Protein–RNA interactions for Protein: P38957

SHU2, Suppressor of hydroxyurea sensitivity protein 2, yeastyeast

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHU2P38957 NSR1YGR159C 1245 nt20.11■□□□□ 0.81
SHU2P38957 YML009W-BYML009W-B 477 nt19.86■□□□□ 0.77
SHU2P38957 NOP1YDL014W 984 nt19.22■□□□□ 0.67
SHU2P38957 MDJ1YFL016C 1536 nt18.11■□□□□ 0.49
SHU2P38957 YKL036CYKL036C 393 nt17.43■□□□□ 0.38
SHU2P38957 SRX1YKL086W 384 nt16.82■□□□□ 0.28
SHU2P38957 Q0297Q0297 156 nt16.77■□□□□ 0.28
SHU2P38957 YJL027CYJL027C 417 nt16.68■□□□□ 0.26
SHU2P38957 DBP2YNL112W 1641 nt15.95■□□□□ 0.14
SHU2P38957 YCR051WYCR051W 669 nt15.84■□□□□ 0.13
SHU2P38957 SCS3YGL126W 1143 nt15.69■□□□□ 0.1
SHU2P38957 YBR190WYBR190W 312 nt15.58■□□□□ 0.08
SHU2P38957 TRN1tP(UGG)A 72 nt15.42■□□□□ 0.06
SHU2P38957 SUF9tP(UGG)F 72 nt15.42■□□□□ 0.06
SHU2P38957 SUF8tP(UGG)H 72 nt15.42■□□□□ 0.06
SHU2P38957 tP(UGG)LtP(UGG)L 72 nt15.42■□□□□ 0.06
SHU2P38957 SUF7tP(UGG)M 72 nt15.42■□□□□ 0.06
SHU2P38957 tP(UGG)N1tP(UGG)N1 72 nt15.42■□□□□ 0.06
SHU2P38957 tP(UGG)N2tP(UGG)N2 72 nt15.42■□□□□ 0.06
SHU2P38957 tP(UGG)O1tP(UGG)O1 72 nt15.42■□□□□ 0.06
SHU2P38957 SUF11tP(UGG)O2 72 nt15.42■□□□□ 0.06
SHU2P38957 CCC1YLR220W 969 nt15.14■□□□□ 0.01
SHU2P38957 YOL085CYOL085C 342 nt15.12■□□□□ 0.01
SHU2P38957 RTC3YHR087W 336 nt15.11■□□□□ 0.01
SHU2P38957 RPP1BYDL130W 321 nt15.02■□□□□ -0
SHU2P38957 RVS167YDR388W 1449 nt14.86□□□□□ -0.03
SHU2P38957 PKP1YIL042C 1185 nt14.85□□□□□ -0.03
SHU2P38957 SCJ1YMR214W 1134 nt14.77□□□□□ -0.05
SHU2P38957 tP(UGG)O3tP(UGG)O3 72 nt14.44□□□□□ -0.1
SHU2P38957 PUT4YOR348C 1884 nt14.42□□□□□ -0.1
SHU2P38957 PET122YER153C 765 nt14.37□□□□□ -0.11
SHU2P38957 SHR5YOL110W 714 nt14.31□□□□□ -0.12
SHU2P38957 SSA3YBL075C 1950 nt14.24□□□□□ -0.13
SHU2P38957 SCR1SCR1 522 nt14.1□□□□□ -0.15
SHU2P38957 URN1YPR152C 1398 nt14.08□□□□□ -0.16
SHU2P38957 ARE1YCR048W 1833 nt14.04□□□□□ -0.16
SHU2P38957 YDJ1YNL064C 1230 nt14.02□□□□□ -0.17
SHU2P38957 OPI9YLR338W 858 nt13.98□□□□□ -0.17
SHU2P38957 ATS1YAL020C 1002 nt13.94□□□□□ -0.18
SHU2P38957 SAH1YER043C 1350 nt13.94□□□□□ -0.18
SHU2P38957 DEP1YAL013W 1218 nt13.93□□□□□ -0.18
SHU2P38957 Q0182Q0182 405 nt13.91□□□□□ -0.18
SHU2P38957 RRN5YLR141W 1092 nt13.9□□□□□ -0.18
SHU2P38957 POA1YBR022W 534 nt13.87□□□□□ -0.19
SHU2P38957 YHR049C-AYHR049C-A 297 nt13.82□□□□□ -0.2
SHU2P38957 RPN10YHR200W 807 nt13.8□□□□□ -0.2
SHU2P38957 YNL208WYNL208W 600 nt13.74□□□□□ -0.21
SHU2P38957 GAR1YHR089C 618 nt13.67□□□□□ -0.22
SHU2P38957 BSC6YOL137W 1494 nt13.67□□□□□ -0.22
SHU2P38957 YER088W-BYER088W-B 147 nt13.65□□□□□ -0.22
SHU2P38957 PUN1YLR414C 792 nt13.56□□□□□ -0.24
SHU2P38957 MOT3YMR070W 1473 nt13.51□□□□□ -0.25
SHU2P38957 RSB1YOR049C 1065 nt13.49□□□□□ -0.25
SHU2P38957 BUD23YCR047C 828 nt13.42□□□□□ -0.26
SHU2P38957 PTC2YER089C 1395 nt13.42□□□□□ -0.26
SHU2P38957 YJR018WYJR018W 363 nt13.41□□□□□ -0.26
SHU2P38957 SPT5YML010W 3192 nt13.38□□□□□ -0.27
SHU2P38957 NAB2YGL122C 1578 nt13.32□□□□□ -0.28
SHU2P38957 TIR1YER011W 765 nt13.26□□□□□ -0.29
SHU2P38957 YJR120WYJR120W 351 nt13.21□□□□□ -0.29
SHU2P38957 SSA1YAL005C 1929 nt13.19□□□□□ -0.3
SHU2P38957 FIS1YIL065C 468 nt13.14□□□□□ -0.31
SHU2P38957 DAL1YIR027C 1383 nt13.08□□□□□ -0.31
SHU2P38957 RPP2BYDR382W 333 nt13.03□□□□□ -0.32
SHU2P38957 PST2YDR032C 597 nt13□□□□□ -0.33
SHU2P38957 INM2YDR287W 879 nt13□□□□□ -0.33
SHU2P38957 SSA4YER103W 1929 nt12.98□□□□□ -0.33
SHU2P38957 PHO4YFR034C 939 nt12.96□□□□□ -0.33
SHU2P38957 FPR4YLR449W 1179 nt12.94□□□□□ -0.34
SHU2P38957 SRB2YHR041C 633 nt12.92□□□□□ -0.34
SHU2P38957 MEP2YNL142W 1500 nt12.88□□□□□ -0.35
SHU2P38957 YPS1YLR120C 1710 nt12.85□□□□□ -0.35
SHU2P38957 YBL100CYBL100C 315 nt12.8□□□□□ -0.36
SHU2P38957 BDH2YAL061W 1254 nt12.76□□□□□ -0.37
SHU2P38957 YDR095CYDR095C 411 nt12.73□□□□□ -0.37
SHU2P38957 YHR165W-AYHR165W-A 312 nt12.66□□□□□ -0.38
SHU2P38957 FUN26YAL022C 1554 nt12.65□□□□□ -0.38
SHU2P38957 DCW1YKL046C 1350 nt12.65□□□□□ -0.38
SHU2P38957 WWM1YFL010C 636 nt12.61□□□□□ -0.39
SHU2P38957 LSM3YLR438C-A 270 nt12.56□□□□□ -0.4
SHU2P38957 BDF1YLR399C 2061 nt12.55□□□□□ -0.4
SHU2P38957 TRM9YML014W 840 nt12.53□□□□□ -0.4
SHU2P38957 SHU1YHL006C 453 nt12.52□□□□□ -0.41
SHU2P38957 CCT6YDR188W 1641 nt12.49□□□□□ -0.41
SHU2P38957 EMI2YDR516C 1503 nt12.49□□□□□ -0.41
SHU2P38957 PTP1YDL230W 1008 nt12.49□□□□□ -0.41
SHU2P38957 ALF1YNL148C 765 nt12.49□□□□□ -0.41
SHU2P38957 YGR021WYGR021W 873 nt12.47□□□□□ -0.41
SHU2P38957 YFL021C-AYFL021C-A 855 nt12.46□□□□□ -0.41
SHU2P38957 RPP2AYOL039W 321 nt12.46□□□□□ -0.41
SHU2P38957 HOM6YJR139C 1080 nt12.43□□□□□ -0.42
SHU2P38957 CAC2YML102W 1407 nt12.4□□□□□ -0.42
SHU2P38957 YDL221WYDL221W 552 nt12.4□□□□□ -0.42
SHU2P38957 YMR090WYMR090W 684 nt12.4□□□□□ -0.42
SHU2P38957 SIS1YNL007C 1059 nt12.4□□□□□ -0.42
SHU2P38957 YBR220CYBR220C 1683 nt12.39□□□□□ -0.43
SHU2P38957 TAT1YBR069C 1860 nt12.39□□□□□ -0.43
SHU2P38957 SUF2tP(AGG)C 72 nt12.37□□□□□ -0.43
SHU2P38957 SUF10tP(AGG)N 72 nt12.37□□□□□ -0.43
SHU2P38957 YAL037C-BYAL037C-B 975 nt12.36□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms