.55□□□□□ -1.52
RAT1YOR048C GLN1P32288 370 aaKnown RBP5.55□□□□□ -1.52
RAT1YOR048C ETR1P38071 380 aa5.55□□□□□ -1.52
RAT1YOR048C SLM4P38247 162 aa5.55□□□□□ -1.52
RAT1YOR048C FIS1P40515 155 aa5.55□□□□□ -1.52
RAT1YOR048C GVP36P40531 326 aaKnown RBP5.55□□□□□ -1.52
RAT1YOR048C CHS6P40955 746 aa5.55□□□□□ -1.52
RAT1YOR048C MDJ2P42834 146 aa5.55□□□□□ -1.52
RAT1YOR048C MAD3P47074 515 aa5.55□□□□□ -1.52
RAT1YOR048C YJL007CP47080 104 aa5.55□□□□□ -1.52
RAT1YOR048C GPD1Q00055 391 aaKnown RBP5.55□□□□□ -1.52
RAT1YOR048C YMR209CQ03648 457 aa5.55□□□□□ -1.52
RAT1YOR048C SHS1Q07657 551 aa5.55□□□□□ -1.52
RAT1YOR048C RUP1Q12242 671 aa5.55□□□□□ -1.52
RAT1YOR048C YVC1Q12324 675 aa5.55□□□□□ -1.52
RAT1YOR048C DED1P06634 604 aaKnown RBP5.54□□□□□ -1.52
RAT1YOR048C CDC42P19073 191 aa5.54□□□□□ -1.52
RAT1YOR048C TRX1P22217 103 aaKnown RBP5.54□□□□□ -1.52
RAT1YOR048C RAD14P28519 371 aa5.54□□□□□ -1.52
RAT1YOR048C PCS60P38137 543 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52 RIP-Chip
RAT1YOR048C SPC97P38863 823 aa5.54□□□□□ -1.52
RAT1YOR048C ACA1P39970 489 aa5.54□□□□□ -1.52
RAT1YOR048C RPT2P40327 437 aaKnown RBP5.54□□□□□ -1.52
RAT1YOR048C VMA13P41807 478 aaKnown RBP5.54□□□□□ -1.52
RAT1YOR048C YJL045WP47052 634 aa5.54□□□□□ -1.52
RAT1YOR048C TAN1P53072 289 aaPredicted RBP5.54□□□□□ -1.52
RAT1YOR048C COS6P53344 381 aa5.54□□□□□ -1.52
RAT1YOR048C RPM2Q02773 1202 aa5.54□□□□□ -1.52
RAT1YOR048C YML037CQ03703 340 aa5.54□□□□□ -1.52
RAT1YOR048C ATG16Q03818 150 aa5.54□□□□□ -1.52
RAT1YOR048C HFD1Q04458 532 aa5.54□□□□□ -1.52
RAT1YOR048C IWR1Q07532 353 aaPredicted RBP5.54□□□□□ -1.52
RAT1YOR048C TRE1Q08919 783 aa5.54□□□□□ -1.52
RAT1YOR048C ECM3Q99252 613 aa5.54□□□□□ -1.52
RAT1YOR048C SNF1P06782 633 aaKnown RBP5.54□□□□□ -1.52
RAT1YOR048C EUG1P32474 517 aa5.54□□□□□ -1.52
RAT1YOR048C NIP1P32497 812 aaKnown RBP5.54□□□□□ -1.52
RAT1YOR048C TGL4P36165 910 aa5.54□□□□□ -1.52
RAT1YOR048C NMD3P38861 518 aaKnown RBP5.54□□□□□ -1.52
RAT1YOR048C SPC72P39723 622 aa5.54□□□□□ -1.52
RAT1YOR048C GTT3P39996 337 aa5.54□□□□□ -1.52
RAT1YOR048C ALG5P40350 334 aa5.54□□□□□ -1.52
RAT1YOR048C DPH1P40487 425 aaKnown RBP5.54□□□□□ -1.52
RAT1YOR048C RGD2P43556 714 aa5.54□□□□□ -1.52
RAT1YOR048C PHO86P46956 311 aa5.54□□□□□ -1.52
RAT1YOR048C ACF4P47129 309 aa5.54□□□□□ -1.52
RAT1YOR048C SLU7Q02775 382 aaKnown RBP5.54□□□□□ -1.52
RAT1YOR048C SIN4P32259 974 aa5.53□□□□□ -1.52
RAT1YOR048C MMS21P38632 267 aa5.53□□□□□ -1.52
RAT1YOR048C SHU2P38957 223 aa5.53□□□□□ -1.52
RAT1YOR048C NPT1P39683 429 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C PEA2P40091 420 aa5.53□□□□□ -1.52
RAT1YOR048C FIG4P42837 879 aa5.53□□□□□ -1.52
RAT1YOR048C UBP15P50101 1230 aa5.53□□□□□ -1.52
RAT1YOR048C TAF6P53040 516 aa5.53□□□□□ -1.52
RAT1YOR048C ENO1P00924 437 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C TMT1P32643 299 aa5.53□□□□□ -1.52
RAT1YOR048C TOA1P32773 286 aa5.53□□□□□ -1.52
RAT1YOR048C AST1P35183 429 aa5.53□□□□□ -1.52
RAT1YOR048C NUP120P35729 1037 aa5.53□□□□□ -1.52
RAT1YOR048C EAP1P36041 632 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C YKR078WP36158 585 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C YBL036CP38197 257 aa5.53□□□□□ -1.52
RAT1YOR048C DIA4P38705 446 aaPredicted RBP5.53□□□□□ -1.52
RAT1YOR048C APE4P38821 490 aa5.53□□□□□ -1.52
RAT1YOR048C SCS2P40075 244 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C PDS1P40316 373 aaPredicted RBP5.53□□□□□ -1.52
RAT1YOR048C STB4P50104 949 aa5.53□□□□□ -1.52
RAT1YOR048C NOP15P53927 220 aaPredicted RBP5.53□□□□□ -1.52
RAT1YOR048C GTB1Q04924 702 aa5.53□□□□□ -1.52
RAT1YOR048C YML002WP0CF17 737 aa5.53□□□□□ -1.52
RAT1YOR048C YCR015CP25616 317 aa5.53□□□□□ -1.52
RAT1YOR048C MEI4P29467 408 aa5.53□□□□□ -1.52
RAT1YOR048C ZUO1P32527 433 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C CBF5P33322 483 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
RAT1YOR048C KES1P35844 434 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C PNT1P38969 423 aa5.53□□□□□ -1.52
RAT1YOR048C RPS0BP46654 252 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C COS5P47187 383 aa5.53□□□□□ -1.52
RAT1YOR048C NCS6P53088 359 aa5.53□□□□□ -1.52
RAT1YOR048C ARI1P53111 347 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C ASI2P53895 289 aa5.53□□□□□ -1.52
RAT1YOR048C REX2P54964 269 aaKnown RBP5.53□□□□□ -1.52
RAT1YOR048C TRS130Q03660 1102 aa5.53□□□□□ -1.52
RAT1YOR048C IVY1Q04934 453 aa5.53□□□□□ -1.52
RAT1YOR048C YRR1Q12172 810 aa5.53□□□□□ -1.52
RAT1YOR048C NTO1Q12311 748 aa5.53□□□□□ -1.52
RAT1YOR048C AIM26P32858 118 aa5.52□□□□□ -1.53
RAT1YOR048C DYS1P38791 387 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms